RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 TLR2O60603 784 aa17.02■□□□□ 0.32
SUPT4H1-201ENST00000225504 PEX10O60683 326 aa17.02■□□□□ 0.32
SUPT4H1-201ENST00000225504 HOXA7P31268 230 aaPredicted RBP17.02■□□□□ 0.32
SUPT4H1-201ENST00000225504 COL9A3Q14050 684 aaPredicted RBP17.02■□□□□ 0.32
SUPT4H1-201ENST00000225504 POTEEQ6S8J3 1075 aa17.02■□□□□ 0.32
SUPT4H1-201ENST00000225504 ZNF296Q8WUU4 475 aaPredicted RBP17.02■□□□□ 0.32
SUPT4H1-201ENST00000225504 CHMP4CQ96CF2 233 aa17.02■□□□□ 0.32
SUPT4H1-201ENST00000225504 ADGRA2Q96PE1 1338 aa17.02■□□□□ 0.31
SUPT4H1-201ENST00000225504 F5H6K3 240 aa17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 RAD21O60216 631 aa17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 TTLL1O95922 423 aa17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 NOVP48745 357 aa17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 CAP1Q01518 475 aa17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 KLRC3Q07444 240 aa17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 CREB3L3Q68CJ9 461 aa17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 RCSD1Q6JBY9 416 aa17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 C17orf99Q6UX52 265 aa17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 CATSPERGQ6ZRH7 1159 aa17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 CYB5R4Q7L1T6 521 aa17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 LRRC47Q8N1G4 583 aaKnown RBP17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 ESR2Q92731 530 aa17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 NUP88Q99567 741 aaPredicted RBP17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 RPAP3Q9H6T3 665 aaPredicted RBP17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 TCP11L1Q9NUJ3 509 aa17.01■□□□□ 0.31
SUPT4H1-201ENST00000225504 USP17L15C9J2P7 530 aa17■□□□□ 0.31
SUPT4H1-201ENST00000225504 USP17L13C9JLJ4 530 aa17■□□□□ 0.31
SUPT4H1-201ENST00000225504 USP17L11C9JVI0 530 aa17■□□□□ 0.31
SUPT4H1-201ENST00000225504 USP17L18D6R9N7 530 aa17■□□□□ 0.31
SUPT4H1-201ENST00000225504 USP17L22D6RA61 530 aa17■□□□□ 0.31
SUPT4H1-201ENST00000225504 USP17L17D6RBQ6 530 aa17■□□□□ 0.31
SUPT4H1-201ENST00000225504 USP17L19D6RCP7 530 aa17■□□□□ 0.31
SUPT4H1-201ENST00000225504 USP17L20D6RJB6 530 aa17■□□□□ 0.31
SUPT4H1-201ENST00000225504 OSBPP22059 807 aa17■□□□□ 0.31
SUPT4H1-201ENST00000225504 USP17L24Q0WX57 530 aa17■□□□□ 0.31
SUPT4H1-201ENST00000225504 PARK7Q99497 189 aaKnown RBP17■□□□□ 0.31
SUPT4H1-201ENST00000225504 SH2D4AQ9H788 454 aa17■□□□□ 0.31
SUPT4H1-201ENST00000225504 STX8Q9UNK0 236 aa17■□□□□ 0.31
SUPT4H1-201ENST00000225504 MYH4Q9Y623 1939 aa17■□□□□ 0.31
SUPT4H1-201ENST00000225504 ECM2O94769 699 aaPredicted RBP16.99■□□□□ 0.31
SUPT4H1-201ENST00000225504 NDUFB10O96000 172 aa16.99■□□□□ 0.31
SUPT4H1-201ENST00000225504 RASEFQ8IZ41 740 aa16.99■□□□□ 0.31
SUPT4H1-201ENST00000225504 KRT23Q9C075 422 aa16.99■□□□□ 0.31
SUPT4H1-201ENST00000225504 PRDM10Q9NQV6 1147 aa16.99■□□□□ 0.31
SUPT4H1-201ENST00000225504 FKTNO75072 461 aa16.99■□□□□ 0.31
SUPT4H1-201ENST00000225504 IRX3P78415 501 aaPredicted RBP16.99■□□□□ 0.31
SUPT4H1-201ENST00000225504 PABPC4Q13310 644 aaKnown RBP eCLIP16.99■□□□□ 0.311e-6■■■□□ 17.9
SUPT4H1-201ENST00000225504 NOM1Q5C9Z4 860 aaKnown RBP16.99■□□□□ 0.31
SUPT4H1-201ENST00000225504 RASGRP2Q7LDG7 609 aa16.99■□□□□ 0.31
SUPT4H1-201ENST00000225504 CHST3Q7LGC8 479 aa16.99■□□□□ 0.31
SUPT4H1-201ENST00000225504 TMEM47Q9BQJ4 181 aa16.99■□□□□ 0.31
SUPT4H1-201ENST00000225504 CNNM2Q9H8M5 875 aa16.99■□□□□ 0.31
SUPT4H1-201ENST00000225504 GOPCQ9HD26 462 aa16.99■□□□□ 0.31
SUPT4H1-201ENST00000225504 BCRP11274 1271 aa16.98■□□□□ 0.31
SUPT4H1-201ENST00000225504 HERVK_113P62684 666 aa16.98■□□□□ 0.31
SUPT4H1-201ENST00000225504 SP3Q02447 781 aa16.98■□□□□ 0.31
SUPT4H1-201ENST00000225504 FAM83BQ5T0W9 1011 aa16.98■□□□□ 0.31
SUPT4H1-201ENST00000225504 COL13A1Q5TAT6 717 aaPredicted RBP16.98■□□□□ 0.31
SUPT4H1-201ENST00000225504 ANKRD13CQ8N6S4 541 aa16.98■□□□□ 0.31
SUPT4H1-201ENST00000225504 SMCR8Q8TEV9 937 aaPredicted RBP16.98■□□□□ 0.31
SUPT4H1-201ENST00000225504 LPAR1Q92633 364 aa16.98■□□□□ 0.31
SUPT4H1-201ENST00000225504 TANGO6Q9C0B7 1094 aa16.98■□□□□ 0.31
SUPT4H1-201ENST00000225504 FBXO28Q9NVF7 368 aa16.98■□□□□ 0.31
SUPT4H1-201ENST00000225504 RBPJLQ9UBG7 517 aa16.98■□□□□ 0.31
SUPT4H1-201ENST00000225504 PNMA3Q9UL41 463 aa16.98■□□□□ 0.31
SUPT4H1-201ENST00000225504 MTMR7Q9Y216 660 aa16.98■□□□□ 0.31
SUPT4H1-201ENST00000225504 MCCP23508 829 aa16.97■□□□□ 0.31
SUPT4H1-201ENST00000225504 CTGFP29279 349 aa16.97■□□□□ 0.31
SUPT4H1-201ENST00000225504 SLFN13Q68D06 897 aa16.97■□□□□ 0.31
SUPT4H1-201ENST00000225504 NCOA7Q8NI08 942 aa16.97■□□□□ 0.31
SUPT4H1-201ENST00000225504 CD99L2Q8TCZ2 262 aa16.97■□□□□ 0.31
SUPT4H1-201ENST00000225504 ZSCAN10Q96SZ4 725 aaPredicted RBP16.97■□□□□ 0.31
SUPT4H1-201ENST00000225504 ARHGAP39Q9C0H5 1083 aa16.97■□□□□ 0.31
SUPT4H1-201ENST00000225504 TXNRD2Q9NNW7 524 aa16.97■□□□□ 0.31
SUPT4H1-201ENST00000225504 WDR46O15213 610 aaKnown RBP16.96■□□□□ 0.31
SUPT4H1-201ENST00000225504 SEC24BO95487 1268 aa16.96■□□□□ 0.31
SUPT4H1-201ENST00000225504 TOP1P11387 765 aaKnown RBP16.96■□□□□ 0.31
SUPT4H1-201ENST00000225504 ANTXR2P58335 489 aa16.96■□□□□ 0.31
SUPT4H1-201ENST00000225504 TRDNQ13061 729 aa16.96■□□□□ 0.31
SUPT4H1-201ENST00000225504 COG2Q14746 738 aa16.96■□□□□ 0.31
SUPT4H1-201ENST00000225504 Q3C1V9 767 aa16.96■□□□□ 0.31
SUPT4H1-201ENST00000225504 SAMD1Q6SPF0 538 aaPredicted RBP16.96■□□□□ 0.31
SUPT4H1-201ENST00000225504 MB21D2Q8IYB1 491 aaPredicted RBP16.96■□□□□ 0.31
SUPT4H1-201ENST00000225504 ENAHQ8N8S7 591 aaPredicted RBP16.96■□□□□ 0.31
SUPT4H1-201ENST00000225504 GMCL1P1Q8NEA9 526 aa16.96■□□□□ 0.31
SUPT4H1-201ENST00000225504 TTC14Q96N46 770 aa16.96■□□□□ 0.31
SUPT4H1-201ENST00000225504 USP26Q9BXU7 913 aa16.96■□□□□ 0.31
SUPT4H1-201ENST00000225504 SENP2Q9HC62 589 aa16.96■□□□□ 0.31
SUPT4H1-201ENST00000225504 RLFQ13129 1914 aa16.95■□□□□ 0.3
SUPT4H1-201ENST00000225504 REC8O95072 547 aa16.95■□□□□ 0.3
SUPT4H1-201ENST00000225504 SEC23AQ15436 765 aa16.95■□□□□ 0.3
SUPT4H1-201ENST00000225504 ADCK5Q3MIX3 580 aa16.95■□□□□ 0.3
SUPT4H1-201ENST00000225504 IQCA1Q86XH1 822 aa16.95■□□□□ 0.3
SUPT4H1-201ENST00000225504 DGKHQ86XP1 1220 aa16.95■□□□□ 0.3
SUPT4H1-201ENST00000225504 ANKS1AQ92625 1134 aa16.95■□□□□ 0.3
SUPT4H1-201ENST00000225504 GPHNQ9NQX3 736 aaPredicted RBP16.95■□□□□ 0.3
SUPT4H1-201ENST00000225504 SYNPO2Q9UMS6 1093 aa16.95■□□□□ 0.3
SUPT4H1-201ENST00000225504 TNKSO95271 1327 aa16.94■□□□□ 0.3
SUPT4H1-201ENST00000225504 SPDYE16A6NNV3 312 aaPredicted RBP16.94■□□□□ 0.3
SUPT4H1-201ENST00000225504 CNMDO75829 334 aa16.94■□□□□ 0.3
SUPT4H1-201ENST00000225504 FLOT1O75955 427 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms