RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 PDIA3P30101 505 aaKnown RBP17.73■□□□□ 0.43
CCDC140-201ENST00000295226 HUNKP57058 714 aa17.73■□□□□ 0.43
CCDC140-201ENST00000295226 FKBP1BP68106 108 aa17.73■□□□□ 0.43
CCDC140-201ENST00000295226 CCT2P78371 535 aaKnown RBP17.73■□□□□ 0.43
CCDC140-201ENST00000295226 FSTL1Q12841 308 aa17.73■□□□□ 0.43
CCDC140-201ENST00000295226 ANKRD1Q15327 319 aa17.73■□□□□ 0.43
CCDC140-201ENST00000295226 APOA5Q6Q788 366 aa17.73■□□□□ 0.43
CCDC140-201ENST00000295226 MICU3Q86XE3 530 aa17.73■□□□□ 0.43
CCDC140-201ENST00000295226 SPICE1Q8N0Z3 855 aa17.73■□□□□ 0.43
CCDC140-201ENST00000295226 TMTC2Q8N394 836 aa17.73■□□□□ 0.43
CCDC140-201ENST00000295226 MKL1Q969V6 931 aa17.73■□□□□ 0.43
CCDC140-201ENST00000295226 ARHGEF10LQ9HCE6 1279 aa17.73■□□□□ 0.43
CCDC140-201ENST00000295226 GOLGA8BA8MQT2 603 aa17.72■□□□□ 0.43
CCDC140-201ENST00000295226 GJA5P36382 358 aa17.72■□□□□ 0.43
CCDC140-201ENST00000295226 MKRN3Q13064 507 aaKnown RBP17.72■□□□□ 0.43
CCDC140-201ENST00000295226 CATIPQ7Z7H3 387 aa17.72■□□□□ 0.43
CCDC140-201ENST00000295226 OPTNQ96CV9 577 aa17.72■□□□□ 0.43
CCDC140-201ENST00000295226 FEZ1Q99689 392 aa17.72■□□□□ 0.43
CCDC140-201ENST00000295226 TBC1D2Q9BYX2 928 aa17.72■□□□□ 0.43
CCDC140-201ENST00000295226 NCOA5Q9HCD5 579 aaKnown RBP17.72■□□□□ 0.43
CCDC140-201ENST00000295226 GINM1Q9NU53 330 aa17.72■□□□□ 0.43
CCDC140-201ENST00000295226 HPS5Q9UPZ3 1129 aa17.72■□□□□ 0.43
CCDC140-201ENST00000295226 AFG3L2Q9Y4W6 797 aa17.72■□□□□ 0.43
CCDC140-201ENST00000295226 PHIPQ8WWQ0 1821 aa17.72■□□□□ 0.43
CCDC140-201ENST00000295226 MTMR2Q13614 643 aa17.71■□□□□ 0.43
CCDC140-201ENST00000295226 ZNF280CQ8ND82 737 aa17.71■□□□□ 0.43
CCDC140-201ENST00000295226 SNX21Q969T3 373 aa17.71■□□□□ 0.43
CCDC140-201ENST00000295226 NUP88Q99567 741 aaPredicted RBP17.71■□□□□ 0.43
CCDC140-201ENST00000295226 TMX2Q9Y320 296 aa17.71■□□□□ 0.43
CCDC140-201ENST00000295226 F5H6K3 240 aa17.71■□□□□ 0.42
CCDC140-201ENST00000295226 IRF6O14896 467 aa17.71■□□□□ 0.42
CCDC140-201ENST00000295226 ZBTB43O43298 467 aa17.71■□□□□ 0.42
CCDC140-201ENST00000295226 EVCP57679 992 aa17.71■□□□□ 0.42
CCDC140-201ENST00000295226 KLRC3Q07444 240 aa17.71■□□□□ 0.42
CCDC140-201ENST00000295226 TROAPQ12815 778 aa17.71■□□□□ 0.42
CCDC140-201ENST00000295226 USP17L2Q6R6M4 530 aa17.71■□□□□ 0.42
CCDC140-201ENST00000295226 SYNE3Q6ZMZ3 975 aa17.71■□□□□ 0.42
CCDC140-201ENST00000295226 SAPCD2Q86UD0 394 aa17.71■□□□□ 0.42
CCDC140-201ENST00000295226 ERO1BQ86YB8 467 aa17.71■□□□□ 0.42
CCDC140-201ENST00000295226 TMX3Q96JJ7 454 aa17.71■□□□□ 0.42
CCDC140-201ENST00000295226 WDR18Q9BV38 432 aa17.71■□□□□ 0.42
CCDC140-201ENST00000295226 SPDYE5A6NIY4 337 aa17.7■□□□□ 0.42
CCDC140-201ENST00000295226 TMEM88BA6NKF7 163 aa17.7■□□□□ 0.42
CCDC140-201ENST00000295226 PPFIA3O75145 1194 aa17.7■□□□□ 0.42
CCDC140-201ENST00000295226 NDUFB10O96000 172 aa17.7■□□□□ 0.42
CCDC140-201ENST00000295226 GOLGA8HP0CJ92 632 aa17.7■□□□□ 0.42
CCDC140-201ENST00000295226 SLC4A3P48751 1232 aa17.7■□□□□ 0.42
CCDC140-201ENST00000295226 SLFN13Q68D06 897 aa17.7■□□□□ 0.42
CCDC140-201ENST00000295226 AS3MTQ9HBK9 375 aa17.7■□□□□ 0.42
CCDC140-201ENST00000295226 ABT1Q9ULW3 272 aaKnown RBP17.7■□□□□ 0.42
CCDC140-201ENST00000295226 FRMPD2Q68DX3 1309 aaPredicted RBP17.7■□□□□ 0.42
CCDC140-201ENST00000295226 USP17L10C9JJH3 530 aa17.69■□□□□ 0.42
CCDC140-201ENST00000295226 CDC27P30260 824 aa17.69■□□□□ 0.42
CCDC140-201ENST00000295226 ADD1P35611 737 aaKnown RBP17.69■□□□□ 0.42
CCDC140-201ENST00000295226 HMGCS2P54868 508 aa17.69■□□□□ 0.42
CCDC140-201ENST00000295226 ST3GAL1Q11201 340 aa17.69■□□□□ 0.42
CCDC140-201ENST00000295226 SCRN1Q12765 414 aa17.69■□□□□ 0.42
CCDC140-201ENST00000295226 PPP4R3BQ5MIZ7 849 aa17.69■□□□□ 0.42
CCDC140-201ENST00000295226 HSCBQ8IWL3 235 aa17.69■□□□□ 0.42
CCDC140-201ENST00000295226 CMTR1Q8N1G2 835 aaKnown RBP17.69■□□□□ 0.42
CCDC140-201ENST00000295226 STAG2Q8N3U4 1231 aa17.69■□□□□ 0.42
CCDC140-201ENST00000295226 ZNF274Q96GC6 653 aaPredicted RBP17.69■□□□□ 0.42
CCDC140-201ENST00000295226 SLKQ9H2G2 1235 aaPredicted RBP17.69■□□□□ 0.42
CCDC140-201ENST00000295226 EMILIN3Q9NT22 766 aa17.69■□□□□ 0.42
CCDC140-201ENST00000295226 FAM217BQ9NTX9 383 aaPredicted RBP17.69■□□□□ 0.42
CCDC140-201ENST00000295226 GOLGA8AA7E2F4 631 aa17.68■□□□□ 0.42
CCDC140-201ENST00000295226 PDHBP11177 359 aa17.68■□□□□ 0.42
CCDC140-201ENST00000295226 MCM2P49736 904 aa17.68■□□□□ 0.42
CCDC140-201ENST00000295226 METAP2P50579 478 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCDC140-201ENST00000295226 BACE1P56817 501 aa17.68■□□□□ 0.42
CCDC140-201ENST00000295226 PPATQ06203 517 aa17.68■□□□□ 0.42
CCDC140-201ENST00000295226 KCTD1Q719H9 257 aa17.68■□□□□ 0.42
CCDC140-201ENST00000295226 FANCBQ8NB91 859 aa17.68■□□□□ 0.42
CCDC140-201ENST00000295226 KIAA1683Q9H0B3 1180 aa17.68■□□□□ 0.42
CCDC140-201ENST00000295226 CPVLQ9H3G5 476 aa17.68■□□□□ 0.42
CCDC140-201ENST00000295226 GPCPD1Q9NPB8 672 aa17.68■□□□□ 0.42
CCDC140-201ENST00000295226 ISY1Q9ULR0 285 aaKnown RBP17.68■□□□□ 0.42
CCDC140-201ENST00000295226 TLL2Q9Y6L7 1015 aa17.68■□□□□ 0.42
CCDC140-201ENST00000295226 K7ELQ4 463 aaPredicted RBP17.67■□□□□ 0.42
CCDC140-201ENST00000295226 PFKFB2O60825 505 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 ZNF157P51786 506 aaPredicted RBP17.67■□□□□ 0.42
CCDC140-201ENST00000295226 CCDC83Q8IWF9 413 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 CCDC82Q8N4S0 544 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 SPRYD3Q8NCJ5 442 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 WNK4Q96J92 1243 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 VCPKMTQ9H867 229 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 FOXD4L1Q9NU39 408 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 DDAH1O94760 285 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 PPIL2Q13356 520 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 GRM4Q14833 912 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 RTN1Q16799 776 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 CCDC96Q2M329 555 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 TTBK2Q6IQ55 1244 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 GMCL1P1Q8NEA9 526 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 ZSCAN31Q96LW9 406 aaPredicted RBP17.67■□□□□ 0.42
CCDC140-201ENST00000295226 GOPCQ9HD26 462 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 MAD2L2Q9UI95 211 aa17.67■□□□□ 0.42
CCDC140-201ENST00000295226 BAZ2BQ9UIF8 2168 aaKnown RBP17.67■□□□□ 0.42
CCDC140-201ENST00000295226 UNCXA6NJT0 531 aa17.66■□□□□ 0.42
CCDC140-201ENST00000295226 PLEKHA8P1O95397 391 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms