RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 PHKA1P46020 1223 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 KCNJ6P48051 423 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 DNM2P50570 870 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 GUCY2FP51841 1108 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 EXOSC10Q01780 885 aaKnown RBP12.3□□□□□ -0.44
CCDC170-201ENST00000239374 ANKRD13CQ8N6S4 541 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 TRIM58Q8NG06 486 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 JRKLQ9Y4A0 524 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 IL2RBP14784 551 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 CASP1P29466 404 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 PAK2Q13177 524 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 RRAGAQ7L523 313 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 L2HGDHQ9H9P8 463 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 JAG2Q9Y219 1238 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 GTPBP6O43824 516 aaPredicted RBP12.3□□□□□ -0.44
CCDC170-201ENST00000239374 MFAP3LO75121 409 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 ARHGAP25P42331 645 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 PPARAQ07869 468 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 SV2BQ7L1I2 683 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 DNAJC10Q8IXB1 793 aa12.3□□□□□ -0.44
CCDC170-201ENST00000239374 GOLGA6L10A0A0M3HER8 536 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 TEX33O43247 280 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 UBE3CQ15386 1083 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 CFAP221Q4G0U5 840 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 KCTD16Q68DU8 428 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 ARHGEF25Q86VW2 580 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 TAOK3Q9H2K8 898 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 ZSWIM5Q9P217 1185 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 NIP7Q9Y221 180 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCDC170-201ENST00000239374 A2ML1A8K2U0 1454 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 CTDNEP1O95476 244 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 BAG3O95817 575 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 RPN1P04843 607 aaKnown RBP12.29□□□□□ -0.44
CCDC170-201ENST00000239374 IFNAR1P17181 557 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 SDR42E1Q8WUS8 393 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 KCNB2Q92953 911 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 NEXMIFQ5QGS0 1516 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 PCDH11XQ9BZA7 1347 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 PCDH11YQ9BZA8 1340 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 PDE8AO60658 829 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 CIAO1O76071 339 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 MAP2K2P36507 400 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 SSR1P43307 286 aaKnown RBP12.29□□□□□ -0.44
CCDC170-201ENST00000239374 E2F4Q16254 413 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 CNNM4Q6P4Q7 775 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 ANKS4BQ8N8V4 417 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 CABS1Q96KC9 395 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 NLRC4Q9NPP4 1024 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 ADGRG1Q9Y653 693 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 SETD1BQ9UPS6 1966 aaKnown RBP12.29□□□□□ -0.44
CCDC170-201ENST00000239374 E7EVH7 732 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 ZNF609O15014 1411 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 TRIM66O15016 1216 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 PLA2G4AP47712 749 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 CCDC155Q8N6L0 562 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 SAMM50Q9Y512 469 aa12.29□□□□□ -0.44
CCDC170-201ENST00000239374 CTDP1Q9Y5B0 961 aaPredicted RBP12.29□□□□□ -0.44
CCDC170-201ENST00000239374 SHPRHQ149N8 1683 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 ZPR1O75312 459 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 SF3A3Q12874 501 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCDC170-201ENST00000239374 GIGYF2Q6Y7W6 1299 aaKnown RBP12.28□□□□□ -0.44
CCDC170-201ENST00000239374 PPANQ9NQ55 473 aaKnown RBP12.28□□□□□ -0.44
CCDC170-201ENST00000239374 SRPRBQ9Y5M8 271 aaKnown RBP12.28□□□□□ -0.44
CCDC170-201ENST00000239374 PARP3Q9Y6F1 533 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 EXOC5O00471 708 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 H2AFXP16104 143 aaPredicted RBP12.28□□□□□ -0.44
CCDC170-201ENST00000239374 PTPREP23469 700 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 ADD2P35612 726 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 EFCAB13Q8IY85 973 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 CTNNBL1Q8WYA6 563 aaPredicted RBP12.28□□□□□ -0.44
CCDC170-201ENST00000239374 EFCC1Q9HA90 598 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 NDUFA10O95299 355 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 PRR29P0C7W0 189 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 CDC25AP30304 524 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 PPP1R2P41236 205 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 DYMQ7RTS9 669 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 ZSCAN29Q8IWY8 852 aaPredicted RBP12.28□□□□□ -0.44
CCDC170-201ENST00000239374 FHOD1Q9Y613 1164 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 KRT13P13646 458 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 TNNI2P48788 182 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 SLC9C1Q4G0N8 1177 aa12.28□□□□□ -0.44
CCDC170-201ENST00000239374 METTL16Q86W50 562 aaKnown RBP12.28□□□□□ -0.44
CCDC170-201ENST00000239374 MB21D2Q8IYB1 491 aaPredicted RBP12.28□□□□□ -0.44
CCDC170-201ENST00000239374 GOLGA8KD6RF30 607 aa12.27□□□□□ -0.44
CCDC170-201ENST00000239374 PPFIA4O75335 1185 aa12.27□□□□□ -0.44
CCDC170-201ENST00000239374 PARP1P09874 1014 aaKnown RBP12.27□□□□□ -0.44
CCDC170-201ENST00000239374 GNA11P29992 359 aa12.27□□□□□ -0.44
CCDC170-201ENST00000239374 TXKP42681 527 aa12.27□□□□□ -0.44
CCDC170-201ENST00000239374 HYOU1Q9Y4L1 999 aa12.27□□□□□ -0.44
CCDC170-201ENST00000239374 NRKQ7Z2Y5 1582 aa12.27□□□□□ -0.44
CCDC170-201ENST00000239374 A0A087WUV0 522 aaPredicted RBP12.27□□□□□ -0.44
CCDC170-201ENST00000239374 B4DLN1 442 aa12.27□□□□□ -0.44
CCDC170-201ENST00000239374 EIF3CLB5ME19 914 aaKnown RBP12.27□□□□□ -0.44
CCDC170-201ENST00000239374 CCNT1O60563 726 aaKnown RBP12.27□□□□□ -0.44
CCDC170-201ENST00000239374 MAP3K9P80192 1104 aa12.27□□□□□ -0.44
CCDC170-201ENST00000239374 KRT31Q15323 416 aa12.27□□□□□ -0.44
CCDC170-201ENST00000239374 FAM47AQ5JRC9 791 aa12.27□□□□□ -0.44
CCDC170-201ENST00000239374 CCDC84Q86UT8 332 aaPredicted RBP12.27□□□□□ -0.44
CCDC170-201ENST00000239374 EIF3CQ99613 913 aaKnown RBP12.27□□□□□ -0.44
CCDC170-201ENST00000239374 GREM2Q9H772 168 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms