RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 IRF6O14896 467 aa20.15■□□□□ 0.82
SKP2-201ENST00000274254 GJA5P36382 358 aa20.15■□□□□ 0.82
SKP2-201ENST00000274254 BACE1P56817 501 aa20.15■□□□□ 0.82
SKP2-201ENST00000274254 ZNF654Q8IZM8 581 aa20.15■□□□□ 0.82
SKP2-201ENST00000274254 GMCL1P1Q8NEA9 526 aa20.15■□□□□ 0.82
SKP2-201ENST00000274254 LARP6Q9BRS8 491 aaKnown RBP20.15■□□□□ 0.82
SKP2-201ENST00000274254 TPCN1Q9ULQ1 816 aa20.15■□□□□ 0.82
SKP2-201ENST00000274254 KCNH4Q9UQ05 1017 aa20.15■□□□□ 0.82
SKP2-201ENST00000274254 SLC12A7Q9Y666 1083 aa20.15■□□□□ 0.82
SKP2-201ENST00000274254 PTPRFP10586 1907 aa20.15■□□□□ 0.82
SKP2-201ENST00000274254 KLF18A0A0U1RQI7 1052 aa20.14■□□□□ 0.81
SKP2-201ENST00000274254 TRIM75PA6NK02 468 aa20.14■□□□□ 0.81
SKP2-201ENST00000274254 TROAPQ12815 778 aa20.14■□□□□ 0.81
SKP2-201ENST00000274254 MTMR2Q13614 643 aa20.14■□□□□ 0.81
SKP2-201ENST00000274254 WNK4Q96J92 1243 aa20.14■□□□□ 0.81
SKP2-201ENST00000274254 FEZ1Q99689 392 aa20.14■□□□□ 0.81
SKP2-201ENST00000274254 VCPKMTQ9H867 229 aa20.14■□□□□ 0.81
SKP2-201ENST00000274254 CREBZFQ9NS37 354 aa20.14■□□□□ 0.81
SKP2-201ENST00000274254 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.14■□□□□ 0.81
SKP2-201ENST00000274254 ABT1Q9ULW3 272 aaKnown RBP20.14■□□□□ 0.81
SKP2-201ENST00000274254 DDAH1O94760 285 aa20.13■□□□□ 0.81
SKP2-201ENST00000274254 MCM2P49736 904 aa20.13■□□□□ 0.81
SKP2-201ENST00000274254 RCAN1P53805 252 aa20.13■□□□□ 0.81
SKP2-201ENST00000274254 RGMBQ6NW40 437 aa20.13■□□□□ 0.81
SKP2-201ENST00000274254 CATIPQ7Z7H3 387 aa20.13■□□□□ 0.81
SKP2-201ENST00000274254 SNX21Q969T3 373 aa20.13■□□□□ 0.81
SKP2-201ENST00000274254 ZNF274Q96GC6 653 aaPredicted RBP20.13■□□□□ 0.81
SKP2-201ENST00000274254 LIMCH1Q9UPQ0 1083 aa20.13■□□□□ 0.81
SKP2-201ENST00000274254 C19orf81C9J6K1 198 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 F5H6K3 240 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 CXCL11O14625 94 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 SNHG28P0DPA3 235 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 ZBTB48P10074 688 aaPredicted RBP20.12■□□□□ 0.81
SKP2-201ENST00000274254 USP14P54578 494 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 KLRC3Q07444 240 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 SH3D19Q5HYK7 790 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 KIAA1755Q5JYT7 1200 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 SPRYD7Q5W111 196 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 RASAL3Q86YV0 1011 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 MYL10Q9BUA6 226 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 GOPCQ9HD26 462 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 EMILIN3Q9NT22 766 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 HPS5Q9UPZ3 1129 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 NDUFB10O96000 172 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 PDHBP11177 359 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 PDIA3P30101 505 aaKnown RBP20.12■□□□□ 0.81
SKP2-201ENST00000274254 ZNF157P51786 506 aaPredicted RBP20.12■□□□□ 0.81
SKP2-201ENST00000274254 SYNE3Q6ZMZ3 975 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 NOL8Q76FK4 1167 aaKnown RBP20.12■□□□□ 0.81
SKP2-201ENST00000274254 LPAR1Q92633 364 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 C12orf42Q96LP6 360 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 MAP3K14Q99558 947 aa20.12■□□□□ 0.81
SKP2-201ENST00000274254 NID2Q14112 1375 aa20.11■□□□□ 0.81
SKP2-201ENST00000274254 A0A0G2JLL6 359 aaPredicted RBP20.11■□□□□ 0.81
SKP2-201ENST00000274254 GOLGA8BA8MQT2 603 aa20.11■□□□□ 0.81
SKP2-201ENST00000274254 ZBTB43O43298 467 aa20.11■□□□□ 0.81
SKP2-201ENST00000274254 CALM1P0DP23 149 aa20.11■□□□□ 0.81
SKP2-201ENST00000274254 CALM2P0DP24 149 aa20.11■□□□□ 0.81
SKP2-201ENST00000274254 CALM3P0DP25 149 aa20.11■□□□□ 0.81
SKP2-201ENST00000274254 ZYXQ15942 572 aaKnown RBP20.11■□□□□ 0.81
SKP2-201ENST00000274254 SLFN13Q68D06 897 aa20.11■□□□□ 0.81
SKP2-201ENST00000274254 USP17L2Q6R6M4 530 aa20.11■□□□□ 0.81
SKP2-201ENST00000274254 RASGRP2Q7LDG7 609 aa20.11■□□□□ 0.81
SKP2-201ENST00000274254 PRRT2Q7Z6L0 340 aaPredicted RBP20.11■□□□□ 0.81
SKP2-201ENST00000274254 MICU3Q86XE3 530 aa20.11■□□□□ 0.81
SKP2-201ENST00000274254 GMCL1Q96IK5 515 aa20.11■□□□□ 0.81
SKP2-201ENST00000274254 SLC10A3P09131 477 aa20.1■□□□□ 0.81
SKP2-201ENST00000274254 HMGCS2P54868 508 aa20.1■□□□□ 0.81
SKP2-201ENST00000274254 DGKZQ13574 1117 aa20.1■□□□□ 0.81
SKP2-201ENST00000274254 ME3Q16798 604 aa20.1■□□□□ 0.81
SKP2-201ENST00000274254 DCAF4Q8WV16 495 aa20.1■□□□□ 0.81
SKP2-201ENST00000274254 RASSF10A6NK89 507 aa20.09■□□□□ 0.81
SKP2-201ENST00000274254 FAM155AB1AL88 458 aaPredicted RBP20.09■□□□□ 0.81
SKP2-201ENST00000274254 LARGE1O95461 756 aa20.09■□□□□ 0.81
SKP2-201ENST00000274254 RXRAP19793 462 aa20.09■□□□□ 0.81
SKP2-201ENST00000274254 SNAPC2Q13487 334 aa20.09■□□□□ 0.81
SKP2-201ENST00000274254 GRM4Q14833 912 aa20.09■□□□□ 0.81
SKP2-201ENST00000274254 RAB11FIP4Q86YS3 637 aa20.09■□□□□ 0.81
SKP2-201ENST00000274254 SPICE1Q8N0Z3 855 aa20.09■□□□□ 0.81
SKP2-201ENST00000274254 FANCBQ8NB91 859 aa20.09■□□□□ 0.81
SKP2-201ENST00000274254 NUP133Q8WUM0 1156 aa20.09■□□□□ 0.81
SKP2-201ENST00000274254 MS4A4AQ96JQ5 239 aa20.09■□□□□ 0.81
SKP2-201ENST00000274254 ZSCAN31Q96LW9 406 aaPredicted RBP20.09■□□□□ 0.81
SKP2-201ENST00000274254 NAP1L2Q9ULW6 460 aaPredicted RBP20.09■□□□□ 0.81
SKP2-201ENST00000274254 MTMR7Q9Y216 660 aa20.09■□□□□ 0.81
SKP2-201ENST00000274254 LOC285556D6RIA3 1793 aa20.08■□□□□ 0.81
SKP2-201ENST00000274254 PFKFB2O60825 505 aa20.08■□□□□ 0.81
SKP2-201ENST00000274254 SLC1A4P43007 532 aa20.08■□□□□ 0.81
SKP2-201ENST00000274254 MOGSQ13724 837 aa20.08■□□□□ 0.81
SKP2-201ENST00000274254 CCDC102AQ96A19 550 aa20.08■□□□□ 0.81
SKP2-201ENST00000274254 SH2B1Q9NRF2 756 aaPredicted RBP20.08■□□□□ 0.81
SKP2-201ENST00000274254 FAM217BQ9NTX9 383 aaPredicted RBP20.08■□□□□ 0.81
SKP2-201ENST00000274254 TMOD4Q9NZQ9 345 aa20.08■□□□□ 0.81
SKP2-201ENST00000274254 PALM3A6NDB9 673 aaPredicted RBP20.07■□□□□ 0.8
SKP2-201ENST00000274254 WDR46O15213 610 aaKnown RBP20.07■□□□□ 0.8
SKP2-201ENST00000274254 RAD21O60216 631 aa20.07■□□□□ 0.8
SKP2-201ENST00000274254 VCAM1P19320 739 aa20.07■□□□□ 0.8
SKP2-201ENST00000274254 METAP2P50579 478 aaKnown RBP eCLIP20.07■□□□□ 0.8
SKP2-201ENST00000274254 GTF2A2P52657 109 aa20.07■□□□□ 0.8
SKP2-201ENST00000274254 ZNF543Q08ER8 600 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms