RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 NR1I2O75469 434 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 ATXN8OSP0DMR3 200 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 STMN1P16949 149 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 RASIP1Q5U651 963 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 AFAP1L2Q8N4X5 818 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 ZNF408Q9H9D4 720 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 NUCKS1Q9H1E3 243 aaKnown RBP17.81■□□□□ 0.44
SSRP1-202ENST00000293880 ANLNQ9NQW6 1124 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 TMEM63CQ9P1W3 806 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 LRWD1Q9UFC0 647 aa17.81■□□□□ 0.44
SSRP1-202ENST00000293880 RBM17Q96I25 401 aaKnown RBP17.8■□□□□ 0.44
SSRP1-202ENST00000293880 ATP10BO94823 1461 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 GIPC1O14908 333 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 CD19P15391 556 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 LINS1Q8NG48 757 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 RSAD2Q8WXG1 361 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 UNC13AQ9UPW8 1703 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 ABCC1P33527 1531 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 RNMTO43148 476 aaKnown RBP17.8■□□□□ 0.44
SSRP1-202ENST00000293880 HAUS3Q68CZ6 603 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 SCYL2Q6P3W7 929 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 PHLDB2Q86SQ0 1253 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 TPH2Q8IWU9 490 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 WDR7Q9Y4E6 1490 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 MGEA5O60502 916 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 PRPF6O94906 941 aaKnown RBP17.8■□□□□ 0.44
SSRP1-202ENST00000293880 SLC8A3P57103 927 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 IFRD2Q12894 506 aaPredicted RBP17.8■□□□□ 0.44
SSRP1-202ENST00000293880 TMTC1Q8IUR5 882 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 SCYL1Q96KG9 808 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 DENND2AQ9ULE3 1009 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 KCNJ18B7U540 433 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 PLCG2P16885 1265 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 KCNJ12Q14500 433 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 ZNF827Q17R98 1081 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 KRT40Q6A162 431 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 DCLK2Q8N568 766 aa17.8■□□□□ 0.44
SSRP1-202ENST00000293880 E2F5Q15329 346 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 KCTD16Q68DU8 428 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 NACA2Q9H009 215 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 RIMS2Q9UQ26 1411 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 A2MP01023 1474 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 CASP2P42575 452 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 GABPB1Q06547 395 aaPredicted RBP17.79■□□□□ 0.44
SSRP1-202ENST00000293880 FAM102BQ5T8I3 360 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 MAGED2Q9UNF1 606 aaPredicted RBP17.79■□□□□ 0.44
SSRP1-202ENST00000293880 PCDHB13Q9Y5F0 798 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 PLCH2O75038 1416 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 KRIT1O00522 736 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 MORC3Q14149 939 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 NAA35Q5VZE5 725 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 RSPH3Q86UC2 560 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 SEPT8Q92599 483 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 RAB3IPQ96QF0 476 aaPredicted RBP17.79■□□□□ 0.44
SSRP1-202ENST00000293880 ANGEL1Q9UNK9 670 aaKnown RBP17.79■□□□□ 0.44
SSRP1-202ENST00000293880 EXOC7Q9UPT5 735 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 DBN1Q16643 649 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 SYCE1Q8N0S2 351 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 STAG1Q8WVM7 1258 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 PPME1Q9Y570 386 aa17.79■□□□□ 0.44
SSRP1-202ENST00000293880 NOP56O00567 594 aaKnown RBP17.78■□□□□ 0.44
SSRP1-202ENST00000293880 PPP1R12AO14974 1030 aaPredicted RBP17.78■□□□□ 0.44
SSRP1-202ENST00000293880 ADCY8P40145 1251 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 MTMR3Q13615 1198 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 KRT81Q14533 505 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 CPXCR1Q8N123 301 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 ANKRD2Q9GZV1 360 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 TUBBP07437 444 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 ANKRD20A3Q5VUR7 823 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 RTCBQ9Y3I0 505 aaKnown RBP17.78■□□□□ 0.44
SSRP1-202ENST00000293880 PNMA6EA0A0J9YXQ4 647 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 CLTAP09496 248 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 NBPF14Q5TI25 921 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 MAPKAPK5Q8IW41 473 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 NAP1L4Q99733 375 aaKnown RBP17.78■□□□□ 0.44
SSRP1-202ENST00000293880 DNM3Q9UQ16 869 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 GNPATO15228 680 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 ME3Q16798 604 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 ATL3Q6DD88 541 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 SUCLG2Q96I99 432 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 SPATS2LQ9NUQ6 558 aaKnown RBP17.78■□□□□ 0.44
SSRP1-202ENST00000293880 SAR1BQ9Y6B6 198 aa17.78■□□□□ 0.44
SSRP1-202ENST00000293880 E2F4Q16254 413 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 MLKLQ8NB16 471 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 TGFBRAP1Q8WUH2 860 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 MED10Q9BTT4 135 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 CAPS2Q9BXY5 557 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 TECP42680 631 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 ITKQ08881 620 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 TUBB2AQ13885 445 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 TPTE2Q6XPS3 522 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 ARHGAP24Q8N264 748 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 EDC3Q96F86 508 aaKnown RBP17.77■□□□□ 0.44
SSRP1-202ENST00000293880 TUBB2BQ9BVA1 445 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 SBNO1A3KN83 1393 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 SYNJ2BP-COX16A0A087WUM0 186 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 ARHGAP6O43182 974 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 PDE6BP35913 854 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 MRPL12P52815 198 aaKnown RBP17.77■□□□□ 0.44
SSRP1-202ENST00000293880 COX16Q9P0S2 106 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms