RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 SCRN1Q12765 414 aa32.12■■■□□ 2.73
SMARCD3-201ENST00000262188 BECN1Q14457 450 aa32.12■■■□□ 2.73
SMARCD3-201ENST00000262188 CNKSR2Q8WXI2 1034 aa32.12■■■□□ 2.73
SMARCD3-201ENST00000262188 ZBTB43O43298 467 aa32.12■■■□□ 2.73
SMARCD3-201ENST00000262188 RAD21O60216 631 aa32.12■■■□□ 2.73
SMARCD3-201ENST00000262188 TOP1P11387 765 aaKnown RBP32.12■■■□□ 2.73
SMARCD3-201ENST00000262188 MAP3K9P80192 1104 aa32.12■■■□□ 2.73
SMARCD3-201ENST00000262188 CCDC178Q5BJE1 867 aa32.12■■■□□ 2.73
SMARCD3-201ENST00000262188 TMTC2Q8N394 836 aa32.12■■■□□ 2.73
SMARCD3-201ENST00000262188 SNCAIPQ9Y6H5 919 aa32.12■■■□□ 2.73
SMARCD3-201ENST00000262188 PAPPA2Q9BXP8 1791 aa32.11■■■□□ 2.73
SMARCD3-201ENST00000262188 ZYXQ15942 572 aaKnown RBP32.11■■■□□ 2.73
SMARCD3-201ENST00000262188 ZNF274Q96GC6 653 aaPredicted RBP32.11■■■□□ 2.73
SMARCD3-201ENST00000262188 SLKQ9H2G2 1235 aaPredicted RBP32.11■■■□□ 2.73
SMARCD3-201ENST00000262188 IREB2P48200 963 aaKnown RBP32.1■■■□□ 2.73
SMARCD3-201ENST00000262188 TROAPQ12815 778 aa32.1■■■□□ 2.73
SMARCD3-201ENST00000262188 DGKZQ13574 1117 aa32.1■■■□□ 2.73
SMARCD3-201ENST00000262188 CATIPQ7Z7H3 387 aa32.1■■■□□ 2.73
SMARCD3-201ENST00000262188 NYAP2Q9P242 653 aa32.1■■■□□ 2.73
SMARCD3-201ENST00000262188 CDC27P30260 824 aa32.1■■■□□ 2.73
SMARCD3-201ENST00000262188 CST9Q5W186 159 aa32.1■■■□□ 2.73
SMARCD3-201ENST00000262188 PFKFB2O60825 505 aa32.09■■■□□ 2.73
SMARCD3-201ENST00000262188 PTPRAP18433 802 aa32.09■■■□□ 2.73
SMARCD3-201ENST00000262188 CMTR1Q8N1G2 835 aaKnown RBP32.09■■■□□ 2.73
SMARCD3-201ENST00000262188 ZSCAN31Q96LW9 406 aaPredicted RBP32.09■■■□□ 2.73
SMARCD3-201ENST00000262188 ELP3Q9H9T3 547 aa32.09■■■□□ 2.73
SMARCD3-201ENST00000262188 PICK1Q9NRD5 415 aa32.09■■■□□ 2.73
SMARCD3-201ENST00000262188 GOLGA8AA7E2F4 631 aa32.08■■■□□ 2.73
SMARCD3-201ENST00000262188 METAP2P50579 478 aaKnown RBP eCLIP32.08■■■□□ 2.73
SMARCD3-201ENST00000262188 SYNE3Q6ZMZ3 975 aa32.08■■■□□ 2.73
SMARCD3-201ENST00000262188 FAM217BQ9NTX9 383 aaPredicted RBP32.08■■■□□ 2.73
SMARCD3-201ENST00000262188 ADD1P35611 737 aaKnown RBP32.08■■■□□ 2.73
SMARCD3-201ENST00000262188 KIAA1755Q5JYT7 1200 aa32.08■■■□□ 2.73
SMARCD3-201ENST00000262188 GTF3C6Q969F1 213 aa32.08■■■□□ 2.73
SMARCD3-201ENST00000262188 SH2B1Q9NRF2 756 aaPredicted RBP32.07■■■□□ 2.72
SMARCD3-201ENST00000262188 ZHX2Q9Y6X8 837 aa32.07■■■□□ 2.72
SMARCD3-201ENST00000262188 USP17L5A8MUK1 530 aa32.07■■■□□ 2.72
SMARCD3-201ENST00000262188 GOLGA8HP0CJ92 632 aa32.07■■■□□ 2.72
SMARCD3-201ENST00000262188 NOL9Q5SY16 702 aaKnown RBP32.07■■■□□ 2.72
SMARCD3-201ENST00000262188 ARMC9Q7Z3E5 817 aa32.07■■■□□ 2.72
SMARCD3-201ENST00000262188 SPICE1Q8N0Z3 855 aa32.07■■■□□ 2.72
SMARCD3-201ENST00000262188 GBA2Q9HCG7 927 aaPredicted RBP32.07■■■□□ 2.72
SMARCD3-201ENST00000262188 CSADQ9Y600 493 aa32.07■■■□□ 2.72
SMARCD3-201ENST00000262188 USP17L2Q6R6M4 530 aa32.06■■■□□ 2.72
SMARCD3-201ENST00000262188 MKL1Q969V6 931 aa32.06■■■□□ 2.72
SMARCD3-201ENST00000262188 CLCN1P35523 988 aa32.05■■■□□ 2.72
SMARCD3-201ENST00000262188 MAP3K11Q16584 847 aa32.05■■■□□ 2.72
SMARCD3-201ENST00000262188 STAG2Q8N3U4 1231 aa32.05■■■□□ 2.72
SMARCD3-201ENST00000262188 ARHGEF10LQ9HCE6 1279 aa32.05■■■□□ 2.72
SMARCD3-201ENST00000262188 ANKRD13AQ8IZ07 590 aa32.05■■■□□ 2.72
SMARCD3-201ENST00000262188 CCDC82Q8N4S0 544 aa32.05■■■□□ 2.72
SMARCD3-201ENST00000262188 FANCBQ8NB91 859 aa32.05■■■□□ 2.72
SMARCD3-201ENST00000262188 NUP88Q99567 741 aaPredicted RBP32.05■■■□□ 2.72
SMARCD3-201ENST00000262188 CPVLQ9H3G5 476 aa32.05■■■□□ 2.72
SMARCD3-201ENST00000262188 FRMPD2Q68DX3 1309 aaPredicted RBP32.04■■■□□ 2.72
SMARCD3-201ENST00000262188 TRIM75PA6NK02 468 aa32.04■■■□□ 2.72
SMARCD3-201ENST00000262188 DDAH1O94760 285 aa32.04■■■□□ 2.72
SMARCD3-201ENST00000262188 SPP2Q13103 211 aa32.04■■■□□ 2.72
SMARCD3-201ENST00000262188 CUL4AQ13619 759 aa32.04■■■□□ 2.72
SMARCD3-201ENST00000262188 PLEKHA8P1O95397 391 aa32.03■■■□□ 2.72
SMARCD3-201ENST00000262188 CTDNEP1O95476 244 aa32.03■■■□□ 2.72
SMARCD3-201ENST00000262188 RTN1Q16799 776 aa32.03■■■□□ 2.72
SMARCD3-201ENST00000262188 FEZ1Q99689 392 aa32.03■■■□□ 2.72
SMARCD3-201ENST00000262188 F5H6K3 240 aa32.03■■■□□ 2.72
SMARCD3-201ENST00000262188 JAK2O60674 1132 aa32.03■■■□□ 2.72
SMARCD3-201ENST00000262188 PDHBP11177 359 aa32.03■■■□□ 2.72
SMARCD3-201ENST00000262188 KLRC3Q07444 240 aa32.03■■■□□ 2.72
SMARCD3-201ENST00000262188 RRAGDQ9NQL2 400 aaPredicted RBP32.03■■■□□ 2.72
SMARCD3-201ENST00000262188 TMX2Q9Y320 296 aa32.03■■■□□ 2.72
SMARCD3-201ENST00000262188 PHIPQ8WWQ0 1821 aa32.03■■■□□ 2.72
SMARCD3-201ENST00000262188 MTMR2Q13614 643 aa32.02■■■□□ 2.72
SMARCD3-201ENST00000262188 LDLRAD1Q5T700 205 aa32.02■■■□□ 2.72
SMARCD3-201ENST00000262188 SMC1BQ8NDV3 1235 aa32.02■■■□□ 2.72
SMARCD3-201ENST00000262188 NDUFB10O96000 172 aa32.01■■■□□ 2.72
SMARCD3-201ENST00000262188 SLFN13Q68D06 897 aa32.01■■■□□ 2.72
SMARCD3-201ENST00000262188 OTUD5Q96G74 571 aa32.01■■■□□ 2.72
SMARCD3-201ENST00000262188 MAD2L2Q9UI95 211 aa32.01■■■□□ 2.72
SMARCD3-201ENST00000262188 ISY1Q9ULR0 285 aaKnown RBP32.01■■■□□ 2.72
SMARCD3-201ENST00000262188 PASKQ96RG2 1323 aa32.01■■■□□ 2.71
SMARCD3-201ENST00000262188 KCTD1Q719H9 257 aa32.01■■■□□ 2.71
SMARCD3-201ENST00000262188 NBPF11Q86T75 865 aa32.01■■■□□ 2.71
SMARCD3-201ENST00000262188 C2orf69Q8N8R5 385 aa32.01■■■□□ 2.71
SMARCD3-201ENST00000262188 GINM1Q9NU53 330 aa32.01■■■□□ 2.71
SMARCD3-201ENST00000262188 TOMM70O94826 608 aa32■■■□□ 2.71
SMARCD3-201ENST00000262188 GRM4Q14833 912 aa32■■■□□ 2.71
SMARCD3-201ENST00000262188 GPCPD1Q9NPB8 672 aa32■■■□□ 2.71
SMARCD3-201ENST00000262188 TRPM7Q96QT4 1865 aa32■■■□□ 2.71
SMARCD3-201ENST00000262188 RBM10P98175 930 aaKnown RBP31.99■■■□□ 2.71
SMARCD3-201ENST00000262188 PPP4R3BQ5MIZ7 849 aa31.99■■■□□ 2.71
SMARCD3-201ENST00000262188 ZNF280CQ8ND82 737 aa31.99■■■□□ 2.71
SMARCD3-201ENST00000262188 CTCFLQ8NI51 663 aaPredicted RBP31.99■■■□□ 2.71
SMARCD3-201ENST00000262188 PHKBQ93100 1093 aa31.99■■■□□ 2.71
SMARCD3-201ENST00000262188 DDX11Q96FC9 970 aa31.99■■■□□ 2.71
SMARCD3-201ENST00000262188 CALM1P0DP23 149 aa31.98■■■□□ 2.71
SMARCD3-201ENST00000262188 CALM2P0DP24 149 aa31.98■■■□□ 2.71
SMARCD3-201ENST00000262188 CALM3P0DP25 149 aa31.98■■■□□ 2.71
SMARCD3-201ENST00000262188 CCDC96Q2M329 555 aa31.98■■■□□ 2.71
SMARCD3-201ENST00000262188 SLC35G1Q2M3R5 365 aa31.98■■■□□ 2.71
SMARCD3-201ENST00000262188 TTBK2Q6IQ55 1244 aa31.98■■■□□ 2.71
SMARCD3-201ENST00000262188 AFG3L2Q9Y4W6 797 aa31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms