RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 IVNS1ABPQ9Y6Y0 642 aa17.01■□□□□ 0.31
HCFC1-201ENST00000310441 PUM3Q15397 648 aaKnown RBP17.01■□□□□ 0.31
HCFC1-201ENST00000310441 EMILIN1Q9Y6C2 1016 aa17.01■□□□□ 0.31
HCFC1-201ENST00000310441 TYW5A2RUC4 315 aaKnown RBP17.01■□□□□ 0.31
HCFC1-201ENST00000310441 KPNA2P52292 529 aaKnown RBP17.01■□□□□ 0.31
HCFC1-201ENST00000310441 RAB44Q7Z6P3 723 aaPredicted RBP17.01■□□□□ 0.31
HCFC1-201ENST00000310441 SEPT8Q92599 483 aa17.01■□□□□ 0.31
HCFC1-201ENST00000310441 STK38LQ9Y2H1 464 aa17.01■□□□□ 0.31
HCFC1-201ENST00000310441 GOLGA4Q13439 2230 aaKnown RBP17.01■□□□□ 0.31
HCFC1-201ENST00000310441 TTI1O43156 1089 aa17.01■□□□□ 0.31
HCFC1-201ENST00000310441 OATP04181 439 aa17.01■□□□□ 0.31
HCFC1-201ENST00000310441 NXNQ6DKJ4 435 aa17.01■□□□□ 0.31
HCFC1-201ENST00000310441 TTC1Q99614 292 aa17.01■□□□□ 0.31
HCFC1-201ENST00000310441 RABEP2Q9H5N1 569 aa17.01■□□□□ 0.31
HCFC1-201ENST00000310441 SPATS2LQ9NUQ6 558 aaKnown RBP17.01■□□□□ 0.31
HCFC1-201ENST00000310441 PFDN1O60925 122 aa17.01■□□□□ 0.31
HCFC1-201ENST00000310441 CCHCR1Q8TD31 782 aa17.01■□□□□ 0.31
HCFC1-201ENST00000310441 PASKQ96RG2 1323 aa17.01■□□□□ 0.31
HCFC1-201ENST00000310441 SRRM1Q8IYB3 904 aaKnown RBP17■□□□□ 0.31
HCFC1-201ENST00000310441 POLD1P28340 1107 aa17■□□□□ 0.31
HCFC1-201ENST00000310441 WAPLQ7Z5K2 1190 aa17■□□□□ 0.31
HCFC1-201ENST00000310441 RAD51AP2Q09MP3 1159 aa17■□□□□ 0.31
HCFC1-201ENST00000310441 ESYT2A0FGR8 921 aa17■□□□□ 0.31
HCFC1-201ENST00000310441 ZSCAN26Q16670 478 aa17■□□□□ 0.31
HCFC1-201ENST00000310441 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
HCFC1-201ENST00000310441 ADCY7P51828 1080 aa17■□□□□ 0.31
HCFC1-201ENST00000310441 VPS16Q9H269 839 aa17■□□□□ 0.31
HCFC1-201ENST00000310441 ANGPTL3Q9Y5C1 460 aa17■□□□□ 0.31
HCFC1-201ENST00000310441 SART1O43290 800 aaKnown RBP17■□□□□ 0.31
HCFC1-201ENST00000310441 TRIM68Q6AZZ1 485 aa17■□□□□ 0.31
HCFC1-201ENST00000310441 MAGEF1Q9HAY2 307 aa17■□□□□ 0.31
HCFC1-201ENST00000310441 ELF2Q15723 593 aa17■□□□□ 0.31
HCFC1-201ENST00000310441 PRPF38AQ8NAV1 312 aaKnown RBP17■□□□□ 0.31
HCFC1-201ENST00000310441 RTCBQ9Y3I0 505 aaKnown RBP17■□□□□ 0.31
HCFC1-201ENST00000310441 SOS2Q07890 1332 aaPredicted RBP16.99■□□□□ 0.31
HCFC1-201ENST00000310441 ADAMTS2O95450 1211 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 NELFBQ8WX92 580 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 NOS1P29475 1434 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 PYGLP06737 847 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 TTLL3Q9Y4R7 772 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 MYCT1Q8N699 235 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 DCTPP1Q9H773 170 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 PARP3Q9Y6F1 533 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 FLT4P35916 1363 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 EXOC3O60645 756 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 TTC38Q5R3I4 469 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 ZNF449Q6P9G9 518 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 ANAPC5Q9UJX4 755 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 PDCD7Q8N8D1 485 aaKnown RBP16.99■□□□□ 0.31
HCFC1-201ENST00000310441 TRIM31Q9BZY9 425 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 APOEP02649 317 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 CAPS2Q9BXY5 557 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 IFT122Q9HBG6 1241 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 RIPOR2Q9Y4F9 1068 aa16.99■□□□□ 0.31
HCFC1-201ENST00000310441 IL9RQ01113 521 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 SLFN12Q8IYM2 578 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 REXO1Q8N1G1 1221 aaKnown RBP16.98■□□□□ 0.31
HCFC1-201ENST00000310441 KIFC3Q9BVG8 833 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 EFCAB8A8MWE9 144 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 KRIT1O00522 736 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 LONRF2Q1L5Z9 754 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 KRT28Q7Z3Y7 464 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 PCDHB13Q9Y5F0 798 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 F8W031 263 aaPredicted RBP16.98■□□□□ 0.31
HCFC1-201ENST00000310441 MRRFQ96E11 262 aaKnown RBP16.98■□□□□ 0.31
HCFC1-201ENST00000310441 TRIM11Q96F44 468 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 MEIS3Q99687 375 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 HARSP12081 509 aaKnown RBP16.98■□□□□ 0.31
HCFC1-201ENST00000310441 KRT10P13645 584 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 NBPF14Q5TI25 921 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 PPP2R5CQ13362 524 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 ZNF174Q15697 407 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 TTC25Q96NG3 672 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 CENPKQ9BS16 269 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 TXLNGQ9NUQ3 528 aa16.98■□□□□ 0.31
HCFC1-201ENST00000310441 PLCH2O75038 1416 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 PCDH11XQ9BZA7 1347 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 PCDH11YQ9BZA8 1340 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 BIVM-ERCC5R4GMW8 1640 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 ZMYM4Q5VZL5 1548 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 CTAGE3PQ8IX95 158 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 LRRC8CQ8TDW0 803 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 CAPN7Q9Y6W3 813 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 TEKT2Q9UIF3 430 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 MAGEA1P43355 309 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 MAP3K7CLP57077 242 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 LMBR1LQ6UX01 489 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 MRPL46Q9H2W6 279 aaKnown RBP16.97■□□□□ 0.31
HCFC1-201ENST00000310441 FOXO3O43524 673 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 ADCY8P40145 1251 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 BABAM1Q9NWV8 329 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 SCINQ9Y6U3 715 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 ARHGEF12Q9NZN5 1544 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 PDE6CP51160 858 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 TMTC3Q6ZXV5 915 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 MX2P20592 715 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 RSBN1LQ6PCB5 846 aaPredicted RBP16.97■□□□□ 0.31
HCFC1-201ENST00000310441 TRIM15Q9C019 465 aa16.97■□□□□ 0.31
HCFC1-201ENST00000310441 FANCAO15360 1455 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms