RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 SNCBQ16143 134 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 MEA1Q16626 185 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 C11orf91Q3C1V1 193 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 ISM2Q6H9L7 571 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 CCDC129Q6ZRS4 1044 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 RIC3Q7Z5B4 369 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 CAGE1Q8TC20 777 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 LRRC2Q9BYS8 371 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 BSDC1Q9NW68 430 aaPredicted RBP6.04□□□□□ -1.44
USP8-201ENST00000307179 PAPPAQ13219 1627 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 UBN2Q6ZU65 1347 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 PLCH1Q4KWH8 1693 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 A0A1W2PQJ5 194 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 AGPSO00116 658 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 MARCKSP29966 332 aaPredicted RBP6.04□□□□□ -1.44
USP8-201ENST00000307179 CASP14P31944 242 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 IARSP41252 1262 aaKnown RBP6.04□□□□□ -1.44
USP8-201ENST00000307179 FOSBP53539 338 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 SSRP1Q08945 709 aaKnown RBP6.04□□□□□ -1.44
USP8-201ENST00000307179 FIGNQ5HY92 759 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 LRCH2Q5VUJ6 765 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 OR8K1Q8NGG5 319 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 APPBP2Q92624 585 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 MIEF2Q96C03 454 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.04□□□□□ -1.44
USP8-201ENST00000307179 ZSWIM4Q9H7M6 989 aa6.04□□□□□ -1.44
USP8-201ENST00000307179 GLI3P10071 1580 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 ANKRD36CQ5JPF3 1778 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 BCORQ6W2J9 1755 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 LIN7AO14910 233 aaPredicted RBP6.03□□□□□ -1.44
USP8-201ENST00000307179 RASSF9O75901 435 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 MMP1P03956 469 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 COPB1P53618 953 aaKnown RBP6.03□□□□□ -1.44
USP8-201ENST00000307179 CWF19L2Q2TBE0 894 aaKnown RBP6.03□□□□□ -1.44
USP8-201ENST00000307179 SLC9C2Q5TAH2 1124 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 ZNF530Q6P9A1 599 aaPredicted RBP6.03□□□□□ -1.44
USP8-201ENST00000307179 KIAA1328Q86T90 577 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 TRIM22Q8IYM9 498 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 NGDNQ8NEJ9 315 aaKnown RBP6.03□□□□□ -1.44
USP8-201ENST00000307179 WHAMMQ8TF30 809 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 JAKMIP2Q96AA8 810 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 CNNM2Q9H8M5 875 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 KLC4Q9NSK0 619 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 MYH1P12882 1939 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 PXDNQ92626 1479 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 ALS2Q96Q42 1657 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 GRID2IPA4D2P6 1211 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 IGKV5-2P06315 115 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 ERVK-24P63145 666 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 GOLGA8FQ08AF8 430 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 GOLGA8DPQ0D2H9 430 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 PAK2Q13177 524 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 MTF1Q14872 753 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 ALX1Q15699 326 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 LACTB2Q53H82 288 aaPredicted RBP6.03□□□□□ -1.44
USP8-201ENST00000307179 CEP85LQ5SZL2 805 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 IQCA1Q86XH1 822 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 ZKSCAN4Q969J2 545 aaPredicted RBP6.03□□□□□ -1.44
USP8-201ENST00000307179 HOOK2Q96ED9 719 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 ZNF512BQ96KM6 892 aaPredicted RBP6.03□□□□□ -1.44
USP8-201ENST00000307179 ALS2CR12Q96Q35 445 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 CDC5LQ99459 802 aaKnown RBP6.03□□□□□ -1.44
USP8-201ENST00000307179 NUP88Q99567 741 aaPredicted RBP6.03□□□□□ -1.44
USP8-201ENST00000307179 DBNDD2Q9BQY9 259 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 CAPN11Q9UMQ6 739 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 NCKAP5LQ9HCH0 1330 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 ATAD5Q96QE3 1844 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 H7C1D1 291 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 USO1O60763 962 aaKnown RBP6.03□□□□□ -1.44
USP8-201ENST00000307179 TACC1O75410 805 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 IFNAR1P17181 557 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 XBP1P17861 261 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 CDC27P30260 824 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 E2F4Q16254 413 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 CCDC40Q4G0X9 1142 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 FOXP4Q8IVH2 680 aaPredicted RBP6.03□□□□□ -1.44
USP8-201ENST00000307179 FAM114A1Q8IWE2 563 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 THAP9Q9H5L6 903 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 SAMSN1Q9NSI8 373 aaKnown RBP6.03□□□□□ -1.44
USP8-201ENST00000307179 SERTAD1Q9UHV2 236 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 AKAP11Q9UKA4 1901 aa6.03□□□□□ -1.44
USP8-201ENST00000307179 ZNF213O14771 459 aa6.02□□□□□ -1.45
USP8-201ENST00000307179 PHACTR2O75167 634 aa6.02□□□□□ -1.45
USP8-201ENST00000307179 FAM107AO95990 144 aa6.02□□□□□ -1.45
USP8-201ENST00000307179 GSTA1P08263 222 aa6.02□□□□□ -1.45
USP8-201ENST00000307179 IFIT1P09914 478 aaKnown RBP6.02□□□□□ -1.45
USP8-201ENST00000307179 ANTXR2P58335 489 aa6.02□□□□□ -1.45
USP8-201ENST00000307179 DPYDQ12882 1025 aa6.02□□□□□ -1.45
USP8-201ENST00000307179 TTF1Q15361 905 aaPredicted RBP6.02□□□□□ -1.45
USP8-201ENST00000307179 SPDYCQ5MJ68 293 aa6.02□□□□□ -1.45
USP8-201ENST00000307179 CRELD2Q6UXH1 353 aaPredicted RBP6.02□□□□□ -1.45
USP8-201ENST00000307179 DDX46Q7L014 1031 aaKnown RBP6.02□□□□□ -1.45
USP8-201ENST00000307179 IFT20Q8IY31 132 aa6.02□□□□□ -1.45
USP8-201ENST00000307179 STK11IPQ8N1F8 1099 aa6.02□□□□□ -1.45
USP8-201ENST00000307179 MAB21L3Q8N8X9 362 aa6.02□□□□□ -1.45
USP8-201ENST00000307179 NEUROD6Q96NK8 337 aa6.02□□□□□ -1.45
USP8-201ENST00000307179 MAGEF1Q9HAY2 307 aa6.02□□□□□ -1.45
USP8-201ENST00000307179 HOMER3Q9NSC5 361 aa6.02□□□□□ -1.45
USP8-201ENST00000307179 ODF2LQ9ULJ1 636 aa6.02□□□□□ -1.45
USP8-201ENST00000307179 HYOU1Q9Y4L1 999 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms