RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ARHGAP25P42331 645 aa14.82□□□□□ -0.04
NEK4-201ENST00000233027 ZNF654Q8IZM8 581 aa14.82□□□□□ -0.04
NEK4-201ENST00000233027 CCDC110Q8TBZ0 833 aa14.82□□□□□ -0.04
NEK4-201ENST00000233027 CLEC11AQ9Y240 323 aa14.82□□□□□ -0.04
NEK4-201ENST00000233027 ABCB4P21439 1286 aa14.82□□□□□ -0.04
NEK4-201ENST00000233027 KSR1Q8IVT5 923 aa14.82□□□□□ -0.04
NEK4-201ENST00000233027 TSKSQ9UJT2 592 aa14.82□□□□□ -0.04
NEK4-201ENST00000233027 EXOC7Q9UPT5 735 aa14.82□□□□□ -0.04
NEK4-201ENST00000233027 KRT15P19012 456 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 TECP42680 631 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 RNF34Q969K3 372 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 PCDHA7Q9UN72 937 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 B4DLN1 442 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 TTC19Q6DKK2 380 aaPredicted RBP14.81□□□□□ -0.04
NEK4-201ENST00000233027 CEP128Q6ZU80 1094 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 GGA1Q9UJY5 639 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 KDM5AP29375 1690 aaKnown RBP14.81□□□□□ -0.04
NEK4-201ENST00000233027 KCNK3O14649 394 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 CTNNA1P35221 906 aaKnown RBP14.81□□□□□ -0.04
NEK4-201ENST00000233027 PARP10Q53GL7 1025 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 ARHGEF10LQ9HCE6 1279 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 PCDHB13Q9Y5F0 798 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 GAS8O95995 478 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 ADD1P35611 737 aaKnown RBP14.81□□□□□ -0.04
NEK4-201ENST00000233027 SLC1A4P43007 532 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 PSMD6Q15008 389 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 WHAMMP3Q1A5X7 153 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 NOSTRINQ8IVI9 506 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 PLCB1Q9NQ66 1216 aa14.81□□□□□ -0.04
NEK4-201ENST00000233027 DAPK3O43293 454 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 MTMR3Q13615 1198 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 ZNF274Q96GC6 653 aaPredicted RBP14.8□□□□□ -0.04
NEK4-201ENST00000233027 USP44Q9H0E7 712 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 VPS37BQ9H9H4 285 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 KIF24Q5T7B8 1368 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 SMCO2A6NFE2 343 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 PFKFB2O60825 505 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 BRD3Q15059 726 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 CCDC62Q6P9F0 684 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 DCUN1D2Q6PH85 259 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 BAIAP2L1Q9UHR4 511 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 FRMPD2Q68DX3 1309 aaPredicted RBP14.8□□□□□ -0.04
NEK4-201ENST00000233027 MROH5Q6ZUA9 1318 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 RPUSD2Q8IZ73 545 aaKnown RBP14.8□□□□□ -0.04
NEK4-201ENST00000233027 EAF2Q96CJ1 260 aaPredicted RBP14.8□□□□□ -0.04
NEK4-201ENST00000233027 ABCC10Q5T3U5 1492 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 SCRN1Q12765 414 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 ADAT2Q7Z6V5 191 aaKnown RBP14.8□□□□□ -0.04
NEK4-201ENST00000233027 ADCY9O60503 1353 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 SSH2Q76I76 1423 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 ZMYM6O95789 1325 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 CD2BP2O95400 341 aaKnown RBP14.8□□□□□ -0.04
NEK4-201ENST00000233027 CFBP00751 764 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 BCRP11274 1271 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 TPH2Q8IWU9 490 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 SDR42E1Q8WUS8 393 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 ZNF496Q96IT1 587 aaPredicted RBP14.8□□□□□ -0.04
NEK4-201ENST00000233027 C19orf44Q9H6X5 657 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 RGS12O14924 1447 aa14.8□□□□□ -0.04
NEK4-201ENST00000233027 CCT6BQ92526 530 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 TACO1Q9BSH4 297 aaKnown RBP14.79□□□□□ -0.04
NEK4-201ENST00000233027 CAPN7Q9Y6W3 813 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 SEC31AO94979 1220 aaKnown RBP14.79□□□□□ -0.04
NEK4-201ENST00000233027 SDCCAG8Q86SQ7 713 aaPredicted RBP14.79□□□□□ -0.04
NEK4-201ENST00000233027 SH2D4AQ9H788 454 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 A0A087WWV3 80 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 HSPD1P10809 573 aaKnown RBP14.79□□□□□ -0.04
NEK4-201ENST00000233027 PPP2R5CQ13362 524 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 FEZ2Q9UHY8 353 aaPredicted RBP14.79□□□□□ -0.04
NEK4-201ENST00000233027 CYP2J2P51589 502 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 ADCK5Q3MIX3 580 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 DNAJC10Q8IXB1 793 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 OR8K1Q8NGG5 319 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 MKRN1Q9UHC7 482 aaKnown RBP14.79□□□□□ -0.04
NEK4-201ENST00000233027 AMFRQ9UKV5 643 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 ARHGEF10O15013 1369 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 A6NNZ2 444 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 KRT19P08727 400 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 TUBB8Q3ZCM7 444 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 CPXCR1Q8N123 301 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 REXO1Q8N1G1 1221 aaKnown RBP14.79□□□□□ -0.04
NEK4-201ENST00000233027 DDX17Q92841 729 aaKnown RBP14.79□□□□□ -0.04
NEK4-201ENST00000233027 GPKOWQ92917 476 aaPredicted RBP eCLIP14.79□□□□□ -0.04
NEK4-201ENST00000233027 CCDC51Q96ER9 411 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 PPP1R13BQ96KQ4 1090 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 ORAI2Q96SN7 254 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 ZSCAN10Q96SZ4 725 aaPredicted RBP14.79□□□□□ -0.04
NEK4-201ENST00000233027 DPH5Q9H2P9 285 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 FAM184BQ9ULE4 1060 aa14.79□□□□□ -0.04
NEK4-201ENST00000233027 PTPRTO14522 1441 aa14.78□□□□□ -0.04
NEK4-201ENST00000233027 CASC4Q6P4E1 433 aa14.78□□□□□ -0.04
NEK4-201ENST00000233027 JDP2Q8WYK2 163 aa14.78□□□□□ -0.04
NEK4-201ENST00000233027 GINS2Q9Y248 185 aa14.78□□□□□ -0.04
NEK4-201ENST00000233027 TXNDC9O14530 226 aa14.78□□□□□ -0.04
NEK4-201ENST00000233027 GMNNO75496 209 aa14.78□□□□□ -0.04
NEK4-201ENST00000233027 GPBP1Q86WP2 473 aa14.78□□□□□ -0.04
NEK4-201ENST00000233027 WDR66Q8TBY9 1149 aa14.78□□□□□ -0.04
NEK4-201ENST00000233027 SSH3Q8TE77 659 aa14.78□□□□□ -0.04
NEK4-201ENST00000233027 GJA3Q9Y6H8 435 aa14.78□□□□□ -0.04
NEK4-201ENST00000233027 CCDC84Q86UT8 332 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms