RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 GOLGA8AA7E2F4 631 aa13.43□□□□□ -0.26
TREM1-201ENST00000244709 USP17L5A8MUK1 530 aa13.43□□□□□ -0.26
TREM1-201ENST00000244709 DDAH1O94760 285 aa13.43□□□□□ -0.26
TREM1-201ENST00000244709 PTPRAP18433 802 aa13.43□□□□□ -0.26
TREM1-201ENST00000244709 ECE1P42892 770 aa13.43□□□□□ -0.26
TREM1-201ENST00000244709 METAP2P50579 478 aaKnown RBP eCLIP13.43□□□□□ -0.26
TREM1-201ENST00000244709 TROAPQ12815 778 aa13.43□□□□□ -0.26
TREM1-201ENST00000244709 CCDC83Q8IWF9 413 aa13.43□□□□□ -0.26
TREM1-201ENST00000244709 GTF3C6Q969F1 213 aa13.43□□□□□ -0.26
TREM1-201ENST00000244709 CHMP4CQ96CF2 233 aa13.43□□□□□ -0.26
TREM1-201ENST00000244709 CLMNQ96JQ2 1002 aa13.43□□□□□ -0.26
TREM1-201ENST00000244709 NCOA5Q9HCD5 579 aaKnown RBP13.43□□□□□ -0.26
TREM1-201ENST00000244709 GBA2Q9HCG7 927 aaPredicted RBP13.43□□□□□ -0.26
TREM1-201ENST00000244709 CSADQ9Y600 493 aa13.43□□□□□ -0.26
TREM1-201ENST00000244709 PTPRFP10586 1907 aa13.43□□□□□ -0.26
TREM1-201ENST00000244709 NID2Q14112 1375 aa13.43□□□□□ -0.26
TREM1-201ENST00000244709 UBE2Q2LH0YL09 131 aa13.42□□□□□ -0.26
TREM1-201ENST00000244709 ANKRD13AQ8IZ07 590 aa13.42□□□□□ -0.26
TREM1-201ENST00000244709 SMC1BQ8NDV3 1235 aa13.42□□□□□ -0.26
TREM1-201ENST00000244709 ELP3Q9H9T3 547 aa13.42□□□□□ -0.26
TREM1-201ENST00000244709 PASKQ96RG2 1323 aa13.42□□□□□ -0.26
TREM1-201ENST00000244709 CDC27P30260 824 aa13.41□□□□□ -0.26
TREM1-201ENST00000244709 RCAN1P53805 252 aa13.41□□□□□ -0.26
TREM1-201ENST00000244709 FKBP1BP68106 108 aa13.41□□□□□ -0.26
TREM1-201ENST00000244709 CUL4AQ13619 759 aa13.41□□□□□ -0.26
TREM1-201ENST00000244709 RTN1Q16799 776 aa13.41□□□□□ -0.26
TREM1-201ENST00000244709 CST9Q5W186 159 aa13.41□□□□□ -0.26
TREM1-201ENST00000244709 RBM46Q8TBY0 533 aaKnown RBP13.41□□□□□ -0.26
TREM1-201ENST00000244709 IPO9Q96P70 1041 aaKnown RBP13.41□□□□□ -0.26
TREM1-201ENST00000244709 TMX2Q9Y320 296 aa13.41□□□□□ -0.26
TREM1-201ENST00000244709 ZHX2Q9Y6X8 837 aa13.41□□□□□ -0.26
TREM1-201ENST00000244709 MYH6P13533 1939 aa13.41□□□□□ -0.26
TREM1-201ENST00000244709 RAD21O60216 631 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 TOMM70O94826 608 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 CALM1P0DP23 149 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 CALM2P0DP24 149 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 CALM3P0DP25 149 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 PDHBP11177 359 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 GRM4Q14833 912 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 LDLRAD1Q5T700 205 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 C2orf69Q8N8R5 385 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 FANCBQ8NB91 859 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 SPRYD3Q8NCJ5 442 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 AS3MTQ9HBK9 375 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 FAM217BQ9NTX9 383 aaPredicted RBP13.4□□□□□ -0.26
TREM1-201ENST00000244709 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 DTNBO60941 627 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 ADD1P35611 737 aaKnown RBP13.4□□□□□ -0.26
TREM1-201ENST00000244709 ZYXQ15942 572 aaKnown RBP13.4□□□□□ -0.26
TREM1-201ENST00000244709 KIAA1755Q5JYT7 1200 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 SLFN13Q68D06 897 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 USP17L2Q6R6M4 530 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 ZNF280CQ8ND82 737 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 GMCL1P1Q8NEA9 526 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 CTCFLQ8NI51 663 aaPredicted RBP13.4□□□□□ -0.26
TREM1-201ENST00000244709 MAP3K14Q99558 947 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 FEZ1Q99689 392 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 WDR18Q9BV38 432 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 SH2D4AQ9H788 454 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 MAD2L2Q9UI95 211 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 SYNPO2Q9UMS6 1093 aa13.4□□□□□ -0.26
TREM1-201ENST00000244709 BAZ2BQ9UIF8 2168 aaKnown RBP13.4□□□□□ -0.27
TREM1-201ENST00000244709 FRMPD2Q68DX3 1309 aaPredicted RBP13.39□□□□□ -0.27
TREM1-201ENST00000244709 F5H6K3 240 aa13.39□□□□□ -0.27
TREM1-201ENST00000244709 NDUFB10O96000 172 aa13.39□□□□□ -0.27
TREM1-201ENST00000244709 SNHG28P0DPA3 235 aa13.39□□□□□ -0.27
TREM1-201ENST00000244709 KLRC3Q07444 240 aa13.39□□□□□ -0.27
TREM1-201ENST00000244709 SPP2Q13103 211 aa13.39□□□□□ -0.27
TREM1-201ENST00000244709 DGKZQ13574 1117 aa13.39□□□□□ -0.27
TREM1-201ENST00000244709 MTMR2Q13614 643 aa13.39□□□□□ -0.27
TREM1-201ENST00000244709 STAG2Q8N3U4 1231 aa13.39□□□□□ -0.27
TREM1-201ENST00000244709 VCPKMTQ9H867 229 aa13.39□□□□□ -0.27
TREM1-201ENST00000244709 GOPCQ9HD26 462 aa13.39□□□□□ -0.27
TREM1-201ENST00000244709 RBM28Q9NW13 759 aaKnown RBP13.39□□□□□ -0.27
TREM1-201ENST00000244709 AFG3L2Q9Y4W6 797 aa13.39□□□□□ -0.27
TREM1-201ENST00000244709 PALM3A6NDB9 673 aaPredicted RBP13.38□□□□□ -0.27
TREM1-201ENST00000244709 SPDYE5A6NIY4 337 aa13.38□□□□□ -0.27
TREM1-201ENST00000244709 TRIM75PA6NK02 468 aa13.38□□□□□ -0.27
TREM1-201ENST00000244709 USP17L10C9JJH3 530 aa13.38□□□□□ -0.27
TREM1-201ENST00000244709 PLEKHA8P1O95397 391 aa13.38□□□□□ -0.27
TREM1-201ENST00000244709 CTDNEP1O95476 244 aa13.38□□□□□ -0.27
TREM1-201ENST00000244709 HSP90AA1P07900 732 aaKnown RBP13.38□□□□□ -0.27
TREM1-201ENST00000244709 PARP1P09874 1014 aaKnown RBP13.38□□□□□ -0.27
TREM1-201ENST00000244709 GOLGA8HP0CJ92 632 aa13.38□□□□□ -0.27
TREM1-201ENST00000244709 BACE1P56817 501 aa13.38□□□□□ -0.27
TREM1-201ENST00000244709 CCDC96Q2M329 555 aa13.38□□□□□ -0.27
TREM1-201ENST00000244709 ERO1BQ86YB8 467 aa13.38□□□□□ -0.27
TREM1-201ENST00000244709 SPICE1Q8N0Z3 855 aa13.38□□□□□ -0.27
TREM1-201ENST00000244709 CMTR1Q8N1G2 835 aaKnown RBP13.38□□□□□ -0.27
TREM1-201ENST00000244709 DCAF4Q8WV16 495 aa13.38□□□□□ -0.27
TREM1-201ENST00000244709 OTUD5Q96G74 571 aa13.38□□□□□ -0.27
TREM1-201ENST00000244709 KIAA1683Q9H0B3 1180 aa13.38□□□□□ -0.27
TREM1-201ENST00000244709 DAXXQ9UER7 740 aaPredicted RBP13.38□□□□□ -0.27
TREM1-201ENST00000244709 LOC285556D6RIA3 1793 aa13.38□□□□□ -0.27
TREM1-201ENST00000244709 CCDC196A0A1B0GTZ2 297 aa13.37□□□□□ -0.27
TREM1-201ENST00000244709 UNCXA6NJT0 531 aa13.37□□□□□ -0.27
TREM1-201ENST00000244709 CPLX1O14810 134 aa13.37□□□□□ -0.27
TREM1-201ENST00000244709 JAK2O60674 1132 aa13.37□□□□□ -0.27
TREM1-201ENST00000244709 PPFIA3O75145 1194 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms