RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 FERMT2Q96AC1 680 aa15.36■□□□□ 0.05
NFKB1-201ENST00000226574 ABCB6Q9NP58 842 aa15.36■□□□□ 0.05
NFKB1-201ENST00000226574 B4DLN1 442 aa15.36■□□□□ 0.05
NFKB1-201ENST00000226574 CEP104O60308 925 aa15.36■□□□□ 0.05
NFKB1-201ENST00000226574 PRR29P0C7W0 189 aa15.36■□□□□ 0.05
NFKB1-201ENST00000226574 HERC4Q5GLZ8 1057 aaPredicted RBP15.36■□□□□ 0.05
NFKB1-201ENST00000226574 ADAT2Q7Z6V5 191 aaKnown RBP15.36■□□□□ 0.05
NFKB1-201ENST00000226574 NGLY1Q96IV0 654 aa15.36■□□□□ 0.05
NFKB1-201ENST00000226574 COPB1P53618 953 aaKnown RBP15.35■□□□□ 0.05
NFKB1-201ENST00000226574 ZNF622Q969S3 477 aaKnown RBP eCLIP15.35■□□□□ 0.05
NFKB1-201ENST00000226574 BIN2Q9UBW5 565 aaPredicted RBP15.35■□□□□ 0.05
NFKB1-201ENST00000226574 LRWD1Q9UFC0 647 aa15.35■□□□□ 0.05
NFKB1-201ENST00000226574 UBE2Q2LH0YL09 131 aa15.35■□□□□ 0.05
NFKB1-201ENST00000226574 ADD2P35612 726 aa15.35■□□□□ 0.05
NFKB1-201ENST00000226574 CCT5P48643 541 aa15.35■□□□□ 0.05
NFKB1-201ENST00000226574 PPANQ9NQ55 473 aaKnown RBP15.35■□□□□ 0.05
NFKB1-201ENST00000226574 RBM28Q9NW13 759 aaKnown RBP15.35■□□□□ 0.05
NFKB1-201ENST00000226574 PKD2L1Q9P0L9 805 aa15.35■□□□□ 0.05
NFKB1-201ENST00000226574 ADAM21Q9UKJ8 722 aa15.35■□□□□ 0.05
NFKB1-201ENST00000226574 ERBB3P21860 1342 aa15.35■□□□□ 0.05
NFKB1-201ENST00000226574 GNA11P29992 359 aa15.35■□□□□ 0.05
NFKB1-201ENST00000226574 HIBADHP31937 336 aaKnown RBP15.35■□□□□ 0.05
NFKB1-201ENST00000226574 USP49Q70CQ1 688 aa15.35■□□□□ 0.05
NFKB1-201ENST00000226574 CABP7Q86V35 215 aa15.35■□□□□ 0.05
NFKB1-201ENST00000226574 RFC4P35249 363 aa15.34■□□□□ 0.05
NFKB1-201ENST00000226574 LLGL1Q15334 1064 aa15.34■□□□□ 0.05
NFKB1-201ENST00000226574 SHC4Q6S5L8 630 aa15.34■□□□□ 0.05
NFKB1-201ENST00000226574 SNX29Q8TEQ0 813 aa15.34■□□□□ 0.05
NFKB1-201ENST00000226574 TGFBRAP1Q8WUH2 860 aa15.34■□□□□ 0.05
NFKB1-201ENST00000226574 SH2B2O14492 632 aaPredicted RBP15.34■□□□□ 0.05
NFKB1-201ENST00000226574 PPP6R2O75170 966 aa15.34■□□□□ 0.05
NFKB1-201ENST00000226574 INPP5BP32019 993 aa15.34■□□□□ 0.05
NFKB1-201ENST00000226574 ZSCAN10Q96SZ4 725 aaPredicted RBP15.34■□□□□ 0.05
NFKB1-201ENST00000226574 POLD4Q9HCU8 107 aa15.34■□□□□ 0.05
NFKB1-201ENST00000226574 GDAQ9Y2T3 454 aa15.34■□□□□ 0.05
NFKB1-201ENST00000226574 CCDC121Q6ZUS5 278 aa15.34■□□□□ 0.05
NFKB1-201ENST00000226574 MAEAQ7L5Y9 396 aa15.34■□□□□ 0.05
NFKB1-201ENST00000226574 UHMK1Q8TAS1 419 aaKnown RBP15.34■□□□□ 0.05
NFKB1-201ENST00000226574 TUBBP07437 444 aa15.33■□□□□ 0.05
NFKB1-201ENST00000226574 GUCY1A2P33402 732 aa15.33■□□□□ 0.05
NFKB1-201ENST00000226574 GNGT1P63211 74 aa15.33■□□□□ 0.05
NFKB1-201ENST00000226574 FCHSD1Q86WN1 690 aa15.33■□□□□ 0.05
NFKB1-201ENST00000226574 SELENOOQ9BVL4 669 aa15.33■□□□□ 0.05
NFKB1-201ENST00000226574 MLH3Q9UHC1 1453 aa15.33■□□□□ 0.05
NFKB1-201ENST00000226574 RPN1P04843 607 aaKnown RBP15.33■□□□□ 0.04
NFKB1-201ENST00000226574 PARP1P09874 1014 aaKnown RBP15.33■□□□□ 0.04
NFKB1-201ENST00000226574 SLC7A5Q01650 507 aa15.33■□□□□ 0.04
NFKB1-201ENST00000226574 GSPT2Q8IYD1 628 aaKnown RBP15.33■□□□□ 0.04
NFKB1-201ENST00000226574 SMARCC2Q8TAQ2 1214 aa15.33■□□□□ 0.04
NFKB1-201ENST00000226574 SENP2Q9HC62 589 aa15.33■□□□□ 0.04
NFKB1-201ENST00000226574 ZBTB21Q9ULJ3 1066 aa15.33■□□□□ 0.04
NFKB1-201ENST00000226574 SOS2Q07890 1332 aaPredicted RBP15.33■□□□□ 0.04
NFKB1-201ENST00000226574 CROCC2H7BZ55 1655 aa15.33■□□□□ 0.04
NFKB1-201ENST00000226574 MMP1P03956 469 aa15.33■□□□□ 0.04
NFKB1-201ENST00000226574 PCCAP05165 728 aaPredicted RBP15.33■□□□□ 0.04
NFKB1-201ENST00000226574 TEX11Q8IYF3 940 aa15.33■□□□□ 0.04
NFKB1-201ENST00000226574 CPVLQ9H3G5 476 aa15.33■□□□□ 0.04
NFKB1-201ENST00000226574 SPHKAPQ2M3C7 1700 aa15.33■□□□□ 0.04
NFKB1-201ENST00000226574 CTDNEP1O95476 244 aa15.33■□□□□ 0.04
NFKB1-201ENST00000226574 HLFQ16534 295 aa15.33■□□□□ 0.04
NFKB1-201ENST00000226574 LRRC41Q15345 812 aa15.32■□□□□ 0.04
NFKB1-201ENST00000226574 UBE3CQ15386 1083 aa15.32■□□□□ 0.04
NFKB1-201ENST00000226574 E2F4Q16254 413 aa15.32■□□□□ 0.04
NFKB1-201ENST00000226574 RDH13Q8NBN7 331 aa15.32■□□□□ 0.04
NFKB1-201ENST00000226574 CHMP2AO43633 222 aa15.32■□□□□ 0.04
NFKB1-201ENST00000226574 PLEKHA8P1O95397 391 aa15.32■□□□□ 0.04
NFKB1-201ENST00000226574 PNMA1Q8ND90 353 aa15.32■□□□□ 0.04
NFKB1-201ENST00000226574 ENOX1Q8TC92 643 aaKnown RBP15.32■□□□□ 0.04
NFKB1-201ENST00000226574 ZCCHC11Q5TAX3 1644 aaKnown RBP15.32■□□□□ 0.04
NFKB1-201ENST00000226574 PHLPP2Q6ZVD8 1323 aa15.32■□□□□ 0.04
NFKB1-201ENST00000226574 GBP2P32456 591 aaPredicted RBP15.32■□□□□ 0.04
NFKB1-201ENST00000226574 RASGRF1Q13972 1273 aa15.32■□□□□ 0.04
NFKB1-201ENST00000226574 TRIM14Q14142 442 aa15.32■□□□□ 0.04
NFKB1-201ENST00000226574 NAA35Q5VZE5 725 aa15.32■□□□□ 0.04
NFKB1-201ENST00000226574 OSBPL5Q9H0X9 879 aaPredicted RBP15.32■□□□□ 0.04
NFKB1-201ENST00000226574 TRIM49BA6NDI0 452 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 FAM205CA6NFA0 338 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 IFNAR1P17181 557 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 ST5P78524 1137 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 ST3GAL1Q11201 340 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 NBPF14Q5TI25 921 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 CC2D1AQ6P1N0 951 aaPredicted RBP15.31■□□□□ 0.04
NFKB1-201ENST00000226574 BLIDQ8IZY5 108 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 MRRFQ96E11 262 aaKnown RBP15.31■□□□□ 0.04
NFKB1-201ENST00000226574 TUBGCP2Q9BSJ2 902 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 RRP15Q9Y3B9 282 aaKnown RBP15.31■□□□□ 0.04
NFKB1-201ENST00000226574 QRICH2Q9H0J4 1663 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 CCDC151A5D8V7 595 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 H7C1W4 665 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 SLFN14P0C7P3 912 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 SCG2P13521 617 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 FDPSP14324 419 aaKnown RBP15.31■□□□□ 0.04
NFKB1-201ENST00000226574 NOX5Q96PH1 765 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 FUCA2Q9BTY2 467 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 SMCO2A6NFE2 343 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 RNF40O75150 1001 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 TUBB4BP68371 445 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 CASP8Q14790 479 aa15.31■□□□□ 0.04
NFKB1-201ENST00000226574 NONOQ15233 471 aaKnown RBP eCLIP15.31■□□□□ 0.04
NFKB1-201ENST00000226574 WHAMMP3Q1A5X7 153 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms