RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 SNW1Q13573 536 aaKnown RBP15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 ASIC2Q16515 512 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 HSP90AA4PQ58FG1 418 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 C6orf163Q5TEZ5 329 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 DDX23Q9BUQ8 820 aaKnown RBP15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 A2ML1A8K2U0 1454 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 KRT86O43790 486 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 TERF1P54274 439 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 DMP1Q13316 513 aaPredicted RBP15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 HERC4Q5GLZ8 1057 aaPredicted RBP15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 CEP128Q6ZU80 1094 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 PLEKHM2Q8IWE5 1019 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 AOPEPQ8N6M6 819 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 CIAO1O76071 339 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 DDAH1O94760 285 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 ANO6Q4KMQ2 910 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 LEO1Q8WVC0 666 aaPredicted RBP15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 KCNQ3O43525 872 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 BCRP11274 1271 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 IFNL3Q8IZI9 196 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 MICAL1Q8TDZ2 1067 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 PRPF31Q8WWY3 499 aaKnown RBP15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 ZNF341Q9BYN7 854 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 RABGAP1Q9Y3P9 1069 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 FOSP01100 380 aaPredicted RBP15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 HSPA1LP34931 641 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 MMS19Q96T76 1030 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 ZBTB40Q9NUA8 1239 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 PCDHB13Q9Y5F0 798 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 ROBO2Q9HCK4 1378 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 MYOM2P54296 1465 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 TTLL1O95922 423 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 SYNE4Q8N205 404 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 ATP8B3O60423 1300 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 GOLGA6CA6NDK9 693 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 GOLGA6BA6NDN3 693 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 GOLGA6DP0CG33 693 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 MFSD14CQ5VZR4 134 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 GOLGA6AQ9NYA3 693 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 KCNH4Q9UQ05 1017 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 USP6P35125 1406 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 SPOPO43791 374 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 INF2Q27J81 1249 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 SPECC1LQ69YQ0 1117 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 GALNT17Q6IS24 598 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 PARP2Q9UGN5 583 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 PCDHB15Q9Y5E8 787 aa15.09■□□□□ 0.01
PDGFRB-201ENST00000261799 PPP2R5AQ15172 486 aa15.08■□□□□ 0.01
PDGFRB-201ENST00000261799 DIS3L2Q8IYB7 885 aaKnown RBP15.08■□□□□ 0.01
PDGFRB-201ENST00000261799 UIMC1Q96RL1 719 aa15.08■□□□□ 0.01
PDGFRB-201ENST00000261799 NUB1Q9Y5A7 615 aa15.08■□□□□ 0.01
PDGFRB-201ENST00000261799 KIF24Q5T7B8 1368 aa15.08■□□□□ 0.01
PDGFRB-201ENST00000261799 CAPN9O14815 690 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 DNM1Q05193 864 aaKnown RBP15.08■□□□□ 0
PDGFRB-201ENST00000261799 ASPRV1Q53RT3 343 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 DCUN1D2Q6PH85 259 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 CDHR1Q96JP9 859 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 ERCC5P28715 1186 aaPredicted RBP15.08■□□□□ 0
PDGFRB-201ENST00000261799 SLC17A8Q8NDX2 589 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 IL17REQ8NFR9 667 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 APOL6Q9BWW8 343 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 GPBP1L1Q9HC44 474 aaPredicted RBP15.08■□□□□ 0
PDGFRB-201ENST00000261799 SEPT9Q9UHD8 586 aaPredicted RBP15.08■□□□□ 0
PDGFRB-201ENST00000261799 TNS3Q68CZ2 1445 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 Q3C1V9 767 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 CTR9Q6PD62 1173 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 MICALCLQ6ZW33 695 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 GOLGA5Q8TBA6 731 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 CARMIL3Q8ND23 1372 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 GDF11O95390 407 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 GNG11P61952 73 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 IFRD2Q12894 506 aaPredicted RBP15.08■□□□□ 0
PDGFRB-201ENST00000261799 ATP6V0A1Q93050 837 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 MYL10Q9BUA6 226 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 KANSL2Q9H9L4 492 aa15.08■□□□□ 0
PDGFRB-201ENST00000261799 PTPREP23469 700 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 R3HDM1Q15032 1099 aaKnown RBP15.07■□□□□ 0
PDGFRB-201ENST00000261799 SDR42E1Q8WUS8 393 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 AMNQ9BXJ7 453 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 CACYBPQ9HB71 228 aaKnown RBP15.07■□□□□ 0
PDGFRB-201ENST00000261799 PI4KBQ9UBF8 816 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 DDX25Q9UHL0 483 aaKnown RBP15.07■□□□□ 0
PDGFRB-201ENST00000261799 ZBTB7BO15156 539 aaPredicted RBP15.07■□□□□ 0
PDGFRB-201ENST00000261799 TBC1D10BQ4KMP7 808 aaPredicted RBP15.07■□□□□ 0
PDGFRB-201ENST00000261799 GPATCH4Q5T3I0 446 aaKnown RBP15.07■□□□□ 0
PDGFRB-201ENST00000261799 PPP1R21Q6ZMI0 780 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 PIGBQ92521 554 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 PAIP2Q9BPZ3 127 aaKnown RBP15.07■□□□□ 0
PDGFRB-201ENST00000261799 PDE6AP16499 860 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 GIMAP6Q6P9H5 292 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 CLEC4GQ6UXB4 293 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 PNMA1Q8ND90 353 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 TBC1D32Q96NH3 1257 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 TBC1D7Q9P0N9 293 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 PCDHA1Q9Y5I3 950 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 K7ENM7 598 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 GNAT1P11488 350 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 FAM160B2Q86V87 743 aa15.07■□□□□ 0
PDGFRB-201ENST00000261799 CUTAO60888 179 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 CSPG5O95196 566 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms