RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 PPP2R2CQ9Y2T4 447 aa16.39■□□□□ 0.21
HIF3A-202ENST00000244303 CCDC88AQ3V6T2 1871 aa16.39■□□□□ 0.21
HIF3A-202ENST00000244303 THSD7AQ9UPZ6 1657 aa16.39■□□□□ 0.21
HIF3A-202ENST00000244303 SPATA31A6Q5VVP1 1343 aa16.39■□□□□ 0.21
HIF3A-202ENST00000244303 VWA3AA6NCI4 1184 aa16.39■□□□□ 0.21
HIF3A-202ENST00000244303 CALM1P0DP23 149 aa16.39■□□□□ 0.21
HIF3A-202ENST00000244303 CALM2P0DP24 149 aa16.39■□□□□ 0.21
HIF3A-202ENST00000244303 CALM3P0DP25 149 aa16.39■□□□□ 0.21
HIF3A-202ENST00000244303 KLRK1P26718 216 aa16.39■□□□□ 0.21
HIF3A-202ENST00000244303 CASP1P29466 404 aa16.39■□□□□ 0.21
HIF3A-202ENST00000244303 TMTC3Q6ZXV5 915 aa16.39■□□□□ 0.21
HIF3A-202ENST00000244303 CNTNAP5Q8WYK1 1306 aa16.38■□□□□ 0.21
HIF3A-202ENST00000244303 NMT2O60551 498 aa16.38■□□□□ 0.21
HIF3A-202ENST00000244303 SLFN14P0C7P3 912 aa16.38■□□□□ 0.21
HIF3A-202ENST00000244303 PCP11498 1178 aaKnown RBP16.38■□□□□ 0.21
HIF3A-202ENST00000244303 ERCC5P28715 1186 aaPredicted RBP16.38■□□□□ 0.21
HIF3A-202ENST00000244303 ZNF174Q15697 407 aa16.38■□□□□ 0.21
HIF3A-202ENST00000244303 NPY5RQ15761 445 aa16.38■□□□□ 0.21
HIF3A-202ENST00000244303 TNFRSF25Q93038 417 aa16.38■□□□□ 0.21
HIF3A-202ENST00000244303 NSUN4Q96CB9 384 aaKnown RBP16.38■□□□□ 0.21
HIF3A-202ENST00000244303 PAGE5Q96GU1 130 aa16.38■□□□□ 0.21
HIF3A-202ENST00000244303 BRMS1Q9HCU9 246 aa16.38■□□□□ 0.21
HIF3A-202ENST00000244303 NHSQ6T4R5 1651 aa16.38■□□□□ 0.21
HIF3A-202ENST00000244303 STX10O60499 249 aa16.38■□□□□ 0.21
HIF3A-202ENST00000244303 DDAH1O94760 285 aa16.38■□□□□ 0.21
HIF3A-202ENST00000244303 NR1I3Q14994 352 aa16.38■□□□□ 0.21
HIF3A-202ENST00000244303 SH3RF1Q7Z6J0 888 aa16.38■□□□□ 0.21
HIF3A-202ENST00000244303 FERMT2Q96AC1 680 aa16.38■□□□□ 0.21
HIF3A-202ENST00000244303 CCDC34Q96HJ3 373 aa16.38■□□□□ 0.21
HIF3A-202ENST00000244303 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.38■□□□□ 0.21
HIF3A-202ENST00000244303 KIAA1551Q9HCM1 1747 aa16.37■□□□□ 0.21
HIF3A-202ENST00000244303 CD44P16070 742 aaKnown RBP16.37■□□□□ 0.21
HIF3A-202ENST00000244303 MECOMQ03112 1051 aa16.37■□□□□ 0.21
HIF3A-202ENST00000244303 TTC38Q5R3I4 469 aa16.37■□□□□ 0.21
HIF3A-202ENST00000244303 KLHL10Q6JEL2 608 aa16.37■□□□□ 0.21
HIF3A-202ENST00000244303 FAM177A1Q8N128 213 aaPredicted RBP16.37■□□□□ 0.21
HIF3A-202ENST00000244303 ANKRD2Q9GZV1 360 aa16.37■□□□□ 0.21
HIF3A-202ENST00000244303 COL24A1Q17RW2 1714 aa16.37■□□□□ 0.21
HIF3A-202ENST00000244303 A0A1B0GTH6 734 aa16.36■□□□□ 0.21
HIF3A-202ENST00000244303 SEMA3EO15041 775 aa16.36■□□□□ 0.21
HIF3A-202ENST00000244303 BMP15O95972 392 aa16.36■□□□□ 0.21
HIF3A-202ENST00000244303 TM4SF1P30408 202 aa16.36■□□□□ 0.21
HIF3A-202ENST00000244303 STX17P56962 302 aa16.36■□□□□ 0.21
HIF3A-202ENST00000244303 FAM47AQ5JRC9 791 aa16.36■□□□□ 0.21
HIF3A-202ENST00000244303 TOGARAM2Q6ZUX3 1019 aa16.36■□□□□ 0.21
HIF3A-202ENST00000244303 SRBD1Q8N5C6 995 aaKnown RBP16.36■□□□□ 0.21
HIF3A-202ENST00000244303 TFCP2L1Q9NZI6 479 aa16.36■□□□□ 0.21
HIF3A-202ENST00000244303 SYNRGQ9UMZ2 1314 aa16.36■□□□□ 0.21
HIF3A-202ENST00000244303 MAST2Q6P0Q8 1798 aa16.36■□□□□ 0.21
HIF3A-202ENST00000244303 URI1O94763 535 aaPredicted RBP16.36■□□□□ 0.21
HIF3A-202ENST00000244303 DPYDQ12882 1025 aa16.36■□□□□ 0.21
HIF3A-202ENST00000244303 PTGDRQ13258 359 aa16.36■□□□□ 0.21
HIF3A-202ENST00000244303 CUL4BQ13620 913 aa16.36■□□□□ 0.21
HIF3A-202ENST00000244303 CTCFLQ8NI51 663 aaPredicted RBP16.36■□□□□ 0.21
HIF3A-202ENST00000244303 GJD4Q96KN9 370 aaPredicted RBP16.36■□□□□ 0.21
HIF3A-202ENST00000244303 DCP1AQ9NPI6 582 aaPredicted RBP16.36■□□□□ 0.21
HIF3A-202ENST00000244303 PARP3Q9Y6F1 533 aa16.36■□□□□ 0.21
HIF3A-202ENST00000244303 ORC4O43929 436 aa16.35■□□□□ 0.21
HIF3A-202ENST00000244303 H2AFXP16104 143 aaPredicted RBP16.35■□□□□ 0.21
HIF3A-202ENST00000244303 HIBADHP31937 336 aaKnown RBP16.35■□□□□ 0.21
HIF3A-202ENST00000244303 APTXQ7Z2E3 356 aaKnown RBP16.35■□□□□ 0.21
HIF3A-202ENST00000244303 SMYD4Q8IYR2 804 aaPredicted RBP16.35■□□□□ 0.21
HIF3A-202ENST00000244303 ZNF446Q9NWS9 450 aa16.35■□□□□ 0.21
HIF3A-202ENST00000244303 TEX33O43247 280 aa16.35■□□□□ 0.21
HIF3A-202ENST00000244303 RFC4P35249 363 aa16.35■□□□□ 0.21
HIF3A-202ENST00000244303 ATP2C1P98194 919 aaPredicted RBP16.35■□□□□ 0.21
HIF3A-202ENST00000244303 TRAPPC3LQ5T215 181 aa16.35■□□□□ 0.21
HIF3A-202ENST00000244303 SPATA1Q5VX52 437 aa16.35■□□□□ 0.21
HIF3A-202ENST00000244303 STAMQ92783 540 aa16.35■□□□□ 0.21
HIF3A-202ENST00000244303 MYH8P13535 1937 aa16.35■□□□□ 0.21
HIF3A-202ENST00000244303 CYP2D6P10635 497 aa16.34■□□□□ 0.21
HIF3A-202ENST00000244303 PRDX5P30044 214 aa16.34■□□□□ 0.21
HIF3A-202ENST00000244303 ARHGAP29Q52LW3 1261 aa16.34■□□□□ 0.21
HIF3A-202ENST00000244303 CT47A1Q5JQC4 288 aaPredicted RBP16.34■□□□□ 0.21
HIF3A-202ENST00000244303 GSDMAQ96QA5 445 aa16.34■□□□□ 0.21
HIF3A-202ENST00000244303 CRNKL1Q9BZJ0 848 aaKnown RBP16.34■□□□□ 0.21
HIF3A-202ENST00000244303 GOLGA6L9A6NEM1 432 aa16.34■□□□□ 0.21
HIF3A-202ENST00000244303 PIK3AP1Q6ZUJ8 805 aa16.34■□□□□ 0.21
HIF3A-202ENST00000244303 KRT222Q8N1A0 295 aa16.34■□□□□ 0.21
HIF3A-202ENST00000244303 PDS5AQ29RF7 1337 aaKnown RBP16.34■□□□□ 0.21
HIF3A-202ENST00000244303 PPP1R3GB7ZBB8 358 aa16.33■□□□□ 0.2
HIF3A-202ENST00000244303 ADAMTS3O15072 1205 aa16.33■□□□□ 0.2
HIF3A-202ENST00000244303 SCG2P13521 617 aa16.33■□□□□ 0.2
HIF3A-202ENST00000244303 VEGFAP15692 232 aaPredicted RBP16.33■□□□□ 0.2
HIF3A-202ENST00000244303 NLRP5P59047 1200 aa16.33■□□□□ 0.2
HIF3A-202ENST00000244303 GNG11P61952 73 aa16.33■□□□□ 0.2
HIF3A-202ENST00000244303 MEX3CQ5U5Q3 659 aaKnown RBP16.33■□□□□ 0.2
HIF3A-202ENST00000244303 FAM196AQ6ZSG2 479 aa16.33■□□□□ 0.2
HIF3A-202ENST00000244303 MNS1Q8NEH6 495 aa16.33■□□□□ 0.2
HIF3A-202ENST00000244303 WDR24Q96S15 920 aa16.33■□□□□ 0.2
HIF3A-202ENST00000244303 DESI2Q9BSY9 194 aa16.33■□□□□ 0.2
HIF3A-202ENST00000244303 CARD6Q9BX69 1037 aa16.33■□□□□ 0.2
HIF3A-202ENST00000244303 SRRTQ9BXP5 876 aaKnown RBP16.33■□□□□ 0.2
HIF3A-202ENST00000244303 FAM53CQ9NYF3 392 aa16.33■□□□□ 0.2
HIF3A-202ENST00000244303 AKR1B15C9JRZ8 316 aaPredicted RBP16.33■□□□□ 0.2
HIF3A-202ENST00000244303 GABPB1Q06547 395 aaPredicted RBP16.33■□□□□ 0.2
HIF3A-202ENST00000244303 MTF1Q14872 753 aa16.33■□□□□ 0.2
HIF3A-202ENST00000244303 SLC4A8Q2Y0W8 1093 aa16.33■□□□□ 0.2
HIF3A-202ENST00000244303 CDKAL1Q5VV42 579 aa16.33■□□□□ 0.2
HIF3A-202ENST00000244303 UBXN4Q92575 508 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms