RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 HIP1O00291 1037 aa16.33■□□□□ 0.2
VEGFA-201ENST00000230480 BMP2KLQ5H9B9 411 aa16.33■□□□□ 0.2
VEGFA-201ENST00000230480 RCSD1Q6JBY9 416 aa16.33■□□□□ 0.2
VEGFA-201ENST00000230480 RASGRP2Q7LDG7 609 aa16.33■□□□□ 0.2
VEGFA-201ENST00000230480 AMOTL1Q8IY63 956 aa16.33■□□□□ 0.2
VEGFA-201ENST00000230480 SPICE1Q8N0Z3 855 aa16.33■□□□□ 0.2
VEGFA-201ENST00000230480 RPAP3Q9H6T3 665 aaPredicted RBP16.33■□□□□ 0.2
VEGFA-201ENST00000230480 BTBD7Q9P203 1132 aa16.33■□□□□ 0.2
VEGFA-201ENST00000230480 GABRQQ9UN88 632 aa16.33■□□□□ 0.2
VEGFA-201ENST00000230480 HPS5Q9UPZ3 1129 aa16.33■□□□□ 0.2
VEGFA-201ENST00000230480 SPDYE16A6NNV3 312 aaPredicted RBP16.32■□□□□ 0.2
VEGFA-201ENST00000230480 USP17L15C9J2P7 530 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 USP17L13C9JLJ4 530 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 USP17L11C9JVI0 530 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 USP17L18D6R9N7 530 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 USP17L22D6RA61 530 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 USP17L17D6RBQ6 530 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 USP17L19D6RCP7 530 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 USP17L20D6RJB6 530 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 OSBPP22059 807 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 PSMC4P43686 418 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 NEDD4P46934 1319 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 USP14P54578 494 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 USP17L24Q0WX57 530 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 FAM110CQ1W6H9 321 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 FBXO46Q6PJ61 603 aaPredicted RBP16.32■□□□□ 0.2
VEGFA-201ENST00000230480 LBX2Q6XYB7 198 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 ZNF444Q8N0Y2 327 aaPredicted RBP16.32■□□□□ 0.2
VEGFA-201ENST00000230480 STAG1Q8WVM7 1258 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 FEZ1Q99689 392 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 EFCC1Q9HA90 598 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 FBXO28Q9NVF7 368 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 GJD2Q9UKL4 321 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 ADAMTS5Q9UNA0 930 aa16.32■□□□□ 0.2
VEGFA-201ENST00000230480 AKNAD1Q5T1N1 836 aa16.31■□□□□ 0.2
VEGFA-201ENST00000230480 NUP88Q99567 741 aaPredicted RBP16.31■□□□□ 0.2
VEGFA-201ENST00000230480 LSG1Q9H089 658 aaKnown RBP16.31■□□□□ 0.2
VEGFA-201ENST00000230480 PORCNQ9H237 461 aa16.31■□□□□ 0.2
VEGFA-201ENST00000230480 PPP4R2Q9NY27 417 aa16.31■□□□□ 0.2
VEGFA-201ENST00000230480 CLIP2Q9UDT6 1046 aa16.31■□□□□ 0.2
VEGFA-201ENST00000230480 PTCH2Q9Y6C5 1203 aa16.31■□□□□ 0.2
VEGFA-201ENST00000230480 RAD50Q92878 1312 aa16.3■□□□□ 0.2
VEGFA-201ENST00000230480 ZNFX1Q9P2E3 1918 aaKnown RBP16.3■□□□□ 0.2
VEGFA-201ENST00000230480 F5H6K3 240 aa16.3■□□□□ 0.2
VEGFA-201ENST00000230480 NDUFB10O96000 172 aa16.3■□□□□ 0.2
VEGFA-201ENST00000230480 GCLCP48506 637 aaPredicted RBP16.3■□□□□ 0.2
VEGFA-201ENST00000230480 PDE4BQ07343 736 aa16.3■□□□□ 0.2
VEGFA-201ENST00000230480 KLRC3Q07444 240 aa16.3■□□□□ 0.2
VEGFA-201ENST00000230480 ERICH6BQ5W0A0 696 aa16.3■□□□□ 0.2
VEGFA-201ENST00000230480 STOX1Q6ZVD7 989 aa16.3■□□□□ 0.2
VEGFA-201ENST00000230480 REPS2Q8NFH8 660 aa16.3■□□□□ 0.2
VEGFA-201ENST00000230480 MAP4K1Q92918 833 aa16.3■□□□□ 0.2
VEGFA-201ENST00000230480 PNMA3Q9UL41 463 aa16.3■□□□□ 0.2
VEGFA-201ENST00000230480 CCDC85CA6NKD9 419 aa16.29■□□□□ 0.2
VEGFA-201ENST00000230480 CYP21A2P08686 494 aa16.29■□□□□ 0.2
VEGFA-201ENST00000230480 DSG3P32926 999 aa16.29■□□□□ 0.2
VEGFA-201ENST00000230480 PABPC4Q13310 644 aaKnown RBP eCLIP16.29■□□□□ 0.26e-13■■■■■ 112.3
VEGFA-201ENST00000230480 PKN2Q16513 984 aaKnown RBP16.29■□□□□ 0.2
VEGFA-201ENST00000230480 LRRC47Q8N1G4 583 aaKnown RBP16.29■□□□□ 0.2
VEGFA-201ENST00000230480 SMCR8Q8TEV9 937 aaPredicted RBP16.29■□□□□ 0.2
VEGFA-201ENST00000230480 ESYT1Q9BSJ8 1104 aa16.29■□□□□ 0.2
VEGFA-201ENST00000230480 ARHGEF10LQ9HCE6 1279 aa16.29■□□□□ 0.2
VEGFA-201ENST00000230480 SRRDQ9UH36 339 aa16.29■□□□□ 0.2
VEGFA-201ENST00000230480 IRX3P78415 501 aaPredicted RBP16.28■□□□□ 0.2
VEGFA-201ENST00000230480 ATP2B2Q01814 1243 aa16.28■□□□□ 0.2
VEGFA-201ENST00000230480 PRKCZQ05513 592 aa16.28■□□□□ 0.2
VEGFA-201ENST00000230480 COG2Q14746 738 aa16.28■□□□□ 0.2
VEGFA-201ENST00000230480 FAM83BQ5T0W9 1011 aa16.28■□□□□ 0.2
VEGFA-201ENST00000230480 LPAR1Q92633 364 aa16.28■□□□□ 0.2
VEGFA-201ENST00000230480 USP6NLQ92738 828 aa16.28■□□□□ 0.2
VEGFA-201ENST00000230480 ATG4CQ96DT6 458 aa16.28■□□□□ 0.2
VEGFA-201ENST00000230480 TCP11L1Q9NUJ3 509 aa16.28■□□□□ 0.2
VEGFA-201ENST00000230480 WDR46O15213 610 aaKnown RBP16.27■□□□□ 0.2
VEGFA-201ENST00000230480 RANBP6O60518 1105 aaKnown RBP16.27■□□□□ 0.2
VEGFA-201ENST00000230480 TTLL1O95922 423 aa16.27■□□□□ 0.2
VEGFA-201ENST00000230480 TSPY3P0CV98 308 aa16.27■□□□□ 0.2
VEGFA-201ENST00000230480 TSPY8P0CW00 308 aa16.27■□□□□ 0.2
VEGFA-201ENST00000230480 MFAP1P55081 439 aaKnown RBP16.27■□□□□ 0.2
VEGFA-201ENST00000230480 ERVK-9P63128 1117 aa16.27■□□□□ 0.2
VEGFA-201ENST00000230480 ERVK-24P63145 666 aa16.27■□□□□ 0.2
VEGFA-201ENST00000230480 GMCL1P1Q8NEA9 526 aa16.27■□□□□ 0.2
VEGFA-201ENST00000230480 RABGAP1Q9Y3P9 1069 aa16.27■□□□□ 0.2
VEGFA-201ENST00000230480 ZNF213O14771 459 aa16.26■□□□□ 0.19
VEGFA-201ENST00000230480 IGHA2P01877 340 aa16.26■□□□□ 0.19
VEGFA-201ENST00000230480 SLC3A2P08195 630 aaKnown RBP16.26■□□□□ 0.19
VEGFA-201ENST00000230480 CYB5R4Q7L1T6 521 aa16.26■□□□□ 0.19
VEGFA-201ENST00000230480 GPRC5AQ8NFJ5 357 aa16.26■□□□□ 0.19
VEGFA-201ENST00000230480 ARMC5Q96C12 935 aa16.26■□□□□ 0.19
VEGFA-201ENST00000230480 TMEM47Q9BQJ4 181 aa16.26■□□□□ 0.19
VEGFA-201ENST00000230480 ZNF287Q9HBT7 754 aa16.26■□□□□ 0.19
VEGFA-201ENST00000230480 ZSWIM5Q9P217 1185 aa16.26■□□□□ 0.19
VEGFA-201ENST00000230480 TSPY2A6NKD2 308 aa16.25■□□□□ 0.19
VEGFA-201ENST00000230480 B4E1Z4 1266 aa16.25■□□□□ 0.19
VEGFA-201ENST00000230480 FMNL1O95466 1100 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-201ENST00000230480 GNRH1P01148 92 aa16.25■□□□□ 0.19
VEGFA-201ENST00000230480 NEFLP07196 543 aa16.25■□□□□ 0.19
VEGFA-201ENST00000230480 FLT3LGP49771 235 aa16.25■□□□□ 0.19
VEGFA-201ENST00000230480 TMEM132BQ14DG7 1078 aa16.25■□□□□ 0.19
VEGFA-201ENST00000230480 RRP12Q5JTH9 1297 aaKnown RBP16.25■□□□□ 0.19
VEGFA-201ENST00000230480 MFSD6Q6ZSS7 791 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms