RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 NUCKS1Q9H1E3 243 aaKnown RBP12.78□□□□□ -0.36
LAMA4-201ENST00000230538 CASQ2O14958 399 aaPredicted RBP12.78□□□□□ -0.36
LAMA4-201ENST00000230538 NSMFQ6X4W1 530 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 LARGE2Q8N3Y3 721 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 CARD10Q9BWT7 1032 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 GNA14O95837 355 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 ME3Q16798 604 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 FAM47AQ5JRC9 791 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 LSM14BQ9BX40 385 aaKnown RBP12.78□□□□□ -0.36
LAMA4-201ENST00000230538 AFG3L2Q9Y4W6 797 aa12.78□□□□□ -0.36
LAMA4-201ENST00000230538 PZPP20742 1482 aa12.77□□□□□ -0.36
LAMA4-201ENST00000230538 TFAP4Q01664 338 aa12.77□□□□□ -0.36
LAMA4-201ENST00000230538 DENND2CQ68D51 928 aa12.77□□□□□ -0.36
LAMA4-201ENST00000230538 TPH2Q8IWU9 490 aa12.77□□□□□ -0.36
LAMA4-201ENST00000230538 ARHGAP24Q8N264 748 aa12.77□□□□□ -0.36
LAMA4-201ENST00000230538 NUF2Q9BZD4 464 aa12.77□□□□□ -0.36
LAMA4-201ENST00000230538 UHRF1BP1Q6BDS2 1440 aa12.77□□□□□ -0.36
LAMA4-201ENST00000230538 M0QZ92 97 aa12.77□□□□□ -0.36
LAMA4-201ENST00000230538 CCDC84Q86UT8 332 aaPredicted RBP12.77□□□□□ -0.36
LAMA4-201ENST00000230538 REXO1Q8N1G1 1221 aaKnown RBP12.77□□□□□ -0.36
LAMA4-201ENST00000230538 IFIH1Q9BYX4 1025 aaKnown RBP12.77□□□□□ -0.36
LAMA4-201ENST00000230538 KCNA6P17658 529 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 ADKP55263 362 aaKnown RBP12.77□□□□□ -0.37
LAMA4-201ENST00000230538 GCKRQ14397 625 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 LONRF2Q1L5Z9 754 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 SUPT20HQ8NEM7 779 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 NT5C3AQ9H0P0 336 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 FAM207AQ9NSI2 230 aaPredicted RBP12.77□□□□□ -0.37
LAMA4-201ENST00000230538 TTLL3Q9Y4R7 772 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 SHANK2Q9UPX8 1470 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 KDM3AQ9Y4C1 1321 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 BLMP54132 1417 aaPredicted RBP12.77□□□□□ -0.37
LAMA4-201ENST00000230538 TNNI1P19237 187 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 LRMPQ12912 555 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 MIPOL1Q8TD10 442 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 DSCC1Q9BVC3 393 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 VPS37BQ9H9H4 285 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 SERTAD1Q9UHV2 236 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 OAS2P29728 719 aaKnown RBP12.77□□□□□ -0.37
LAMA4-201ENST00000230538 SARNPP82979 210 aaKnown RBP12.77□□□□□ -0.37
LAMA4-201ENST00000230538 SF3A3Q12874 501 aaKnown RBP eCLIP12.77□□□□□ -0.37
LAMA4-201ENST00000230538 PRKG1Q13976 671 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 PARP2Q9UGN5 583 aa12.77□□□□□ -0.37
LAMA4-201ENST00000230538 FEZ2Q9UHY8 353 aaPredicted RBP12.77□□□□□ -0.37
LAMA4-201ENST00000230538 P4HA1P13674 534 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 SATB1Q01826 763 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 PPARAQ07869 468 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 CEP120Q8N960 986 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 RAB17Q9H0T7 212 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 UNC13AQ9UPW8 1703 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 YWHAEP62258 255 aaKnown RBP12.76□□□□□ -0.37
LAMA4-201ENST00000230538 SND1Q7KZF4 910 aaKnown RBP eCLIP12.76□□□□□ -0.37
LAMA4-201ENST00000230538 OTUD6AQ7L8S5 288 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 IQCDQ96DY2 449 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 RIOK1Q9BRS2 568 aaKnown RBP12.76□□□□□ -0.37
LAMA4-201ENST00000230538 SMCO2A6NFE2 343 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 CHL1O00533 1208 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 MAN1A1P33908 653 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 CMTR1Q8N1G2 835 aaKnown RBP12.76□□□□□ -0.37
LAMA4-201ENST00000230538 RDH13Q8NBN7 331 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 PPP1R12CQ9BZL4 782 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 ARPP21Q9UBL0 812 aaPredicted RBP12.76□□□□□ -0.37
LAMA4-201ENST00000230538 AMFRQ9UKV5 643 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 LMTK3Q96Q04 1460 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 CUL4BQ13620 913 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 TSNAXIP1Q2TAA8 658 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 VCXQ9H320 206 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 NLRC4Q9NPP4 1024 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 TMEM63CQ9P1W3 806 aa12.76□□□□□ -0.37
LAMA4-201ENST00000230538 C2CD5Q86YS7 1000 aa12.75□□□□□ -0.37
LAMA4-201ENST00000230538 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
LAMA4-201ENST00000230538 GSDMBQ8TAX9 411 aa12.75□□□□□ -0.37
LAMA4-201ENST00000230538 CABS1Q96KC9 395 aa12.75□□□□□ -0.37
LAMA4-201ENST00000230538 A0A1B0GUA9 196 aa12.75□□□□□ -0.37
LAMA4-201ENST00000230538 U2AF1L4Q8WU68 220 aaKnown RBP12.75□□□□□ -0.37
LAMA4-201ENST00000230538 XPO4Q9C0E2 1151 aaKnown RBP12.75□□□□□ -0.37
LAMA4-201ENST00000230538 ARHGAP25P42331 645 aa12.75□□□□□ -0.37
LAMA4-201ENST00000230538 PPFIA1Q13136 1202 aa12.75□□□□□ -0.37
LAMA4-201ENST00000230538 GAS7O60861 476 aa12.75□□□□□ -0.37
LAMA4-201ENST00000230538 SLC12A2P55011 1212 aa12.75□□□□□ -0.37
LAMA4-201ENST00000230538 PCDHB13Q9Y5F0 798 aa12.75□□□□□ -0.37
LAMA4-201ENST00000230538 PEG3Q9GZU2 1588 aa12.75□□□□□ -0.37
LAMA4-201ENST00000230538 GSPT1P15170 499 aaKnown RBP12.75□□□□□ -0.37
LAMA4-201ENST00000230538 FAM102BQ5T8I3 360 aa12.75□□□□□ -0.37
LAMA4-201ENST00000230538 MIER3Q7Z3K6 550 aa12.75□□□□□ -0.37
LAMA4-201ENST00000230538 MGARPQ8TDB4 240 aa12.75□□□□□ -0.37
LAMA4-201ENST00000230538 RSAD2Q8WXG1 361 aa12.75□□□□□ -0.37
LAMA4-201ENST00000230538 NLRX1Q86UT6 975 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 NR1I2O75469 434 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 GPBP1Q86WP2 473 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 DEPTORQ8TB45 409 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 KCNJ18B7U540 433 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 CYP2J2P51589 502 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 MAP7Q14244 749 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 KCNJ12Q14500 433 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 KMT5BQ4FZB7 885 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 TBC1D22AQ8WUA7 517 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 ATP2A3Q93084 1043 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 EDC3Q96F86 508 aaKnown RBP12.74□□□□□ -0.37
LAMA4-201ENST00000230538 RILPQ96NA2 401 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms