RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 TMOD4Q9NZQ9 345 aa16.18■□□□□ 0.18
UPK1A-201ENST00000222275 U3KPZ7 1027 aaPredicted RBP16.18■□□□□ 0.18
UPK1A-201ENST00000222275 DDX60LQ5H9U9 1706 aaKnown RBP16.18■□□□□ 0.18
UPK1A-201ENST00000222275 TNPO2O14787 897 aaKnown RBP16.17■□□□□ 0.18
UPK1A-201ENST00000222275 EPB41L2O43491 1005 aaKnown RBP16.17■□□□□ 0.18
UPK1A-201ENST00000222275 ADCY3O60266 1144 aa16.17■□□□□ 0.18
UPK1A-201ENST00000222275 PCP11498 1178 aaKnown RBP16.17■□□□□ 0.18
UPK1A-201ENST00000222275 CCL5P13501 91 aa16.17■□□□□ 0.18
UPK1A-201ENST00000222275 GCLCP48506 637 aaPredicted RBP16.17■□□□□ 0.18
UPK1A-201ENST00000222275 CDK8P49336 464 aa16.17■□□□□ 0.18
UPK1A-201ENST00000222275 PDE4BQ07343 736 aa16.17■□□□□ 0.18
UPK1A-201ENST00000222275 TRIM32Q13049 653 aa16.17■□□□□ 0.18
UPK1A-201ENST00000222275 IMMTQ16891 758 aaKnown RBP16.17■□□□□ 0.18
UPK1A-201ENST00000222275 VPS53Q5VIR6 699 aa16.17■□□□□ 0.18
UPK1A-201ENST00000222275 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.17■□□□□ 0.18
UPK1A-201ENST00000222275 TMEM106CQ9BVX2 250 aa16.17■□□□□ 0.18
UPK1A-201ENST00000222275 KIAA1683Q9H0B3 1180 aa16.17■□□□□ 0.18
UPK1A-201ENST00000222275 UNC93B1Q9H1C4 597 aa16.17■□□□□ 0.18
UPK1A-201ENST00000222275 PORCNQ9H237 461 aa16.17■□□□□ 0.18
UPK1A-201ENST00000222275 PNMA3Q9UL41 463 aa16.17■□□□□ 0.18
UPK1A-201ENST00000222275 BAZ2AQ9UIF9 1905 aaKnown RBP16.17■□□□□ 0.18
UPK1A-201ENST00000222275 MGAMO43451 1857 aa16.16■□□□□ 0.18
UPK1A-201ENST00000222275 ZNF213O14771 459 aa16.16■□□□□ 0.18
UPK1A-201ENST00000222275 PPARAQ07869 468 aa16.16■□□□□ 0.18
UPK1A-201ENST00000222275 IRF5Q13568 498 aa16.16■□□□□ 0.18
UPK1A-201ENST00000222275 CATSPERGQ6ZRH7 1159 aa16.16■□□□□ 0.18
UPK1A-201ENST00000222275 CCDC17Q96LX7 622 aa16.16■□□□□ 0.18
UPK1A-201ENST00000222275 RNF41Q9H4P4 317 aaPredicted RBP16.16■□□□□ 0.18
UPK1A-201ENST00000222275 ANO2Q9NQ90 1003 aa16.16■□□□□ 0.18
UPK1A-201ENST00000222275 ANAPC4Q9UJX5 808 aa16.16■□□□□ 0.18
UPK1A-201ENST00000222275 ROBO3Q96MS0 1386 aa16.15■□□□□ 0.18
UPK1A-201ENST00000222275 FOXP2O15409 715 aa16.15■□□□□ 0.18
UPK1A-201ENST00000222275 VCAM1P19320 739 aa16.15■□□□□ 0.18
UPK1A-201ENST00000222275 IRX3P78415 501 aaPredicted RBP16.15■□□□□ 0.18
UPK1A-201ENST00000222275 PABPC4Q13310 644 aaKnown RBP eCLIP16.15■□□□□ 0.18
UPK1A-201ENST00000222275 C16orf86Q6ZW13 317 aa16.15■□□□□ 0.18
UPK1A-201ENST00000222275 MAP4K1Q92918 833 aa16.15■□□□□ 0.18
UPK1A-201ENST00000222275 MKNK2Q9HBH9 465 aa16.15■□□□□ 0.18
UPK1A-201ENST00000222275 BTBD7Q9P203 1132 aa16.15■□□□□ 0.18
UPK1A-201ENST00000222275 DNAH12Q6ZR08 3092 aa16.15■□□□□ 0.18
UPK1A-201ENST00000222275 MPHOSPH10O00566 681 aaKnown RBP16.14■□□□□ 0.17
UPK1A-201ENST00000222275 INHAP05111 366 aa16.14■□□□□ 0.17
UPK1A-201ENST00000222275 RNF20Q5VTR2 975 aa16.14■□□□□ 0.17
UPK1A-201ENST00000222275 UBE2Q1Q7Z7E8 422 aa16.14■□□□□ 0.17
UPK1A-201ENST00000222275 STK11IPQ8N1F8 1099 aa16.14■□□□□ 0.17
UPK1A-201ENST00000222275 GPRC5AQ8NFJ5 357 aa16.14■□□□□ 0.17
UPK1A-201ENST00000222275 USP6NLQ92738 828 aa16.14■□□□□ 0.17
UPK1A-201ENST00000222275 CABP5Q9NP86 173 aa16.14■□□□□ 0.17
UPK1A-201ENST00000222275 USP17L15C9J2P7 530 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 USP17L13C9JLJ4 530 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 USP17L11C9JVI0 530 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 USP17L18D6R9N7 530 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 USP17L22D6RA61 530 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 USP17L17D6RBQ6 530 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 USP17L19D6RCP7 530 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 USP17L20D6RJB6 530 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 ERVK-9P63128 1117 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 ERVK-24P63145 666 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 USP17L24Q0WX57 530 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 ZNF444Q8N0Y2 327 aaPredicted RBP16.13■□□□□ 0.17
UPK1A-201ENST00000222275 SLAIN1Q8ND83 568 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 PXYLP1Q8TE99 480 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 FEZ1Q99689 392 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 PAGR1Q9BTK6 254 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 LSG1Q9H089 658 aaKnown RBP16.13■□□□□ 0.17
UPK1A-201ENST00000222275 RNF208Q9H0X6 261 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 IL25Q9H293 177 aa16.13■□□□□ 0.17
UPK1A-201ENST00000222275 RPAP3Q9H6T3 665 aaPredicted RBP16.13■□□□□ 0.17
UPK1A-201ENST00000222275 BIN2Q9UBW5 565 aaPredicted RBP16.13■□□□□ 0.17
UPK1A-201ENST00000222275 GJB1P08034 283 aa16.12■□□□□ 0.17
UPK1A-201ENST00000222275 PPP4R3BQ5MIZ7 849 aa16.12■□□□□ 0.17
UPK1A-201ENST00000222275 MFSD6Q6ZSS7 791 aa16.12■□□□□ 0.17
UPK1A-201ENST00000222275 COA7Q96BR5 231 aa16.12■□□□□ 0.17
UPK1A-201ENST00000222275 PLXNB2O15031 1838 aa16.12■□□□□ 0.17
UPK1A-201ENST00000222275 SPDYE16A6NNV3 312 aaPredicted RBP16.11■□□□□ 0.17
UPK1A-201ENST00000222275 CYP2B6P20813 491 aa16.11■□□□□ 0.17
UPK1A-201ENST00000222275 GJA8P48165 433 aa16.11■□□□□ 0.17
UPK1A-201ENST00000222275 PTH1RQ03431 593 aa16.11■□□□□ 0.17
UPK1A-201ENST00000222275 CCL14Q16627 93 aa16.11■□□□□ 0.17
UPK1A-201ENST00000222275 MORN1Q5T089 497 aa16.11■□□□□ 0.17
UPK1A-201ENST00000222275 AKNAD1Q5T1N1 836 aa16.11■□□□□ 0.17
UPK1A-201ENST00000222275 PRPF38BQ5VTL8 546 aaKnown RBP16.11■□□□□ 0.17
UPK1A-201ENST00000222275 TMEM179Q6ZVK1 233 aa16.11■□□□□ 0.17
UPK1A-201ENST00000222275 CNNM2Q9H8M5 875 aa16.11■□□□□ 0.17
UPK1A-201ENST00000222275 RBM8AQ9Y5S9 174 aaKnown RBP16.11■□□□□ 0.17
UPK1A-201ENST00000222275 TACC3Q9Y6A5 838 aa16.11■□□□□ 0.17
UPK1A-201ENST00000222275 SZT2Q5T011 3432 aa16.11■□□□□ 0.17
UPK1A-201ENST00000222275 RBBP6Q7Z6E9 1792 aaKnown RBP16.1■□□□□ 0.17
UPK1A-201ENST00000222275 MYH8P13535 1937 aa16.1■□□□□ 0.17
UPK1A-201ENST00000222275 ORC4O43929 436 aa16.1■□□□□ 0.17
UPK1A-201ENST00000222275 FGRP09769 529 aa16.1■□□□□ 0.17
UPK1A-201ENST00000222275 EEF2P13639 858 aaKnown RBP16.1■□□□□ 0.17
UPK1A-201ENST00000222275 ZKSCAN1P17029 563 aaPredicted RBP16.1■□□□□ 0.17
UPK1A-201ENST00000222275 RASA1P20936 1047 aa16.1■□□□□ 0.17
UPK1A-201ENST00000222275 MCCP23508 829 aa16.1■□□□□ 0.17
UPK1A-201ENST00000222275 USP14P54578 494 aa16.1■□□□□ 0.17
UPK1A-201ENST00000222275 TRDNQ13061 729 aa16.1■□□□□ 0.17
UPK1A-201ENST00000222275 SPICE1Q8N0Z3 855 aa16.1■□□□□ 0.17
UPK1A-201ENST00000222275 U2AF1L4Q8WU68 220 aaKnown RBP16.1■□□□□ 0.17
UPK1A-201ENST00000222275 STAG1Q8WVM7 1258 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms