RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 SH2D4AQ9H788 454 aa16.79■□□□□ 0.28
SSBP1-201ENST00000265304 ARHGEF10LQ9HCE6 1279 aa16.79■□□□□ 0.28
SSBP1-201ENST00000265304 TNKSO95271 1327 aa16.78■□□□□ 0.28
SSBP1-201ENST00000265304 SNHG28P0DPA3 235 aa16.78■□□□□ 0.28
SSBP1-201ENST00000265304 USP14P54578 494 aa16.78■□□□□ 0.28
SSBP1-201ENST00000265304 CCDC84Q86UT8 332 aaPredicted RBP16.78■□□□□ 0.28
SSBP1-201ENST00000265304 CLEC10AQ8IUN9 316 aa16.78■□□□□ 0.28
SSBP1-201ENST00000265304 DNAJC5GQ8N7S2 189 aa16.78■□□□□ 0.28
SSBP1-201ENST00000265304 LPAR1Q92633 364 aa16.78■□□□□ 0.28
SSBP1-201ENST00000265304 CAPNS2Q96L46 248 aa16.78■□□□□ 0.28
SSBP1-201ENST00000265304 MAP3K14Q99558 947 aa16.78■□□□□ 0.28
SSBP1-201ENST00000265304 TMEM47Q9BQJ4 181 aa16.78■□□□□ 0.28
SSBP1-201ENST00000265304 UBAC1Q9BSL1 405 aa16.78■□□□□ 0.28
SSBP1-201ENST00000265304 VCPKMTQ9H867 229 aa16.78■□□□□ 0.28
SSBP1-201ENST00000265304 LY9Q9HBG7 655 aa16.78■□□□□ 0.28
SSBP1-201ENST00000265304 ZCCHC17Q9NP64 241 aaKnown RBP16.78■□□□□ 0.28
SSBP1-201ENST00000265304 EMILIN3Q9NT22 766 aa16.78■□□□□ 0.28
SSBP1-201ENST00000265304 MANSC4A6NHS7 340 aaPredicted RBP16.77■□□□□ 0.28
SSBP1-201ENST00000265304 SH2B2O14492 632 aaPredicted RBP16.77■□□□□ 0.28
SSBP1-201ENST00000265304 CETPP11597 493 aa16.77■□□□□ 0.28
SSBP1-201ENST00000265304 CASTP20810 708 aaKnown RBP16.77■□□□□ 0.28
SSBP1-201ENST00000265304 HOXA7P31268 230 aaPredicted RBP16.77■□□□□ 0.28
SSBP1-201ENST00000265304 SART3Q15020 963 aaKnown RBP16.77■□□□□ 0.28
SSBP1-201ENST00000265304 USP17L2Q6R6M4 530 aa16.77■□□□□ 0.28
SSBP1-201ENST00000265304 FASTKD5Q7L8L6 764 aaKnown RBP16.77■□□□□ 0.28
SSBP1-201ENST00000265304 CLIP2Q9UDT6 1046 aa16.77■□□□□ 0.28
SSBP1-201ENST00000265304 SLC45A1Q9Y2W3 748 aa16.77■□□□□ 0.28
SSBP1-201ENST00000265304 CYP46A1Q9Y6A2 500 aa16.77■□□□□ 0.28
SSBP1-201ENST00000265304 CEP350Q5VT06 3117 aa16.76■□□□□ 0.27
SSBP1-201ENST00000265304 F5H6K3 240 aa16.76■□□□□ 0.27
SSBP1-201ENST00000265304 IFIT3O14879 490 aaKnown RBP16.76■□□□□ 0.27
SSBP1-201ENST00000265304 RCAN1P53805 252 aa16.76■□□□□ 0.27
SSBP1-201ENST00000265304 KLRC3Q07444 240 aa16.76■□□□□ 0.27
SSBP1-201ENST00000265304 CYP4F22Q6NT55 531 aa16.76■□□□□ 0.27
SSBP1-201ENST00000265304 GPAT2Q6NUI2 795 aa16.76■□□□□ 0.27
SSBP1-201ENST00000265304 GMCL1Q96IK5 515 aa16.76■□□□□ 0.27
SSBP1-201ENST00000265304 BAZ2BQ9UIF8 2168 aaKnown RBP16.75■□□□□ 0.27
SSBP1-201ENST00000265304 WDR33Q9C0J8 1336 aaKnown RBP16.75■□□□□ 0.27
SSBP1-201ENST00000265304 PLA2G6O60733 806 aa16.75■□□□□ 0.27
SSBP1-201ENST00000265304 VEGFBP49765 207 aa16.75■□□□□ 0.27
SSBP1-201ENST00000265304 TROAPQ12815 778 aa16.75■□□□□ 0.27
SSBP1-201ENST00000265304 MTMR2Q13614 643 aa16.75■□□□□ 0.27
SSBP1-201ENST00000265304 TMEM67Q5HYA8 995 aa16.75■□□□□ 0.27
SSBP1-201ENST00000265304 KIAA1755Q5JYT7 1200 aa16.75■□□□□ 0.27
SSBP1-201ENST00000265304 CHST3Q7LGC8 479 aa16.75■□□□□ 0.27
SSBP1-201ENST00000265304 BRI3BPQ8WY22 251 aa16.75■□□□□ 0.27
SSBP1-201ENST00000265304 ZKSCAN3Q9BRR0 538 aa16.75■□□□□ 0.27
SSBP1-201ENST00000265304 STX8Q9UNK0 236 aa16.75■□□□□ 0.27
SSBP1-201ENST00000265304 ERICH2A1L162 156 aa16.74■□□□□ 0.27
SSBP1-201ENST00000265304 TRIM75PA6NK02 468 aa16.74■□□□□ 0.27
SSBP1-201ENST00000265304 WTAPQ15007 396 aa16.74■□□□□ 0.27
SSBP1-201ENST00000265304 IFIT1BQ5T764 474 aaKnown RBP16.74■□□□□ 0.27
SSBP1-201ENST00000265304 ANKRD23Q86SG2 305 aa16.74■□□□□ 0.27
SSBP1-201ENST00000265304 PTPN18Q99952 460 aa16.74■□□□□ 0.27
SSBP1-201ENST00000265304 SENP2Q9HC62 589 aa16.74■□□□□ 0.27
SSBP1-201ENST00000265304 GOPCQ9HD26 462 aa16.74■□□□□ 0.27
SSBP1-201ENST00000265304 GPHNQ9NQX3 736 aaPredicted RBP16.74■□□□□ 0.27
SSBP1-201ENST00000265304 WDR46O15213 610 aaKnown RBP16.73■□□□□ 0.27
SSBP1-201ENST00000265304 NDUFB10O96000 172 aa16.73■□□□□ 0.27
SSBP1-201ENST00000265304 CPA1P15085 419 aa16.73■□□□□ 0.27
SSBP1-201ENST00000265304 HMGCS2P54868 508 aa16.73■□□□□ 0.27
SSBP1-201ENST00000265304 HTRA3P83110 453 aa16.73■□□□□ 0.27
SSBP1-201ENST00000265304 KIF23Q02241 960 aaPredicted RBP16.73■□□□□ 0.27
SSBP1-201ENST00000265304 TOB2Q14106 344 aaPredicted RBP16.73■□□□□ 0.27
SSBP1-201ENST00000265304 RABEP1Q15276 862 aa16.73■□□□□ 0.27
SSBP1-201ENST00000265304 PNMA1Q8ND90 353 aa16.73■□□□□ 0.27
SSBP1-201ENST00000265304 ZIC5Q96T25 663 aa16.73■□□□□ 0.27
SSBP1-201ENST00000265304 CFHR5Q9BXR6 569 aa16.73■□□□□ 0.27
SSBP1-201ENST00000265304 UPF3BQ9BZI7 483 aaKnown RBP16.73■□□□□ 0.27
SSBP1-201ENST00000265304 AGTPBP1Q9UPW5 1226 aa16.73■□□□□ 0.27
SSBP1-201ENST00000265304 NID2Q14112 1375 aa16.73■□□□□ 0.27
SSBP1-201ENST00000265304 PCNTO95613 3336 aa16.73■□□□□ 0.27
SSBP1-201ENST00000265304 CCL15-CCL14A0A0B4J2E2 113 aa16.72■□□□□ 0.27
SSBP1-201ENST00000265304 PDHBP11177 359 aa16.72■□□□□ 0.27
SSBP1-201ENST00000265304 VCAM1P19320 739 aa16.72■□□□□ 0.27
SSBP1-201ENST00000265304 SREBF2Q12772 1141 aa16.72■□□□□ 0.27
SSBP1-201ENST00000265304 CCL15Q16663 113 aa16.72■□□□□ 0.27
SSBP1-201ENST00000265304 BTNL9Q6UXG8 535 aa16.72■□□□□ 0.27
SSBP1-201ENST00000265304 LBX2Q6XYB7 198 aa16.72■□□□□ 0.27
SSBP1-201ENST00000265304 Q6ZUG5 572 aa16.72■□□□□ 0.27
SSBP1-201ENST00000265304 DCAF4Q8WV16 495 aa16.72■□□□□ 0.27
SSBP1-201ENST00000265304 TMOD4Q9NZQ9 345 aa16.72■□□□□ 0.27
SSBP1-201ENST00000265304 ADAMTS5Q9UNA0 930 aa16.72■□□□□ 0.27
SSBP1-201ENST00000265304 MYPNQ86TC9 1320 aa16.71■□□□□ 0.27
SSBP1-201ENST00000265304 BTBD19C9JJ37 291 aa16.71■□□□□ 0.27
SSBP1-201ENST00000265304 DDAH1O94760 285 aa16.71■□□□□ 0.27
SSBP1-201ENST00000265304 SMARCA1P28370 1054 aa16.71■□□□□ 0.27
SSBP1-201ENST00000265304 PPP2R5BQ15173 497 aa16.71■□□□□ 0.27
SSBP1-201ENST00000265304 SLFN13Q68D06 897 aa16.71■□□□□ 0.27
SSBP1-201ENST00000265304 APOA5Q6Q788 366 aa16.71■□□□□ 0.27
SSBP1-201ENST00000265304 CATSPERGQ6ZRH7 1159 aa16.71■□□□□ 0.27
SSBP1-201ENST00000265304 LRRC47Q8N1G4 583 aaKnown RBP16.71■□□□□ 0.27
SSBP1-201ENST00000265304 ZNF274Q96GC6 653 aaPredicted RBP16.71■□□□□ 0.27
SSBP1-201ENST00000265304 TCEANC2Q96MN5 208 aa16.71■□□□□ 0.27
SSBP1-201ENST00000265304 FEZ1Q99689 392 aa16.71■□□□□ 0.27
SSBP1-201ENST00000265304 KAT14Q9H8E8 782 aa16.71■□□□□ 0.27
SSBP1-201ENST00000265304 PDRG1Q9NUG6 133 aa16.71■□□□□ 0.27
SSBP1-201ENST00000265304 BRPF3Q9ULD4 1205 aa16.71■□□□□ 0.27
SSBP1-201ENST00000265304 PALM3A6NDB9 673 aaPredicted RBP16.7■□□□□ 0.26
SSBP1-201ENST00000265304 USP17L15C9J2P7 530 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms