RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 MOGSQ13724 837 aa19.54■□□□□ 0.72
CHCHD3-201ENST00000262570 SART3Q15020 963 aaKnown RBP19.54■□□□□ 0.72
CHCHD3-201ENST00000262570 USP17L2Q6R6M4 530 aa19.54■□□□□ 0.72
CHCHD3-201ENST00000262570 TMEM87BQ96K49 555 aa19.54■□□□□ 0.72
CHCHD3-201ENST00000262570 TMEM47Q9BQJ4 181 aa19.54■□□□□ 0.72
CHCHD3-201ENST00000262570 EMILIN3Q9NT22 766 aa19.54■□□□□ 0.72
CHCHD3-201ENST00000262570 PCNTO95613 3336 aa19.54■□□□□ 0.72
CHCHD3-201ENST00000262570 CCL15-CCL14A0A0B4J2E2 113 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 ERICH2A1L162 156 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 TOP1P11387 765 aaKnown RBP19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 MAP2K2P36507 400 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 INHBEP58166 350 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 DGKZQ13574 1117 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 ZYXQ15942 572 aaKnown RBP19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 CCL15Q16663 113 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 RUFY3Q7L099 469 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 FASTKD5Q7L8L6 764 aaKnown RBP19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 LRRC47Q8N1G4 583 aaKnown RBP19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 DNAJC5GQ8N7S2 189 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 BRI3BPQ8WY22 251 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 C12orf42Q96LP6 360 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 TBC1D32Q96NH3 1257 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 VCPKMTQ9H867 229 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 RPS6KB1P23443 525 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 TMEM67Q5HYA8 995 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 PROCA1Q8NCQ7 364 aaPredicted RBP19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 TCEANC2Q96MN5 208 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 KIF2CQ99661 725 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 LRRC2Q9BYS8 371 aa19.53■□□□□ 0.72
CHCHD3-201ENST00000262570 F5H6K3 240 aa19.52■□□□□ 0.71
CHCHD3-201ENST00000262570 SH2B2O14492 632 aaPredicted RBP19.52■□□□□ 0.71
CHCHD3-201ENST00000262570 TM4SF4P48230 202 aa19.52■□□□□ 0.71
CHCHD3-201ENST00000262570 KLRC3Q07444 240 aa19.52■□□□□ 0.71
CHCHD3-201ENST00000262570 WTAPQ15007 396 aa19.52■□□□□ 0.71
CHCHD3-201ENST00000262570 KIAA1755Q5JYT7 1200 aa19.52■□□□□ 0.71
CHCHD3-201ENST00000262570 IFIT1BQ5T764 474 aaKnown RBP19.52■□□□□ 0.71
CHCHD3-201ENST00000262570 GMCL1P1Q8NEA9 526 aa19.52■□□□□ 0.71
CHCHD3-201ENST00000262570 PTPN18Q99952 460 aa19.52■□□□□ 0.71
CHCHD3-201ENST00000262570 UPF3BQ9BZI7 483 aaKnown RBP19.52■□□□□ 0.71
CHCHD3-201ENST00000262570 SENP2Q9HC62 589 aa19.52■□□□□ 0.71
CHCHD3-201ENST00000262570 GOPCQ9HD26 462 aa19.52■□□□□ 0.71
CHCHD3-201ENST00000262570 GPHNQ9NQX3 736 aaPredicted RBP19.52■□□□□ 0.71
CHCHD3-201ENST00000262570 TMOD4Q9NZQ9 345 aa19.52■□□□□ 0.71
CHCHD3-201ENST00000262570 CYP46A1Q9Y6A2 500 aa19.52■□□□□ 0.71
CHCHD3-201ENST00000262570 LIFRP42702 1097 aa19.51■□□□□ 0.71
CHCHD3-201ENST00000262570 SREBF2Q12772 1141 aa19.51■□□□□ 0.71
CHCHD3-201ENST00000262570 GADL1Q6ZQY3 521 aa19.51■□□□□ 0.71
CHCHD3-201ENST00000262570 REM2Q8IYK8 340 aaPredicted RBP19.51■□□□□ 0.71
CHCHD3-201ENST00000262570 LPAR1Q92633 364 aa19.51■□□□□ 0.71
CHCHD3-201ENST00000262570 LY9Q9HBG7 655 aa19.51■□□□□ 0.71
CHCHD3-201ENST00000262570 VCAM1P19320 739 aa19.5■□□□□ 0.71
CHCHD3-201ENST00000262570 GPAT2Q6NUI2 795 aa19.5■□□□□ 0.71
CHCHD3-201ENST00000262570 SPICE1Q8N0Z3 855 aa19.5■□□□□ 0.71
CHCHD3-201ENST00000262570 TMTC2Q8N394 836 aa19.5■□□□□ 0.71
CHCHD3-201ENST00000262570 FBXL16Q8N461 479 aa19.5■□□□□ 0.71
CHCHD3-201ENST00000262570 KAT14Q9H8E8 782 aa19.5■□□□□ 0.71
CHCHD3-201ENST00000262570 PTPRFP10586 1907 aa19.5■□□□□ 0.71
CHCHD3-201ENST00000262570 BTBD19C9JJ37 291 aa19.49■□□□□ 0.71
CHCHD3-201ENST00000262570 NDUFB10O96000 172 aa19.49■□□□□ 0.71
CHCHD3-201ENST00000262570 TREML2Q5T2D2 321 aa19.49■□□□□ 0.71
CHCHD3-201ENST00000262570 SGMS1Q86VZ5 419 aa19.49■□□□□ 0.71
CHCHD3-201ENST00000262570 PNMA1Q8ND90 353 aa19.49■□□□□ 0.71
CHCHD3-201ENST00000262570 AGXT2Q9BYV1 514 aa19.49■□□□□ 0.71
CHCHD3-201ENST00000262570 AGTPBP1Q9UPW5 1226 aa19.49■□□□□ 0.71
CHCHD3-201ENST00000262570 IGF2BP3O00425 579 aaKnown RBP eCLIP19.49■□□□□ 0.71
CHCHD3-201ENST00000262570 RAD21O60216 631 aa19.49■□□□□ 0.71
CHCHD3-201ENST00000262570 SLFN13Q68D06 897 aa19.49■□□□□ 0.71
CHCHD3-201ENST00000262570 Q6ZUG5 572 aa19.49■□□□□ 0.71
CHCHD3-201ENST00000262570 ANKRD23Q86SG2 305 aa19.49■□□□□ 0.71
CHCHD3-201ENST00000262570 IFNL1Q8IU54 200 aa19.49■□□□□ 0.71
CHCHD3-201ENST00000262570 FAM43AQ8N2R8 423 aa19.49■□□□□ 0.71
CHCHD3-201ENST00000262570 MYH4Q9Y623 1939 aa19.48■□□□□ 0.71
CHCHD3-201ENST00000262570 WDR46O15213 610 aaKnown RBP19.48■□□□□ 0.71
CHCHD3-201ENST00000262570 HOXA7P31268 230 aaPredicted RBP19.48■□□□□ 0.71
CHCHD3-201ENST00000262570 GMCL1Q96IK5 515 aa19.48■□□□□ 0.71
CHCHD3-201ENST00000262570 SNHG28P0DPA3 235 aa19.47■□□□□ 0.71
CHCHD3-201ENST00000262570 RPAP3Q9H6T3 665 aaPredicted RBP19.47■□□□□ 0.71
CHCHD3-201ENST00000262570 PDRG1Q9NUG6 133 aa19.47■□□□□ 0.71
CHCHD3-201ENST00000262570 SLC45A1Q9Y2W3 748 aa19.47■□□□□ 0.71
CHCHD3-201ENST00000262570 LOC285556D6RIA3 1793 aa19.46■□□□□ 0.71
CHCHD3-201ENST00000262570 THSD7BQ9C0I4 1608 aa19.46■□□□□ 0.71
CHCHD3-201ENST00000262570 PDHBP11177 359 aa19.46■□□□□ 0.71
CHCHD3-201ENST00000262570 SLC1A4P43007 532 aa19.46■□□□□ 0.71
CHCHD3-201ENST00000262570 NEK4P51957 841 aa19.46■□□□□ 0.71
CHCHD3-201ENST00000262570 FGD1P98174 961 aa19.46■□□□□ 0.71
CHCHD3-201ENST00000262570 TROAPQ12815 778 aa19.46■□□□□ 0.71
CHCHD3-201ENST00000262570 OTUD7BQ6GQQ9 843 aa19.46■□□□□ 0.71
CHCHD3-201ENST00000262570 NFXL1Q6ZNB6 911 aa19.46■□□□□ 0.71
CHCHD3-201ENST00000262570 BRF1Q92994 677 aa19.46■□□□□ 0.71
CHCHD3-201ENST00000262570 ALDH8A1Q9H2A2 487 aaPredicted RBP19.46■□□□□ 0.71
CHCHD3-201ENST00000262570 ZCCHC17Q9NP64 241 aaKnown RBP19.46■□□□□ 0.71
CHCHD3-201ENST00000262570 MTMR7Q9Y216 660 aa19.46■□□□□ 0.71
CHCHD3-201ENST00000262570 CCDC69A6NI79 296 aa19.45■□□□□ 0.7
CHCHD3-201ENST00000262570 USP17L15C9J2P7 530 aa19.45■□□□□ 0.7
CHCHD3-201ENST00000262570 USP17L13C9JLJ4 530 aa19.45■□□□□ 0.7
CHCHD3-201ENST00000262570 USP17L11C9JVI0 530 aa19.45■□□□□ 0.7
CHCHD3-201ENST00000262570 USP17L18D6R9N7 530 aa19.45■□□□□ 0.7
CHCHD3-201ENST00000262570 USP17L22D6RA61 530 aa19.45■□□□□ 0.7
CHCHD3-201ENST00000262570 USP17L17D6RBQ6 530 aa19.45■□□□□ 0.7
CHCHD3-201ENST00000262570 USP17L19D6RCP7 530 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms