RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 APPP05067 770 aa11.73□□□□□ -0.53
CCDC58-201ENST00000291458 AKR1B1P15121 316 aa11.73□□□□□ -0.53
CCDC58-201ENST00000291458 TDO2P48775 406 aa11.73□□□□□ -0.53
CCDC58-201ENST00000291458 MFSD10Q14728 455 aa11.73□□□□□ -0.53
CCDC58-201ENST00000291458 USP17L2Q6R6M4 530 aa11.73□□□□□ -0.53
CCDC58-201ENST00000291458 CCDC129Q6ZRS4 1044 aa11.73□□□□□ -0.53
CCDC58-201ENST00000291458 SEC62Q99442 399 aaKnown RBP11.73□□□□□ -0.53
CCDC58-201ENST00000291458 EMILIN3Q9NT22 766 aa11.73□□□□□ -0.53
CCDC58-201ENST00000291458 SRRDQ9UH36 339 aa11.73□□□□□ -0.53
CCDC58-201ENST00000291458 SLC45A1Q9Y2W3 748 aa11.73□□□□□ -0.53
CCDC58-201ENST00000291458 GUCY1A2P33402 732 aa11.72□□□□□ -0.53
CCDC58-201ENST00000291458 GABPAQ06546 454 aa11.72□□□□□ -0.53
CCDC58-201ENST00000291458 HDAC1Q13547 482 aaPredicted RBP11.72□□□□□ -0.53
CCDC58-201ENST00000291458 SH3D19Q5HYK7 790 aa11.72□□□□□ -0.53
CCDC58-201ENST00000291458 GCC1Q96CN9 775 aa11.72□□□□□ -0.53
CCDC58-201ENST00000291458 P2RX7Q99572 595 aaKnown RBP11.72□□□□□ -0.53
CCDC58-201ENST00000291458 EPB41L4AQ9HCS5 686 aaPredicted RBP11.72□□□□□ -0.53
CCDC58-201ENST00000291458 ATP8A2Q9NTI2 1148 aa11.72□□□□□ -0.53
CCDC58-201ENST00000291458 MYH4Q9Y623 1939 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 C19orf81C9J6K1 198 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 SNPHO15079 494 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 IGHDP01880 384 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 ELNP15502 786 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 VCAM1P19320 739 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 HOXD10P28358 340 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 CDK8P49336 464 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 HERVK_113P62684 666 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 ICA1Q05084 483 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 MTFR1Q15390 333 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 FAM110CQ1W6H9 321 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 C12orf60Q5U649 245 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 WDR78Q5VTH9 848 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 CTR9Q6PD62 1173 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 ARMC5Q96C12 935 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 DDX27Q96GQ7 796 aaKnown RBP11.71□□□□□ -0.53
CCDC58-201ENST00000291458 ZNF333Q96JL9 665 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 STRBPQ96SI9 672 aaKnown RBP11.71□□□□□ -0.53
CCDC58-201ENST00000291458 RWDD1Q9H446 243 aaPredicted RBP11.71□□□□□ -0.53
CCDC58-201ENST00000291458 CWC22Q9HCG8 908 aaKnown RBP11.71□□□□□ -0.53
CCDC58-201ENST00000291458 GINM1Q9NU53 330 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 ARPP21Q9UBL0 812 aaPredicted RBP11.71□□□□□ -0.53
CCDC58-201ENST00000291458 SWAP70Q9UH65 585 aa11.71□□□□□ -0.53
CCDC58-201ENST00000291458 KIAA0100Q14667 2235 aaKnown RBP11.71□□□□□ -0.54
CCDC58-201ENST00000291458 PLXNB2O15031 1838 aa11.7□□□□□ -0.54
CCDC58-201ENST00000291458 SALL3Q9BXA9 1300 aa11.7□□□□□ -0.54
CCDC58-201ENST00000291458 GSG1L2A8MUP6 293 aa11.7□□□□□ -0.54
CCDC58-201ENST00000291458 TRIM6-TRIM34B2RNG4 842 aa11.7□□□□□ -0.54
CCDC58-201ENST00000291458 PRDM1O75626 825 aa11.7□□□□□ -0.54
CCDC58-201ENST00000291458 ZFYP08048 801 aaPredicted RBP11.7□□□□□ -0.54
CCDC58-201ENST00000291458 EN2P19622 333 aaPredicted RBP11.7□□□□□ -0.54
CCDC58-201ENST00000291458 GRK4P32298 578 aa11.7□□□□□ -0.54
CCDC58-201ENST00000291458 GCLCP48506 637 aaPredicted RBP11.7□□□□□ -0.54
CCDC58-201ENST00000291458 FLT3LGP49771 235 aa11.7□□□□□ -0.54
CCDC58-201ENST00000291458 PDE1AP54750 535 aa11.7□□□□□ -0.54
CCDC58-201ENST00000291458 DSG2Q14126 1118 aa11.7□□□□□ -0.54
CCDC58-201ENST00000291458 NBPF11Q86T75 865 aa11.7□□□□□ -0.54
CCDC58-201ENST00000291458 SPICE1Q8N0Z3 855 aa11.7□□□□□ -0.54
CCDC58-201ENST00000291458 COA7Q96BR5 231 aa11.7□□□□□ -0.54
CCDC58-201ENST00000291458 TANGO6Q9C0B7 1094 aa11.7□□□□□ -0.54
CCDC58-201ENST00000291458 RPAP3Q9H6T3 665 aaPredicted RBP11.7□□□□□ -0.54
CCDC58-201ENST00000291458 TXNRD2Q9NNW7 524 aa11.7□□□□□ -0.54
CCDC58-201ENST00000291458 GREB1LQ9C091 1923 aaPredicted RBP11.69□□□□□ -0.54
CCDC58-201ENST00000291458 A0A1W2PRG0 241 aa11.69□□□□□ -0.54
CCDC58-201ENST00000291458 GNRH1P01148 92 aa11.69□□□□□ -0.54
CCDC58-201ENST00000291458 RGS19P49795 217 aa11.69□□□□□ -0.54
CCDC58-201ENST00000291458 USP14P54578 494 aa11.69□□□□□ -0.54
CCDC58-201ENST00000291458 LRRFIP1Q32MZ4 808 aaKnown RBP11.69□□□□□ -0.54
CCDC58-201ENST00000291458 PPP1R15BQ5SWA1 713 aa11.69□□□□□ -0.54
CCDC58-201ENST00000291458 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
CCDC58-201ENST00000291458 C16orf86Q6ZW13 317 aa11.69□□□□□ -0.54
CCDC58-201ENST00000291458 CCAR1Q8IX12 1150 aaKnown RBP11.69□□□□□ -0.54
CCDC58-201ENST00000291458 RILPL2Q969X0 211 aa11.69□□□□□ -0.54
CCDC58-201ENST00000291458 KIAA1683Q9H0B3 1180 aa11.69□□□□□ -0.54
CCDC58-201ENST00000291458 ARHGEF10LQ9HCE6 1279 aa11.69□□□□□ -0.54
CCDC58-201ENST00000291458 WDR70Q9NW82 654 aa11.69□□□□□ -0.54
CCDC58-201ENST00000291458 COL11A1P12107 1806 aaPredicted RBP11.69□□□□□ -0.54
CCDC58-201ENST00000291458 PARP14Q460N5 1801 aa11.69□□□□□ -0.54
CCDC58-201ENST00000291458 USP17L15C9J2P7 530 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 USP17L13C9JLJ4 530 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 USP17L11C9JVI0 530 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 USP17L18D6R9N7 530 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 USP17L22D6RA61 530 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 USP17L17D6RBQ6 530 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 USP17L19D6RCP7 530 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 USP17L20D6RJB6 530 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 ADCY3O60266 1144 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 PRMT2P55345 433 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 USP17L24Q0WX57 530 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 KIAA1755Q5JYT7 1200 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 ZMYM1Q5SVZ6 1142 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 PLPP6Q8IY26 295 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 CHMP4CQ96CF2 233 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 NAPBQ9H115 298 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 ISY1Q9ULR0 285 aaKnown RBP11.68□□□□□ -0.54
CCDC58-201ENST00000291458 A0A0G2JMZ2 1700 aa11.68□□□□□ -0.54
CCDC58-201ENST00000291458 A0A0D9SFI3 127 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 INHAP05111 366 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 CCL5P13501 91 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 GNAT2P19087 354 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 CYP2B6P20813 491 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms