RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 CYFIP2Q96F07 1278 aa11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 ANKRD27Q96NW4 1050 aa11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 BOLA2Q9H3K6 86 aa11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 PHAXQ9H814 394 aaKnown RBP11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 NCOA5Q9HCD5 579 aaKnown RBP11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 EPN1Q9Y6I3 576 aaPredicted RBP11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 NDUFA10O95299 355 aa11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 NR1D1P20393 614 aa11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 HDLBPQ00341 1268 aaKnown RBP11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 G3BP1Q13283 466 aaKnown RBP eCLIP11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 SPECC1Q5M775 1068 aa11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 SLC9C2Q5TAH2 1124 aa11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 CAPRIN2Q6IMN6 1127 aaKnown RBP11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 SPAG5Q96R06 1193 aa11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 LRRC2Q9BYS8 371 aa11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 OSBPL7Q9BZF2 842 aa11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 SLC39A2Q9NP94 309 aa11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 C15orf41Q9Y2V0 281 aa11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 REXO2Q9Y3B8 237 aaKnown RBP11.02□□□□□ -0.65
HMBOX1-201ENST00000287701 PARP4Q9UKK3 1724 aaKnown RBP11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 MYH8P13535 1937 aa11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 WASLO00401 505 aaPredicted RBP11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 GSTA1P08263 222 aa11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 SCTRP47872 440 aa11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 TAF7Q15545 349 aaPredicted RBP11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 TRIM58Q8NG06 486 aa11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 PURBQ96QR8 312 aaKnown RBP11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 HELLSQ9NRZ9 838 aa11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 LIMA1Q9UHB6 759 aaKnown RBP11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 PALLDQ8WX93 1383 aa11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 IGSF1Q8N6C5 1336 aa11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 WDR19Q8NEZ3 1342 aa11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 A2ML1A8K2U0 1454 aa11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 H7C1W4 665 aa11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 FOXO3O43524 673 aa11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 GSPT2Q8IYD1 628 aaKnown RBP11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 ZNF579Q8NAF0 562 aaKnown RBP11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 SCLT1Q96NL6 688 aa11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 ZIM3Q96PE6 472 aa11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 RABEP2Q9H5N1 569 aa11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 HAUS2Q9NVX0 235 aa11.01□□□□□ -0.65
HMBOX1-201ENST00000287701 DNM1LO00429 736 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 PAEPP09466 180 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 MARCKSP29966 332 aaPredicted RBP11□□□□□ -0.65
HMBOX1-201ENST00000287701 KRT83P78385 493 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 TTC39AQ5SRH9 613 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 TSEN2Q8NCE0 465 aaKnown RBP11□□□□□ -0.65
HMBOX1-201ENST00000287701 RRP36Q96EU6 259 aaKnown RBP11□□□□□ -0.65
HMBOX1-201ENST00000287701 NOD2Q9HC29 1040 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 SENP2Q9HC62 589 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 MYO5AQ9Y4I1 1855 aaKnown RBP11□□□□□ -0.65
HMBOX1-201ENST00000287701 MST1RQ04912 1400 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 GNAT3A8MTJ3 354 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 E7EWF7 191 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 SH2B2O14492 632 aaPredicted RBP11□□□□□ -0.65
HMBOX1-201ENST00000287701 COQ9O75208 318 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 ECM2O94769 699 aaPredicted RBP11□□□□□ -0.65
HMBOX1-201ENST00000287701 RTN3O95197 1032 aaPredicted RBP11□□□□□ -0.65
HMBOX1-201ENST00000287701 ELF3P78545 371 aaPredicted RBP11□□□□□ -0.65
HMBOX1-201ENST00000287701 CUL4BQ13620 913 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 KCNB1Q14721 858 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 PARD3BQ8TEW8 1205 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 ATP6V1G3Q96LB4 118 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 GDAP1L1Q96MZ0 367 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 ITGB3BPQ13352 177 aaPredicted RBP11□□□□□ -0.65
HMBOX1-201ENST00000287701 PDIA5Q14554 519 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 CCDC38Q502W7 563 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 KRI1Q8N9T8 703 aaKnown RBP11□□□□□ -0.65
HMBOX1-201ENST00000287701 ZFAND2BQ8WV99 257 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11□□□□□ -0.651e-6■■■■■ 52.8
HMBOX1-201ENST00000287701 CNKSR1Q969H4 720 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 HDAC6Q9UBN7 1215 aa11□□□□□ -0.65
HMBOX1-201ENST00000287701 TOPAZ1Q8N9V7 1692 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 GMNCA6NCL1 334 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 KRT86O43790 486 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 ALADP13716 330 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 SPAG1Q07617 926 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 E2F5Q15329 346 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 CCDC170Q8IYT3 715 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 CAGE1Q8TC20 777 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 SLF1Q9BQI6 1058 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 CCDC8Q9H0W5 538 aaPredicted RBP10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 TLR7Q9NYK1 1049 aaKnown RBP10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 STIM2Q9P246 746 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 GUCA1BQ9UMX6 200 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 SYNRGQ9UMZ2 1314 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 A6NHS1 94 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 PDE2AO00408 941 aaPredicted RBP10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 ABLIM1O14639 778 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 ZMYND10O75800 440 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 AP1G2O75843 785 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 LUC7L3O95232 432 aaKnown RBP10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 GUCY1A3Q02108 690 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 KIAA0753Q2KHM9 967 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 TRMT44Q8IYL2 757 aaKnown RBP10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 KLHL23Q8NBE8 558 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 SPDYE1Q8NFV5 336 aaPredicted RBP10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 NSMCE1Q8WV22 266 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 CPLX3Q8WVH0 158 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 PA2G4Q9UQ80 394 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms