RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 PROCA1Q8NCQ7 364 aaPredicted RBP23.31■■□□□ 1.32
HOXA6-201ENST00000222728 ZSCAN10Q96SZ4 725 aaPredicted RBP23.31■■□□□ 1.32
HOXA6-201ENST00000222728 UBAC1Q9BSL1 405 aa23.31■■□□□ 1.32
HOXA6-201ENST00000222728 VCPKMTQ9H867 229 aa23.31■■□□□ 1.32
HOXA6-201ENST00000222728 AGTPBP1Q9UPW5 1226 aa23.31■■□□□ 1.32
HOXA6-201ENST00000222728 TNKSO95271 1327 aa23.31■■□□□ 1.32
HOXA6-201ENST00000222728 PDHXO00330 501 aa23.3■■□□□ 1.32
HOXA6-201ENST00000222728 VCAM1P19320 739 aa23.3■■□□□ 1.32
HOXA6-201ENST00000222728 ANKRD23Q86SG2 305 aa23.3■■□□□ 1.32
HOXA6-201ENST00000222728 ENAHQ8N8S7 591 aaPredicted RBP23.3■■□□□ 1.32
HOXA6-201ENST00000222728 MKL1Q969V6 931 aa23.3■■□□□ 1.32
HOXA6-201ENST00000222728 C12orf42Q96LP6 360 aa23.3■■□□□ 1.32
HOXA6-201ENST00000222728 GOPCQ9HD26 462 aa23.3■■□□□ 1.32
HOXA6-201ENST00000222728 RNF186Q9NXI6 227 aa23.3■■□□□ 1.32
HOXA6-201ENST00000222728 MTMR7Q9Y216 660 aa23.3■■□□□ 1.32
HOXA6-201ENST00000222728 CASP8AP2Q9UKL3 1982 aa23.29■■□□□ 1.32
HOXA6-201ENST00000222728 TRPA1O75762 1119 aa23.29■■□□□ 1.32
HOXA6-201ENST00000222728 NOVP48745 357 aa23.29■■□□□ 1.32
HOXA6-201ENST00000222728 NT5C2P49902 561 aa23.29■■□□□ 1.32
HOXA6-201ENST00000222728 KRT32Q14532 448 aa23.29■■□□□ 1.32
HOXA6-201ENST00000222728 OTUD7BQ6GQQ9 843 aa23.29■■□□□ 1.32
HOXA6-201ENST00000222728 JAKMIP1Q96N16 626 aaKnown RBP23.29■■□□□ 1.32
HOXA6-201ENST00000222728 NEK1Q96PY6 1258 aa23.29■■□□□ 1.32
HOXA6-201ENST00000222728 TMEM47Q9BQJ4 181 aa23.29■■□□□ 1.32
HOXA6-201ENST00000222728 WBP1LQ9NX94 342 aa23.29■■□□□ 1.32
HOXA6-201ENST00000222728 MYH6P13533 1939 aa23.28■■□□□ 1.32
HOXA6-201ENST00000222728 IFIT3O14879 490 aaKnown RBP23.28■■□□□ 1.32
HOXA6-201ENST00000222728 PRC1O43663 620 aa23.28■■□□□ 1.32
HOXA6-201ENST00000222728 EIF5BO60841 1220 aaKnown RBP23.28■■□□□ 1.32
HOXA6-201ENST00000222728 NDUFB10O96000 172 aa23.28■■□□□ 1.32
HOXA6-201ENST00000222728 TOP1P11387 765 aaKnown RBP23.28■■□□□ 1.32
HOXA6-201ENST00000222728 CPA1P15085 419 aa23.28■■□□□ 1.32
HOXA6-201ENST00000222728 PPP4R3BQ5MIZ7 849 aa23.28■■□□□ 1.32
HOXA6-201ENST00000222728 RASGRP2Q7LDG7 609 aa23.28■■□□□ 1.32
HOXA6-201ENST00000222728 TCEANC2Q96MN5 208 aa23.28■■□□□ 1.32
HOXA6-201ENST00000222728 NUP88Q99567 741 aaPredicted RBP23.28■■□□□ 1.32
HOXA6-201ENST00000222728 LRRC2Q9BYS8 371 aa23.28■■□□□ 1.32
HOXA6-201ENST00000222728 RPAP3Q9H6T3 665 aaPredicted RBP23.28■■□□□ 1.32
HOXA6-201ENST00000222728 GPHNQ9NQX3 736 aaPredicted RBP23.28■■□□□ 1.32
HOXA6-201ENST00000222728 TSKSQ9UJT2 592 aa23.28■■□□□ 1.32
HOXA6-201ENST00000222728 BAZ2BQ9UIF8 2168 aaKnown RBP23.28■■□□□ 1.32
HOXA6-201ENST00000222728 F5H6K3 240 aa23.27■■□□□ 1.32
HOXA6-201ENST00000222728 MCM5P33992 734 aa23.27■■□□□ 1.32
HOXA6-201ENST00000222728 KLRC3Q07444 240 aa23.27■■□□□ 1.32
HOXA6-201ENST00000222728 TAF1CQ15572 869 aaPredicted RBP23.27■■□□□ 1.32
HOXA6-201ENST00000222728 BEGAINQ9BUH8 593 aa23.27■■□□□ 1.32
HOXA6-201ENST00000222728 SENP2Q9HC62 589 aa23.27■■□□□ 1.32
HOXA6-201ENST00000222728 TBC1D8O95759 1140 aa23.26■■□□□ 1.31
HOXA6-201ENST00000222728 CYP2C8P10632 490 aa23.26■■□□□ 1.31
HOXA6-201ENST00000222728 SEC23AQ15436 765 aa23.26■■□□□ 1.31
HOXA6-201ENST00000222728 CCDC178Q5BJE1 867 aa23.26■■□□□ 1.31
HOXA6-201ENST00000222728 TMEM67Q5HYA8 995 aa23.26■■□□□ 1.31
HOXA6-201ENST00000222728 SLFN13Q68D06 897 aa23.26■■□□□ 1.31
HOXA6-201ENST00000222728 DGKHQ86XP1 1220 aa23.26■■□□□ 1.31
HOXA6-201ENST00000222728 TTC14Q96N46 770 aa23.26■■□□□ 1.31
HOXA6-201ENST00000222728 R3HDMLQ9H3Y0 253 aa23.26■■□□□ 1.31
HOXA6-201ENST00000222728 DOCK3Q8IZD9 2030 aa23.25■■□□□ 1.31
HOXA6-201ENST00000222728 CRHR2Q13324 411 aa23.25■■□□□ 1.31
HOXA6-201ENST00000222728 FAM83BQ5T0W9 1011 aa23.25■■□□□ 1.31
HOXA6-201ENST00000222728 IFIT1BQ5T764 474 aaKnown RBP23.25■■□□□ 1.31
HOXA6-201ENST00000222728 GMCL1P1Q8NEA9 526 aa23.25■■□□□ 1.31
HOXA6-201ENST00000222728 LPAR1Q92633 364 aa23.25■■□□□ 1.31
HOXA6-201ENST00000222728 TANGO6Q9C0B7 1094 aa23.25■■□□□ 1.31
HOXA6-201ENST00000222728 ASCC2Q9H1I8 757 aaPredicted RBP23.25■■□□□ 1.31
HOXA6-201ENST00000222728 MGAMO43451 1857 aa23.25■■□□□ 1.31
HOXA6-201ENST00000222728 ERICH2A1L162 156 aa23.24■■□□□ 1.31
HOXA6-201ENST00000222728 ALDH1A1P00352 501 aa23.24■■□□□ 1.31
HOXA6-201ENST00000222728 HSPA1AP0DMV8 641 aaKnown RBP23.24■■□□□ 1.31
HOXA6-201ENST00000222728 HSPA1BP0DMV9 641 aaKnown RBP23.24■■□□□ 1.31
HOXA6-201ENST00000222728 CASTP20810 708 aaKnown RBP23.24■■□□□ 1.31
HOXA6-201ENST00000222728 SART3Q15020 963 aaKnown RBP23.24■■□□□ 1.31
HOXA6-201ENST00000222728 IGDCC4Q8TDY8 1250 aa23.24■■□□□ 1.31
HOXA6-201ENST00000222728 ANKS1AQ92625 1134 aa23.24■■□□□ 1.31
HOXA6-201ENST00000222728 KAT14Q9H8E8 782 aa23.24■■□□□ 1.31
HOXA6-201ENST00000222728 ZCCHC17Q9NP64 241 aaKnown RBP23.24■■□□□ 1.31
HOXA6-201ENST00000222728 ISY1Q9ULR0 285 aaKnown RBP23.24■■□□□ 1.31
HOXA6-201ENST00000222728 SYNPO2Q9UMS6 1093 aa23.24■■□□□ 1.31
HOXA6-201ENST00000222728 SLC45A1Q9Y2W3 748 aa23.24■■□□□ 1.31
HOXA6-201ENST00000222728 SMCHD1A6NHR9 2005 aa23.24■■□□□ 1.31
HOXA6-201ENST00000222728 ZSWIM8A7E2V4 1837 aa23.24■■□□□ 1.31
HOXA6-201ENST00000222728 USP17L15C9J2P7 530 aa23.23■■□□□ 1.31
HOXA6-201ENST00000222728 USP17L13C9JLJ4 530 aa23.23■■□□□ 1.31
HOXA6-201ENST00000222728 USP17L11C9JVI0 530 aa23.23■■□□□ 1.31
HOXA6-201ENST00000222728 USP17L18D6R9N7 530 aa23.23■■□□□ 1.31
HOXA6-201ENST00000222728 USP17L22D6RA61 530 aa23.23■■□□□ 1.31
HOXA6-201ENST00000222728 USP17L17D6RBQ6 530 aa23.23■■□□□ 1.31
HOXA6-201ENST00000222728 USP17L19D6RCP7 530 aa23.23■■□□□ 1.31
HOXA6-201ENST00000222728 USP17L20D6RJB6 530 aa23.23■■□□□ 1.31
HOXA6-201ENST00000222728 WDR46O15213 610 aaKnown RBP23.23■■□□□ 1.31
HOXA6-201ENST00000222728 CA12O43570 354 aa23.23■■□□□ 1.31
HOXA6-201ENST00000222728 HOXA7P31268 230 aaPredicted RBP23.23■■□□□ 1.31
HOXA6-201ENST00000222728 IRX3P78415 501 aaPredicted RBP23.23■■□□□ 1.31
HOXA6-201ENST00000222728 USP17L24Q0WX57 530 aa23.23■■□□□ 1.31
HOXA6-201ENST00000222728 PABPC4Q13310 644 aaKnown RBP eCLIP23.23■■□□□ 1.31
HOXA6-201ENST00000222728 WTAPQ15007 396 aa23.23■■□□□ 1.31
HOXA6-201ENST00000222728 BLOC1S2Q6QNY1 142 aa23.23■■□□□ 1.31
HOXA6-201ENST00000222728 SAMD1Q6SPF0 538 aaPredicted RBP23.23■■□□□ 1.31
HOXA6-201ENST00000222728 CATSPERGQ6ZRH7 1159 aa23.23■■□□□ 1.31
HOXA6-201ENST00000222728 DHX32Q7L7V1 743 aaKnown RBP23.23■■□□□ 1.31
HOXA6-201ENST00000222728 PNMA1Q8ND90 353 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms