RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 LINC00116Q8NCU8 138 aa27.37■■□□□ 1.97
SH3GL1-201ENST00000269886 CCDC34Q96HJ3 373 aa27.37■■□□□ 1.97
SH3GL1-201ENST00000269886 SYNRGQ9UMZ2 1314 aa27.37■■□□□ 1.97
SH3GL1-201ENST00000269886 ADAMTS3O15072 1205 aa27.37■■□□□ 1.97
SH3GL1-201ENST00000269886 SPATA1Q5VX52 437 aa27.37■■□□□ 1.97
SH3GL1-201ENST00000269886 FBXO33Q7Z6M2 555 aa27.37■■□□□ 1.97
SH3GL1-201ENST00000269886 CARD6Q9BX69 1037 aa27.37■■□□□ 1.97
SH3GL1-201ENST00000269886 DCP1AQ9NPI6 582 aaPredicted RBP27.37■■□□□ 1.97
SH3GL1-201ENST00000269886 GNG11P61952 73 aa27.36■■□□□ 1.97
SH3GL1-201ENST00000269886 MTF1Q14872 753 aa27.36■■□□□ 1.97
SH3GL1-201ENST00000269886 KRT222Q8N1A0 295 aa27.36■■□□□ 1.97
SH3GL1-201ENST00000269886 CTCFLQ8NI51 663 aaPredicted RBP27.36■■□□□ 1.97
SH3GL1-201ENST00000269886 PCP11498 1178 aaKnown RBP27.36■■□□□ 1.97
SH3GL1-201ENST00000269886 SLC4A8Q2Y0W8 1093 aa27.36■■□□□ 1.97
SH3GL1-201ENST00000269886 MNS1Q8NEH6 495 aa27.36■■□□□ 1.97
SH3GL1-201ENST00000269886 COBLO75128 1261 aa27.35■■□□□ 1.97
SH3GL1-201ENST00000269886 PRDX5P30044 214 aa27.35■■□□□ 1.97
SH3GL1-201ENST00000269886 PIK3AP1Q6ZUJ8 805 aa27.35■■□□□ 1.97
SH3GL1-201ENST00000269886 UBXN4Q92575 508 aa27.35■■□□□ 1.97
SH3GL1-201ENST00000269886 FAM53CQ9NYF3 392 aa27.35■■□□□ 1.97
SH3GL1-201ENST00000269886 JAG2Q9Y219 1238 aa27.35■■□□□ 1.97
SH3GL1-201ENST00000269886 BMP15O95972 392 aa27.35■■□□□ 1.97
SH3GL1-201ENST00000269886 CLCN6P51797 869 aa27.35■■□□□ 1.97
SH3GL1-201ENST00000269886 ATP2C1P98194 919 aaPredicted RBP27.35■■□□□ 1.97
SH3GL1-201ENST00000269886 TBC1D9BQ66K14 1250 aa27.35■■□□□ 1.97
SH3GL1-201ENST00000269886 SCN7AQ01118 1682 aa27.35■■□□□ 1.97
SH3GL1-201ENST00000269886 PPP1R3GB7ZBB8 358 aa27.34■■□□□ 1.97
SH3GL1-201ENST00000269886 GSDMAQ96QA5 445 aa27.34■■□□□ 1.97
SH3GL1-201ENST00000269886 CPLX3Q8WVH0 158 aa27.34■■□□□ 1.97
SH3GL1-201ENST00000269886 BLZF1Q9H2G9 400 aa27.34■■□□□ 1.97
SH3GL1-201ENST00000269886 MYH13Q9UKX3 1938 aa27.34■■□□□ 1.97
SH3GL1-201ENST00000269886 ORC4O43929 436 aa27.33■■□□□ 1.97
SH3GL1-201ENST00000269886 NLRP5P59047 1200 aa27.33■■□□□ 1.97
SH3GL1-201ENST00000269886 CCDC24Q8N4L8 307 aa27.33■■□□□ 1.97
SH3GL1-201ENST00000269886 SMARCC1Q92922 1105 aaPredicted RBP27.33■■□□□ 1.97
SH3GL1-201ENST00000269886 SOWAHDA6NJG2 315 aa27.33■■□□□ 1.97
SH3GL1-201ENST00000269886 AKR1B15C9JRZ8 316 aaPredicted RBP27.33■■□□□ 1.97
SH3GL1-201ENST00000269886 SCG2P13521 617 aa27.33■■□□□ 1.97
SH3GL1-201ENST00000269886 CASQ1P31415 396 aa27.33■■□□□ 1.97
SH3GL1-201ENST00000269886 CRNKL1Q9BZJ0 848 aaKnown RBP27.33■■□□□ 1.97
SH3GL1-201ENST00000269886 XDHP47989 1333 aa27.33■■□□□ 1.97
SH3GL1-201ENST00000269886 TADA3O75528 432 aa27.32■■□□□ 1.96
SH3GL1-201ENST00000269886 MCM7P33993 719 aa27.32■■□□□ 1.96
SH3GL1-201ENST00000269886 RBL2Q08999 1139 aa27.32■■□□□ 1.96
SH3GL1-201ENST00000269886 KARSQ15046 597 aaKnown RBP27.32■■□□□ 1.96
SH3GL1-201ENST00000269886 CDKAL1Q5VV42 579 aa27.32■■□□□ 1.96
SH3GL1-201ENST00000269886 IGSF22Q8N9C0 903 aa27.32■■□□□ 1.96
SH3GL1-201ENST00000269886 SRRTQ9BXP5 876 aaKnown RBP27.32■■□□□ 1.96
SH3GL1-201ENST00000269886 ADD3Q9UEY8 706 aaKnown RBP27.32■■□□□ 1.96
SH3GL1-201ENST00000269886 GOLGA6L9A6NEM1 432 aa27.32■■□□□ 1.96
SH3GL1-201ENST00000269886 RPS8P62241 208 aaKnown RBP27.32■■□□□ 1.96
SH3GL1-201ENST00000269886 IL17AQ16552 155 aa27.32■■□□□ 1.96
SH3GL1-201ENST00000269886 DLEC1Q9Y238 1755 aa27.32■■□□□ 1.96
SH3GL1-201ENST00000269886 HIBADHP31937 336 aaKnown RBP27.31■■□□□ 1.96
SH3GL1-201ENST00000269886 CT47A1Q5JQC4 288 aaPredicted RBP27.31■■□□□ 1.96
SH3GL1-201ENST00000269886 MRPL44Q9H9J2 332 aaKnown RBP27.31■■□□□ 1.96
SH3GL1-201ENST00000269886 E2F4Q16254 413 aa27.31■■□□□ 1.96
SH3GL1-201ENST00000269886 TSPY2A6NKD2 308 aa27.3■■□□□ 1.96
SH3GL1-201ENST00000269886 SEMA3EO15041 775 aa27.3■■□□□ 1.96
SH3GL1-201ENST00000269886 CTNND2Q9UQB3 1225 aa27.3■■□□□ 1.96
SH3GL1-201ENST00000269886 SPATA31A5Q5VU36 1347 aa27.3■■□□□ 1.96
SH3GL1-201ENST00000269886 SPATA31A7Q8IWB4 1347 aa27.3■■□□□ 1.96
SH3GL1-201ENST00000269886 CASZ1Q86V15 1759 aa27.3■■□□□ 1.96
SH3GL1-201ENST00000269886 MTRQ99707 1265 aa27.3■■□□□ 1.96
SH3GL1-201ENST00000269886 IRX2Q9BZI1 471 aaPredicted RBP27.3■■□□□ 1.96
SH3GL1-201ENST00000269886 EPC1Q9H2F5 836 aa27.3■■□□□ 1.96
SH3GL1-201ENST00000269886 ST7Q9NRC1 585 aa27.3■■□□□ 1.96
SH3GL1-201ENST00000269886 PBX1P40424 430 aa27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 MAP3K9P80192 1104 aa27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 GABPB1Q06547 395 aaPredicted RBP27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 PFKFB3Q16875 520 aaPredicted RBP27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 SLC10A5Q5PT55 438 aa27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 RCSD1Q6JBY9 416 aa27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 PPFIBP1Q86W92 1011 aa27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 KIFC2Q96AC6 838 aa27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 PANX2Q96RD6 677 aa27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 ATP8A2Q9NTI2 1148 aa27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 NUTM2BA6NNL0 878 aaPredicted RBP27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 EFCAB8A8MWE9 144 aa27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 NUTM2EB1AL46 878 aaPredicted RBP27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 RAD9BQ6WBX8 426 aa27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 TXNRD3Q86VQ6 643 aa27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 IQUBQ8NA54 791 aa27.29■■□□□ 1.96
SH3GL1-201ENST00000269886 FHOD1Q9Y613 1164 aa27.28■■□□□ 1.96
SH3GL1-201ENST00000269886 COL5A3P25940 1745 aaPredicted RBP27.28■■□□□ 1.96
SH3GL1-201ENST00000269886 A0A0U1RQJ8 604 aa27.28■■□□□ 1.96
SH3GL1-201ENST00000269886 USP17L8P0C7I0 530 aa27.28■■□□□ 1.96
SH3GL1-201ENST00000269886 CDC25AP30304 524 aa27.28■■□□□ 1.96
SH3GL1-201ENST00000269886 PDXDC2PQ6P474 469 aa27.28■■□□□ 1.96
SH3GL1-201ENST00000269886 ATRIPQ8WXE1 791 aa27.28■■□□□ 1.96
SH3GL1-201ENST00000269886 NRAPQ86VF7 1730 aa27.28■■□□□ 1.96
SH3GL1-201ENST00000269886 MCM9Q9NXL9 1143 aa27.27■■□□□ 1.96
SH3GL1-201ENST00000269886 ARPP21Q9UBL0 812 aaPredicted RBP27.27■■□□□ 1.96
SH3GL1-201ENST00000269886 SRP68Q9UHB9 627 aaKnown RBP27.27■■□□□ 1.96
SH3GL1-201ENST00000269886 CCT6AP40227 531 aaKnown RBP27.27■■□□□ 1.96
SH3GL1-201ENST00000269886 BMS1Q14692 1282 aaKnown RBP27.27■■□□□ 1.96
SH3GL1-201ENST00000269886 RRAGBQ5VZM2 374 aa27.27■■□□□ 1.96
SH3GL1-201ENST00000269886 NLRP3Q96P20 1036 aa27.27■■□□□ 1.96
SH3GL1-201ENST00000269886 LZTFL1Q9NQ48 299 aa27.27■■□□□ 1.96
SH3GL1-201ENST00000269886 MRFAP1Q9Y605 127 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms