RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 MKL1Q969V6 931 aa31.33■■■□□ 2.61
STUB1-201ENST00000219548 TMEM47Q9BQJ4 181 aa31.33■■■□□ 2.61
STUB1-201ENST00000219548 GPHNQ9NQX3 736 aaPredicted RBP31.33■■■□□ 2.61
STUB1-201ENST00000219548 TMOD4Q9NZQ9 345 aa31.33■■■□□ 2.61
STUB1-201ENST00000219548 ANAPC15P60006 121 aa31.32■■■□□ 2.6
STUB1-201ENST00000219548 SREBF2Q12772 1141 aa31.32■■■□□ 2.6
STUB1-201ENST00000219548 SEC23AQ15436 765 aa31.32■■■□□ 2.6
STUB1-201ENST00000219548 CCDC178Q5BJE1 867 aa31.32■■■□□ 2.6
STUB1-201ENST00000219548 BLOC1S2Q6QNY1 142 aa31.32■■■□□ 2.6
STUB1-201ENST00000219548 SPICE1Q8N0Z3 855 aa31.32■■■□□ 2.6
STUB1-201ENST00000219548 PTPN18Q99952 460 aa31.32■■■□□ 2.6
STUB1-201ENST00000219548 VCPKMTQ9H867 229 aa31.32■■■□□ 2.6
STUB1-201ENST00000219548 TESPA1A2RU30 521 aaPredicted RBP31.31■■■□□ 2.6
STUB1-201ENST00000219548 PSMA5P28066 241 aa31.31■■■□□ 2.6
STUB1-201ENST00000219548 TREML2Q5T2D2 321 aa31.31■■■□□ 2.6
STUB1-201ENST00000219548 DHX32Q7L7V1 743 aaKnown RBP31.31■■■□□ 2.6
STUB1-201ENST00000219548 DGKHQ86XP1 1220 aa31.31■■■□□ 2.6
STUB1-201ENST00000219548 TTC14Q96N46 770 aa31.31■■■□□ 2.6
STUB1-201ENST00000219548 SENP2Q9HC62 589 aa31.31■■■□□ 2.6
STUB1-201ENST00000219548 ERICH2A1L162 156 aa31.3■■■□□ 2.6
STUB1-201ENST00000219548 IGF2BP3O00425 579 aaKnown RBP eCLIP31.3■■■□□ 2.6
STUB1-201ENST00000219548 HMGB1P09429 215 aaKnown RBP31.3■■■□□ 2.6
STUB1-201ENST00000219548 TOP1P11387 765 aaKnown RBP31.3■■■□□ 2.6
STUB1-201ENST00000219548 EXOSC10Q01780 885 aaKnown RBP31.3■■■□□ 2.6
STUB1-201ENST00000219548 SART3Q15020 963 aaKnown RBP31.3■■■□□ 2.6
STUB1-201ENST00000219548 TMEM67Q5HYA8 995 aa31.3■■■□□ 2.6
STUB1-201ENST00000219548 FASTKD5Q7L8L6 764 aaKnown RBP31.3■■■□□ 2.6
STUB1-201ENST00000219548 PROCA1Q8NCQ7 364 aaPredicted RBP31.3■■■□□ 2.6
STUB1-201ENST00000219548 IGDCC4Q8TDY8 1250 aa31.3■■■□□ 2.6
STUB1-201ENST00000219548 CHMP4CQ96CF2 233 aa31.3■■■□□ 2.6
STUB1-201ENST00000219548 GOPCQ9HD26 462 aa31.3■■■□□ 2.6
STUB1-201ENST00000219548 BTBD19C9JJ37 291 aa31.29■■■□□ 2.6
STUB1-201ENST00000219548 IFIT1BQ5T764 474 aaKnown RBP31.29■■■□□ 2.6
STUB1-201ENST00000219548 GPAT2Q6NUI2 795 aa31.29■■■□□ 2.6
STUB1-201ENST00000219548 RASGRP2Q7LDG7 609 aa31.29■■■□□ 2.6
STUB1-201ENST00000219548 C12orf42Q96LP6 360 aa31.29■■■□□ 2.6
STUB1-201ENST00000219548 UPF3BQ9BZI7 483 aaKnown RBP31.29■■■□□ 2.6
STUB1-201ENST00000219548 MTMR7Q9Y216 660 aa31.29■■■□□ 2.6
STUB1-201ENST00000219548 F5H6K3 240 aa31.28■■■□□ 2.6
STUB1-201ENST00000219548 VCAM1P19320 739 aa31.28■■■□□ 2.6
STUB1-201ENST00000219548 TM4SF4P48230 202 aa31.28■■■□□ 2.6
STUB1-201ENST00000219548 KLRC3Q07444 240 aa31.28■■■□□ 2.6
STUB1-201ENST00000219548 WTAPQ15007 396 aa31.28■■■□□ 2.6
STUB1-201ENST00000219548 FAM43AQ8N2R8 423 aa31.28■■■□□ 2.6
STUB1-201ENST00000219548 ANKS1AQ92625 1134 aa31.28■■■□□ 2.6
STUB1-201ENST00000219548 ZSWIM6Q9HCJ5 1215 aa31.28■■■□□ 2.6
STUB1-201ENST00000219548 SH2B2O14492 632 aaPredicted RBP31.27■■■□□ 2.6
STUB1-201ENST00000219548 NDUFB10O96000 172 aa31.27■■■□□ 2.6
STUB1-201ENST00000219548 RPS6KB1P23443 525 aa31.27■■■□□ 2.6
STUB1-201ENST00000219548 INHBEP58166 350 aa31.27■■■□□ 2.6
STUB1-201ENST00000219548 IFNL1Q8IU54 200 aa31.27■■■□□ 2.6
STUB1-201ENST00000219548 TMEM87BQ96K49 555 aa31.27■■■□□ 2.6
STUB1-201ENST00000219548 TM6SF1Q9BZW5 370 aa31.27■■■□□ 2.6
STUB1-201ENST00000219548 LY9Q9HBG7 655 aa31.27■■■□□ 2.6
STUB1-201ENST00000219548 WDR19Q8NEZ3 1342 aa31.27■■■□□ 2.6
STUB1-201ENST00000219548 RBM25P49756 843 aaKnown RBP31.27■■■□□ 2.6
STUB1-201ENST00000219548 IL17RAQ96F46 866 aa31.27■■■□□ 2.6
STUB1-201ENST00000219548 KAT14Q9H8E8 782 aa31.27■■■□□ 2.6
STUB1-201ENST00000219548 SYNPO2Q9UMS6 1093 aa31.27■■■□□ 2.6
STUB1-201ENST00000219548 AGTPBP1Q9UPW5 1226 aa31.27■■■□□ 2.6
STUB1-201ENST00000219548 PARP14Q460N5 1801 aa31.26■■■□□ 2.6
STUB1-201ENST00000219548 RUFY3Q7L099 469 aa31.26■■■□□ 2.59
STUB1-201ENST00000219548 PNMA1Q8ND90 353 aa31.26■■■□□ 2.59
STUB1-201ENST00000219548 GMCL1P1Q8NEA9 526 aa31.26■■■□□ 2.59
STUB1-201ENST00000219548 LPAR1Q92633 364 aa31.26■■■□□ 2.59
STUB1-201ENST00000219548 NUP88Q99567 741 aaPredicted RBP31.26■■■□□ 2.59
STUB1-201ENST00000219548 CYP46A1Q9Y6A2 500 aa31.26■■■□□ 2.59
STUB1-201ENST00000219548 SLFN13Q68D06 897 aa31.25■■■□□ 2.59
STUB1-201ENST00000219548 ANKRD23Q86SG2 305 aa31.25■■■□□ 2.59
STUB1-201ENST00000219548 REM2Q8IYK8 340 aaPredicted RBP31.25■■■□□ 2.59
STUB1-201ENST00000219548 MTA3Q9BTC8 594 aa31.25■■■□□ 2.59
STUB1-201ENST00000219548 RPAP3Q9H6T3 665 aaPredicted RBP31.24■■■□□ 2.59
STUB1-201ENST00000219548 RLFQ13129 1914 aa31.23■■■□□ 2.59
STUB1-201ENST00000219548 PDHXO00330 501 aa31.23■■■□□ 2.59
STUB1-201ENST00000219548 FAM83BQ5T0W9 1011 aa31.23■■■□□ 2.59
STUB1-201ENST00000219548 Q6ZUG5 572 aa31.23■■■□□ 2.59
STUB1-201ENST00000219548 TBC1D32Q96NH3 1257 aa31.23■■■□□ 2.59
STUB1-201ENST00000219548 WDR46O15213 610 aaKnown RBP31.22■■■□□ 2.59
STUB1-201ENST00000219548 KIF2CQ99661 725 aa31.22■■■□□ 2.59
STUB1-201ENST00000219548 FGD1P98174 961 aa31.21■■■□□ 2.59
STUB1-201ENST00000219548 TANGO6Q9C0B7 1094 aa31.21■■■□□ 2.59
STUB1-201ENST00000219548 ISY1Q9ULR0 285 aaKnown RBP31.21■■■□□ 2.59
STUB1-201ENST00000219548 LIFRP42702 1097 aa31.21■■■□□ 2.59
STUB1-201ENST00000219548 OTUD7BQ6GQQ9 843 aa31.21■■■□□ 2.59
STUB1-201ENST00000219548 NFXL1Q6ZNB6 911 aa31.21■■■□□ 2.59
STUB1-201ENST00000219548 PDHBP11177 359 aa31.2■■■□□ 2.58
STUB1-201ENST00000219548 GMCL1Q96IK5 515 aa31.2■■■□□ 2.58
STUB1-201ENST00000219548 USP17L15C9J2P7 530 aa31.19■■■□□ 2.58
STUB1-201ENST00000219548 USP17L13C9JLJ4 530 aa31.19■■■□□ 2.58
STUB1-201ENST00000219548 USP17L11C9JVI0 530 aa31.19■■■□□ 2.58
STUB1-201ENST00000219548 USP17L18D6R9N7 530 aa31.19■■■□□ 2.58
STUB1-201ENST00000219548 USP17L22D6RA61 530 aa31.19■■■□□ 2.58
STUB1-201ENST00000219548 USP17L17D6RBQ6 530 aa31.19■■■□□ 2.58
STUB1-201ENST00000219548 USP17L19D6RCP7 530 aa31.19■■■□□ 2.58
STUB1-201ENST00000219548 USP17L20D6RJB6 530 aa31.19■■■□□ 2.58
STUB1-201ENST00000219548 CYP2C8P10632 490 aa31.19■■■□□ 2.58
STUB1-201ENST00000219548 HOXA7P31268 230 aaPredicted RBP31.19■■■□□ 2.58
STUB1-201ENST00000219548 SLC1A4P43007 532 aa31.19■■■□□ 2.58
STUB1-201ENST00000219548 USP17L24Q0WX57 530 aa31.19■■■□□ 2.58
STUB1-201ENST00000219548 PABPC4Q13310 644 aaKnown RBP eCLIP31.19■■■□□ 2.582e-8■■■■□ 22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms