RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 MLKLQ8NB16 471 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 LLPHQ9BRT6 129 aaKnown RBP9.58□□□□□ -0.88
NIPBL-201ENST00000282516 PHF8Q9UPP1 1060 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 CALCRLQ16602 461 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 TMTC3Q6ZXV5 915 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 MYRIPQ8NFW9 859 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.58□□□□□ -0.882e-6■■■■■ 54.9
NIPBL-201ENST00000282516 KRIT1O00522 736 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 GNGT2O14610 69 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 ATF2P15336 505 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 ADCY7P51828 1080 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 TTC6Q86TZ1 520 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 NELFBQ8WX92 580 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 CAPS2Q9BXY5 557 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 SAR1BQ9Y6B6 198 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 NR1I2O75469 434 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 GCNT3O95395 438 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 KRT10P13645 584 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 KPNA2P52292 529 aaKnown RBP9.58□□□□□ -0.88
NIPBL-201ENST00000282516 PDXDC1Q6P996 788 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 ZNF449Q6P9G9 518 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 NVLO15381 856 aaKnown RBP9.58□□□□□ -0.88
NIPBL-201ENST00000282516 CLTAP09496 248 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 KRT25Q7Z3Z0 450 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 TEX12Q9BXU0 123 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 IQSEC3Q9UPP2 1182 aaPredicted RBP9.58□□□□□ -0.88
NIPBL-201ENST00000282516 PEX19P40855 299 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 PRPSAP1Q14558 356 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 LRRC8CQ8TDW0 803 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 DNM3Q9UQ16 869 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 KCNA4P22459 653 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 GNGT1P63211 74 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 LRRC23Q53EV4 343 aaPredicted RBP9.58□□□□□ -0.88
NIPBL-201ENST00000282516 PRPF38AQ8NAV1 312 aaKnown RBP9.58□□□□□ -0.88
NIPBL-201ENST00000282516 GUCY2FP51841 1108 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 YARSP54577 528 aaKnown RBP9.58□□□□□ -0.88
NIPBL-201ENST00000282516 FAM186BQ8IYM0 893 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 TSC1Q92574 1164 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 VPS16Q9H269 839 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 PACSIN2Q9UNF0 486 aaPredicted RBP9.58□□□□□ -0.88
NIPBL-201ENST00000282516 POLD1P28340 1107 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 PPP2R5AQ15172 486 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 CCDC138Q96M89 665 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 GIMAP4Q9NUV9 329 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 MAST3O60307 1309 aa9.58□□□□□ -0.88
NIPBL-201ENST00000282516 IBTKQ9P2D0 1353 aaPredicted RBP9.57□□□□□ -0.88
NIPBL-201ENST00000282516 SBNO2Q9Y2G9 1366 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 MYCT1Q8N699 235 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 MED10Q9BTT4 135 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 TRIM15Q9C019 465 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 SOS1Q07889 1333 aaPredicted RBP9.57□□□□□ -0.88
NIPBL-201ENST00000282516 IL9RQ01113 521 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 IL1RL1Q01638 556 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 ITKQ08881 620 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 ANAPC5Q9UJX4 755 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 SUFUQ9UMX1 484 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 EEF1B2P24534 225 aaKnown RBP9.57□□□□□ -0.88
NIPBL-201ENST00000282516 APBA1Q02410 837 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 NME9Q86XW9 330 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 TSTA3Q13630 321 aaPredicted RBP9.57□□□□□ -0.88
NIPBL-201ENST00000282516 IQCB1Q15051 598 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 LONRF3Q496Y0 759 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 C1orf112Q9NSG2 853 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 WWC3Q9ULE0 1092 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 SPDYE2BA6NHP3 402 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 SPDYE6P0CI01 402 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 POLR2BP30876 1174 aaKnown RBP9.57□□□□□ -0.88
NIPBL-201ENST00000282516 TMED1Q13445 227 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 KRT82Q9NSB4 513 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 MAD1L1Q9Y6D9 718 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 MYO10Q9HD67 2058 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 A0A1B0GVL5 298 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 TTC38Q5R3I4 469 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 ANGPTL2Q9UKU9 493 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 GINS2Q9Y248 185 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.57□□□□□ -0.88
NIPBL-201ENST00000282516 DAAM1Q9Y4D1 1078 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 POTEB3A0JP26 581 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 POTEBQ6S5H4 581 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 FGD4Q96M96 766 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 SCOCQ9UIL1 159 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 PNMA2Q9UL42 364 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 IQGAP2Q13576 1575 aa9.57□□□□□ -0.88
NIPBL-201ENST00000282516 SPOUT1Q5T280 376 aaKnown RBP9.56□□□□□ -0.88
NIPBL-201ENST00000282516 XAGE3Q8WTP9 111 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 POLR2DO15514 142 aaKnown RBP9.56□□□□□ -0.88
NIPBL-201ENST00000282516 IGSF3O75054 1194 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 MAGEA1P43355 309 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 AK2P54819 239 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 GDAP1L1Q96MZ0 367 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 POLR3CQ9BUI4 534 aaPredicted RBP9.56□□□□□ -0.88
NIPBL-201ENST00000282516 PARP3Q9Y6F1 533 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 XRCC5P13010 732 aaKnown RBP9.56□□□□□ -0.88
NIPBL-201ENST00000282516 TNNI1P19237 187 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 SPZ1Q9BXG8 430 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 POSTNQ15063 836 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 ABTB1Q969K4 478 aaPredicted RBP9.56□□□□□ -0.88
NIPBL-201ENST00000282516 LSM14BQ9BX40 385 aaKnown RBP9.56□□□□□ -0.88
NIPBL-201ENST00000282516 SUCLA2Q9P2R7 463 aaPredicted RBP9.56□□□□□ -0.88
NIPBL-201ENST00000282516 SERPINI2O75830 405 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms