RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 CCDC196A0A1B0GTZ2 297 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 STARD3NLO95772 234 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 PKN1Q16512 942 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 NAPGQ99747 312 aaPredicted RBP20.33■□□□□ 0.85
TRAF4-201ENST00000262395 HINFPQ9BQA5 517 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 L1RE1Q9UN81 338 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 ZBTB1Q9Y2K1 713 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 TNS3Q68CZ2 1445 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 CTAGE15A4D2H0 777 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 CTAGE8P0CG41 777 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 KRT2P35908 639 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 PPARAQ07869 468 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 PTGDRQ13258 359 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 CTAGE6Q86UF2 777 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 CNGA4Q8IV77 575 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 CTAGE4Q8IX94 777 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 EXOC4Q96A65 974 aa20.33■□□□□ 0.85
TRAF4-201ENST00000262395 NAA15Q9BXJ9 866 aaKnown RBP20.33■□□□□ 0.85
TRAF4-201ENST00000262395 ADAMTSL3P82987 1691 aa20.33■□□□□ 0.84
TRAF4-201ENST00000262395 ADAMTS3O15072 1205 aa20.33■□□□□ 0.84
TRAF4-201ENST00000262395 SLC5A1P13866 664 aa20.33■□□□□ 0.84
TRAF4-201ENST00000262395 PLEKHA4Q9H4M7 779 aa20.33■□□□□ 0.84
TRAF4-201ENST00000262395 ABHD10Q9NUJ1 306 aa20.33■□□□□ 0.84
TRAF4-201ENST00000262395 PDE8AO60658 829 aa20.32■□□□□ 0.84
TRAF4-201ENST00000262395 KRT9P35527 623 aa20.32■□□□□ 0.84
TRAF4-201ENST00000262395 XDHP47989 1333 aa20.32■□□□□ 0.84
TRAF4-201ENST00000262395 WTIPA6NIX2 430 aaPredicted RBP20.32■□□□□ 0.84
TRAF4-201ENST00000262395 ANKRD65E5RJM6 399 aa20.32■□□□□ 0.84
TRAF4-201ENST00000262395 FGFR2P21802 821 aa20.32■□□□□ 0.84
TRAF4-201ENST00000262395 EVX2Q03828 476 aa20.32■□□□□ 0.84
TRAF4-201ENST00000262395 MUM1L1Q5H9M0 696 aa20.32■□□□□ 0.84
TRAF4-201ENST00000262395 SH3RF1Q7Z6J0 888 aa20.32■□□□□ 0.84
TRAF4-201ENST00000262395 CDHR2Q9BYE9 1310 aa20.31■□□□□ 0.84
TRAF4-201ENST00000262395 SRGAP2O75044 1071 aa20.31■□□□□ 0.84
TRAF4-201ENST00000262395 ERLIN1O75477 346 aa20.31■□□□□ 0.84
TRAF4-201ENST00000262395 CYP7A1P22680 504 aa20.31■□□□□ 0.84
TRAF4-201ENST00000262395 ARHGAP25P42331 645 aa20.31■□□□□ 0.84
TRAF4-201ENST00000262395 EVA1CP58658 441 aa20.31■□□□□ 0.84
TRAF4-201ENST00000262395 CASP8Q14790 479 aa20.31■□□□□ 0.84
TRAF4-201ENST00000262395 NKX1-1Q15270 411 aaPredicted RBP20.31■□□□□ 0.84
TRAF4-201ENST00000262395 CTAGE1Q96RT6 745 aa20.31■□□□□ 0.84
TRAF4-201ENST00000262395 GDAQ9Y2T3 454 aa20.31■□□□□ 0.84
TRAF4-201ENST00000262395 A0A0G2JS52 829 aa20.31■□□□□ 0.84
TRAF4-201ENST00000262395 ZMYND10O75800 440 aa20.31■□□□□ 0.84
TRAF4-201ENST00000262395 VEGFAP15692 232 aaPredicted RBP20.31■□□□□ 0.84
TRAF4-201ENST00000262395 MCM7P33993 719 aa20.31■□□□□ 0.84
TRAF4-201ENST00000262395 MSANTD4Q8NCY6 345 aa20.31■□□□□ 0.84
TRAF4-201ENST00000262395 LRRIQ3A6PVS8 624 aaPredicted RBP20.3■□□□□ 0.84
TRAF4-201ENST00000262395 MYO1CO00159 1063 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 ENAHQ8N8S7 591 aaPredicted RBP20.3■□□□□ 0.84
TRAF4-201ENST00000262395 GSDMAQ96QA5 445 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 RAB21Q9UL25 225 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 TTF2Q9UNY4 1162 aaKnown RBP20.3■□□□□ 0.84
TRAF4-201ENST00000262395 UBR2Q8IWV8 1755 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 TRIM49BA6NDI0 452 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 ACTN2P35609 894 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 COPB1P53618 953 aaKnown RBP20.3■□□□□ 0.84
TRAF4-201ENST00000262395 GOLGA5Q8TBA6 731 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 CAPZA3Q96KX2 299 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 MTRQ99707 1265 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 PHF20Q9BVI0 1012 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 SOS2Q07890 1332 aaPredicted RBP20.3■□□□□ 0.84
TRAF4-201ENST00000262395 UBXN1Q04323 297 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 SLC4A8Q2Y0W8 1093 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 TTC38Q5R3I4 469 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 PIK3AP1Q6ZUJ8 805 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 SLC4A9Q96Q91 983 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 MYO6Q9UM54 1294 aa20.3■□□□□ 0.84
TRAF4-201ENST00000262395 XBP1P17861 261 aa20.29■□□□□ 0.84
TRAF4-201ENST00000262395 HNRNPLLQ8WVV9 542 aaKnown RBP20.29■□□□□ 0.84
TRAF4-201ENST00000262395 NELFBQ8WX92 580 aa20.29■□□□□ 0.84
TRAF4-201ENST00000262395 PLIN2Q99541 437 aa20.29■□□□□ 0.84
TRAF4-201ENST00000262395 NMT2O60551 498 aa20.29■□□□□ 0.84
TRAF4-201ENST00000262395 USP5P45974 858 aa20.29■□□□□ 0.84
TRAF4-201ENST00000262395 SEC23AQ15436 765 aa20.29■□□□□ 0.84
TRAF4-201ENST00000262395 LEKR1Q6ZMV7 388 aa20.29■□□□□ 0.84
TRAF4-201ENST00000262395 TMTC1Q8IUR5 882 aa20.29■□□□□ 0.84
TRAF4-201ENST00000262395 RNF26Q9BY78 433 aaPredicted RBP20.29■□□□□ 0.84
TRAF4-201ENST00000262395 LRP6O75581 1613 aa20.28■□□□□ 0.84
TRAF4-201ENST00000262395 KCNJ18B7U540 433 aa20.28■□□□□ 0.84
TRAF4-201ENST00000262395 KCNJ12Q14500 433 aa20.28■□□□□ 0.84
TRAF4-201ENST00000262395 CYP26C1Q6V0L0 522 aa20.28■□□□□ 0.84
TRAF4-201ENST00000262395 TMTC2Q8N394 836 aa20.28■□□□□ 0.84
TRAF4-201ENST00000262395 CHD4Q14839 1912 aa20.28■□□□□ 0.84
TRAF4-201ENST00000262395 EIF3JO75822 258 aaKnown RBP20.28■□□□□ 0.84
TRAF4-201ENST00000262395 TNNT3P45378 269 aaPredicted RBP20.28■□□□□ 0.84
TRAF4-201ENST00000262395 DYNLL1P63167 89 aaKnown RBP20.28■□□□□ 0.84
TRAF4-201ENST00000262395 IFIT1BQ5T764 474 aaKnown RBP20.28■□□□□ 0.84
TRAF4-201ENST00000262395 REXO2Q9Y3B8 237 aaKnown RBP20.28■□□□□ 0.84
TRAF4-201ENST00000262395 TNS2Q63HR2 1409 aa20.28■□□□□ 0.84
TRAF4-201ENST00000262395 IL17AQ16552 155 aa20.27■□□□□ 0.84
TRAF4-201ENST00000262395 DZIP3Q86Y13 1208 aaKnown RBP20.27■□□□□ 0.84
TRAF4-201ENST00000262395 ESR2Q92731 530 aa20.27■□□□□ 0.84
TRAF4-201ENST00000262395 HSP90B2PQ58FF3 399 aa20.27■□□□□ 0.84
TRAF4-201ENST00000262395 TCP11X2Q5H9J9 407 aa20.27■□□□□ 0.84
TRAF4-201ENST00000262395 GSPT2Q8IYD1 628 aaKnown RBP20.27■□□□□ 0.84
TRAF4-201ENST00000262395 RNF41Q9H4P4 317 aaPredicted RBP20.27■□□□□ 0.84
TRAF4-201ENST00000262395 RRP15Q9Y3B9 282 aaKnown RBP20.27■□□□□ 0.84
TRAF4-201ENST00000262395 MROH5Q6ZUA9 1318 aa20.27■□□□□ 0.84
TRAF4-201ENST00000262395 POTEB2H3BUK9 544 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms