RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 ESR2Q92731 530 aa20.55■□□□□ 0.88
ATG3-201ENST00000283290 NUP88Q99567 741 aaPredicted RBP20.55■□□□□ 0.88
ATG3-201ENST00000283290 USP26Q9BXU7 913 aa20.55■□□□□ 0.88
ATG3-201ENST00000283290 ZFYVE28Q9HCC9 887 aa20.55■□□□□ 0.88
ATG3-201ENST00000283290 AGTPBP1Q9UPW5 1226 aa20.55■□□□□ 0.88
ATG3-201ENST00000283290 PEX10O60683 326 aa20.54■□□□□ 0.88
ATG3-201ENST00000283290 CPA1P15085 419 aa20.54■□□□□ 0.88
ATG3-201ENST00000283290 SAMD1Q6SPF0 538 aaPredicted RBP20.54■□□□□ 0.88
ATG3-201ENST00000283290 TCEANC2Q96MN5 208 aa20.54■□□□□ 0.88
ATG3-201ENST00000283290 KIAA1683Q9H0B3 1180 aa20.54■□□□□ 0.88
ATG3-201ENST00000283290 GPHNQ9NQX3 736 aaPredicted RBP20.54■□□□□ 0.88
ATG3-201ENST00000283290 TMOD4Q9NZQ9 345 aa20.54■□□□□ 0.88
ATG3-201ENST00000283290 TMX2Q9Y320 296 aa20.54■□□□□ 0.88
ATG3-201ENST00000283290 C19orf81C9J6K1 198 aa20.53■□□□□ 0.88
ATG3-201ENST00000283290 ANTXR2P58335 489 aa20.53■□□□□ 0.88
ATG3-201ENST00000283290 USP17L2Q6R6M4 530 aa20.53■□□□□ 0.88
ATG3-201ENST00000283290 LRRC2Q9BYS8 371 aa20.53■□□□□ 0.88
ATG3-201ENST00000283290 KRT23Q9C075 422 aa20.53■□□□□ 0.88
ATG3-201ENST00000283290 SENP2Q9HC62 589 aa20.53■□□□□ 0.88
ATG3-201ENST00000283290 ZSWIM8A7E2V4 1837 aa20.52■□□□□ 0.88
ATG3-201ENST00000283290 PARP14Q460N5 1801 aa20.52■□□□□ 0.88
ATG3-201ENST00000283290 TTLL1O95922 423 aa20.52■□□□□ 0.88
ATG3-201ENST00000283290 VCAM1P19320 739 aa20.52■□□□□ 0.88
ATG3-201ENST00000283290 HSPA4P34932 840 aa20.52■□□□□ 0.88
ATG3-201ENST00000283290 RCSD1Q6JBY9 416 aa20.52■□□□□ 0.88
ATG3-201ENST00000283290 RALYLQ86SE5 291 aaKnown RBP20.52■□□□□ 0.88
ATG3-201ENST00000283290 NCOA7Q8NI08 942 aa20.52■□□□□ 0.88
ATG3-201ENST00000283290 CNNM2Q9H8M5 875 aa20.52■□□□□ 0.88
ATG3-201ENST00000283290 NYAP2Q9P242 653 aa20.52■□□□□ 0.88
ATG3-201ENST00000283290 SNX14Q9Y5W7 946 aa20.52■□□□□ 0.88
ATG3-201ENST00000283290 TLR2O60603 784 aa20.51■□□□□ 0.87
ATG3-201ENST00000283290 PCP11498 1178 aaKnown RBP20.51■□□□□ 0.87
ATG3-201ENST00000283290 TRDNQ13061 729 aa20.51■□□□□ 0.87
ATG3-201ENST00000283290 NOM1Q5C9Z4 860 aaKnown RBP20.51■□□□□ 0.87
ATG3-201ENST00000283290 MB21D2Q8IYB1 491 aaPredicted RBP20.51■□□□□ 0.87
ATG3-201ENST00000283290 SLC45A1Q9Y2W3 748 aa20.51■□□□□ 0.87
ATG3-201ENST00000283290 TNKSO95271 1327 aa20.51■□□□□ 0.87
ATG3-201ENST00000283290 ADGRA2Q96PE1 1338 aa20.51■□□□□ 0.87
ATG3-201ENST00000283290 FKTNO75072 461 aa20.51■□□□□ 0.87
ATG3-201ENST00000283290 ZSCAN10Q96SZ4 725 aaPredicted RBP20.51■□□□□ 0.87
ATG3-201ENST00000283290 PARK7Q99497 189 aaKnown RBP20.51■□□□□ 0.87
ATG3-201ENST00000283290 TMEM47Q9BQJ4 181 aa20.51■□□□□ 0.87
ATG3-201ENST00000283290 RPAP3Q9H6T3 665 aaPredicted RBP20.51■□□□□ 0.87
ATG3-201ENST00000283290 VCPKMTQ9H867 229 aa20.51■□□□□ 0.87
ATG3-201ENST00000283290 RLFQ13129 1914 aa20.5■□□□□ 0.87
ATG3-201ENST00000283290 F5H6K3 240 aa20.5■□□□□ 0.87
ATG3-201ENST00000283290 NDUFB10O96000 172 aa20.5■□□□□ 0.87
ATG3-201ENST00000283290 KLRC3Q07444 240 aa20.5■□□□□ 0.87
ATG3-201ENST00000283290 FAM83BQ5T0W9 1011 aa20.5■□□□□ 0.87
ATG3-201ENST00000283290 RNF20Q5VTR2 975 aa20.5■□□□□ 0.87
ATG3-201ENST00000283290 ENAHQ8N8S7 591 aaPredicted RBP20.5■□□□□ 0.87
ATG3-201ENST00000283290 CPA4Q9UI42 421 aa20.5■□□□□ 0.87
ATG3-201ENST00000283290 ISY1Q9ULR0 285 aaKnown RBP20.5■□□□□ 0.87
ATG3-201ENST00000283290 COL11A1P12107 1806 aaPredicted RBP20.49■□□□□ 0.87
ATG3-201ENST00000283290 USP14P54578 494 aa20.49■□□□□ 0.87
ATG3-201ENST00000283290 C12orf42Q96LP6 360 aa20.49■□□□□ 0.87
ATG3-201ENST00000283290 TANGO6Q9C0B7 1094 aa20.49■□□□□ 0.87
ATG3-201ENST00000283290 ASCC2Q9H1I8 757 aaPredicted RBP20.49■□□□□ 0.87
ATG3-201ENST00000283290 IQCA1Q86XH1 822 aa20.48■□□□□ 0.87
ATG3-201ENST00000283290 JAKMIP1Q96N16 626 aaKnown RBP20.48■□□□□ 0.87
ATG3-201ENST00000283290 UBAC1Q9BSL1 405 aa20.48■□□□□ 0.87
ATG3-201ENST00000283290 GOPCQ9HD26 462 aa20.48■□□□□ 0.87
ATG3-201ENST00000283290 TCP11L1Q9NUJ3 509 aa20.48■□□□□ 0.87
ATG3-201ENST00000283290 FBXO28Q9NVF7 368 aa20.48■□□□□ 0.87
ATG3-201ENST00000283290 IFIT3O14879 490 aaKnown RBP20.47■□□□□ 0.87
ATG3-201ENST00000283290 PRC1O43663 620 aa20.47■□□□□ 0.87
ATG3-201ENST00000283290 ZKSCAN1P17029 563 aaPredicted RBP20.47■□□□□ 0.87
ATG3-201ENST00000283290 MCCP23508 829 aa20.47■□□□□ 0.87
ATG3-201ENST00000283290 CAP1Q01518 475 aa20.47■□□□□ 0.87
ATG3-201ENST00000283290 SP3Q02447 781 aa20.47■□□□□ 0.87
ATG3-201ENST00000283290 PABPC4Q13310 644 aaKnown RBP eCLIP20.47■□□□□ 0.876e-7■■■□□ 15.9
ATG3-201ENST00000283290 SLFN13Q68D06 897 aa20.47■□□□□ 0.87
ATG3-201ENST00000283290 C17orf99Q6UX52 265 aa20.47■□□□□ 0.87
ATG3-201ENST00000283290 CD99L2Q8TCZ2 262 aa20.47■□□□□ 0.87
ATG3-201ENST00000283290 MKL1Q969V6 931 aa20.47■□□□□ 0.87
ATG3-201ENST00000283290 NEK1Q96PY6 1258 aa20.47■□□□□ 0.87
ATG3-201ENST00000283290 P2RX7Q99572 595 aaKnown RBP20.47■□□□□ 0.87
ATG3-201ENST00000283290 SH2D4AQ9H788 454 aa20.47■□□□□ 0.87
ATG3-201ENST00000283290 PNMA3Q9UL41 463 aa20.47■□□□□ 0.87
ATG3-201ENST00000283290 OSBPP22059 807 aa20.46■□□□□ 0.87
ATG3-201ENST00000283290 NOVP48745 357 aa20.46■□□□□ 0.87
ATG3-201ENST00000283290 SEC23AQ15436 765 aa20.46■□□□□ 0.87
ATG3-201ENST00000283290 POTEEQ6S8J3 1075 aa20.46■□□□□ 0.87
ATG3-201ENST00000283290 SMCR8Q8TEV9 937 aaPredicted RBP20.46■□□□□ 0.87
ATG3-201ENST00000283290 KCNB2Q92953 911 aa20.46■□□□□ 0.87
ATG3-201ENST00000283290 FRMPD2Q68DX3 1309 aaPredicted RBP20.46■□□□□ 0.87
ATG3-201ENST00000283290 MGAMO43451 1857 aa20.46■□□□□ 0.87
ATG3-201ENST00000283290 HOXA7P31268 230 aaPredicted RBP20.46■□□□□ 0.87
ATG3-201ENST00000283290 IRX3P78415 501 aaPredicted RBP20.46■□□□□ 0.87
ATG3-201ENST00000283290 KCTD1Q719H9 257 aa20.46■□□□□ 0.87
ATG3-201ENST00000283290 RAB11FIP4Q86YS3 637 aa20.46■□□□□ 0.87
ATG3-201ENST00000283290 BCRP11274 1271 aa20.45■□□□□ 0.86
ATG3-201ENST00000283290 TOP1P11387 765 aaKnown RBP20.45■□□□□ 0.86
ATG3-201ENST00000283290 TMEM67Q5HYA8 995 aa20.45■□□□□ 0.86
ATG3-201ENST00000283290 IFIT1BQ5T764 474 aaKnown RBP20.45■□□□□ 0.86
ATG3-201ENST00000283290 CATSPERGQ6ZRH7 1159 aa20.45■□□□□ 0.86
ATG3-201ENST00000283290 USP17L15C9J2P7 530 aa20.44■□□□□ 0.86
ATG3-201ENST00000283290 USP17L13C9JLJ4 530 aa20.44■□□□□ 0.86
ATG3-201ENST00000283290 USP17L11C9JVI0 530 aa20.44■□□□□ 0.86
ATG3-201ENST00000283290 USP17L18D6R9N7 530 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms