RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 KRT9P35527 623 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 TAF11Q15544 211 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 CFAP221Q4G0U5 840 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 CCDC38Q502W7 563 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 EAPPQ56P03 285 aaPredicted RBP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 UBLCP1Q8WVY7 318 aaPredicted RBP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 SLC7A3Q8WY07 619 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 RPS6KC1Q96S38 1066 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 MLXIPQ9HAP2 919 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 METTL14Q9HCE5 456 aaKnown RBP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 ANKFY1Q9P2R3 1169 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 EDC4Q6P2E9 1401 aaKnown RBP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 CCNT1O60563 726 aaKnown RBP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 SETSIPP0DME0 302 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 PPARGP37231 505 aaPredicted RBP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 PDE4DQ08499 809 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 SFMBT2Q5VUG0 894 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 CCDC105Q8IYK2 499 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 CNPY4Q8N129 248 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 CDKL2Q92772 493 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 GTF3C6Q969F1 213 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 BAG1Q99933 345 aaPredicted RBP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 MRPL44Q9H9J2 332 aaKnown RBP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 GPCPD1Q9NPB8 672 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 NRBP2Q9NSY0 501 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 LMCD1Q9NZU5 365 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 ZNF215Q9UL58 517 aaPredicted RBP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 SEMA3EO15041 775 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 NSFP46459 744 aaKnown RBP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 EIF4A2Q14240 407 aaKnown RBP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 HADHQ16836 314 aaKnown RBP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 CREB3L3Q68CJ9 461 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 RUNDC3BQ96NL0 473 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 MEIS3Q99687 375 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 Q9H521 79 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 HOMER3Q9NSC5 361 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 XRCC6P12956 609 aaKnown RBP eCLIP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 LMNB2Q03252 620 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 TFCP2Q12800 502 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 SLC39A6Q13433 755 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 ZSCAN23Q3MJ62 389 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 CEP85LQ5SZL2 805 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 ANO1Q5XXA6 986 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 ZNF772Q68DY9 489 aaPredicted RBP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 PEX26Q7Z412 305 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 CPXCR1Q8N123 301 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 MYCT1Q8N699 235 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 CEP120Q8N960 986 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 RETREG2Q8NC44 543 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 CAPZA3Q96KX2 299 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 PARD3Q8TEW0 1356 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 THAP12O43422 761 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 DNAJC8O75937 253 aaPredicted RBP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 KCNA6P17658 529 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 ICA1Q05084 483 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 DBN1Q16643 649 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 RUFY3Q7L099 469 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 CEP57Q86XR8 500 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 ANKRD35Q8N283 1001 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 DCTPP1Q9H773 170 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 RAB20Q9NX57 234 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 PNMA3Q9UL41 463 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 FAM83GA6ND36 823 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 ERVV-2B6SEH9 535 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 CFBP00751 764 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 KRT15P19012 456 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 KRT81Q14533 505 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 IFIH1Q9BYX4 1025 aaKnown RBP4.48□□□□□ -1.69
SCN3A-201ENST00000283254 TTLL3Q9Y4R7 772 aa4.48□□□□□ -1.69
SCN3A-201ENST00000283254 RNMTO43148 476 aaKnown RBP4.47□□□□□ -1.69
SCN3A-201ENST00000283254 EVI5O60447 810 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 RNF40O75150 1001 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 HEXIM1O94992 359 aaKnown RBP4.47□□□□□ -1.69
SCN3A-201ENST00000283254 KLHL30Q0D2K2 578 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 NCAPH2Q6IBW4 605 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 JADE1Q6IE81 842 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 ZNF790Q6PG37 636 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 KIF2CQ99661 725 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 LRRC2Q9BYS8 371 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 DNAJC25Q9H1X3 360 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 ST7Q9NRC1 585 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 SLC12A6Q9UHW9 1150 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 COL4A3BPQ9Y5P4 624 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 SPDYE16A6NNV3 312 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-201ENST00000283254 ANXA1P04083 346 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 POLR2MP0CAP2 368 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 TROVE2P10155 538 aaKnown RBP eCLIP4.47□□□□□ -1.69
SCN3A-201ENST00000283254 RFC1P35251 1148 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-201ENST00000283254 RPS8P62241 208 aaKnown RBP4.47□□□□□ -1.69
SCN3A-201ENST00000283254 RPS6KA1Q15418 735 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 SUPT20HL1Q3ZLR7 823 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 SPDYE2Q495Y8 402 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 KIAA1841Q6NSI8 718 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 CCDC186Q7Z3E2 898 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 SPATA5Q8NB90 893 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 GCNAQ96QF7 691 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 LRFN2Q9ULH4 789 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 GSTA1P08263 222 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 GSTA2P09210 222 aa4.47□□□□□ -1.69
SCN3A-201ENST00000283254 POSTNQ15063 836 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms