RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 RPGRIP1Q96KN7 1286 aa16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 PPP2R2CQ9Y2T4 447 aa16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 KIF3CO14782 793 aa16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 ZNF500O60304 480 aaPredicted RBP16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 LGSNQ5TDP6 509 aa16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 DENND4BO75064 1496 aaPredicted RBP16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 MAP2K2P36507 400 aa16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 TRIM58Q8NG06 486 aa16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 AMFRQ9UKV5 643 aa16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 KDM5BQ9UGL1 1544 aa16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 BTBD18B2RXH4 712 aa16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 I3L4J1 428 aa16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 ZNF654Q8IZM8 581 aa16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 ZNF496Q96IT1 587 aaPredicted RBP16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 DPH5Q9H2P9 285 aa16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 SH2D4AQ9H788 454 aa16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 TPCN1Q9ULQ1 816 aa16.55■□□□□ 0.24
NDFIP2-201ENST00000218652 A0A0D9SFI3 127 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 BUB1O43683 1085 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 CNBD1Q8NA66 436 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 EAF2Q96CJ1 260 aaPredicted RBP16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 EXOC7Q9UPT5 735 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 USP17L12C9JPN9 530 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 USP17L21D6R901 530 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 CAPN12Q6ZSI9 719 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 ST7Q9NRC1 585 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 IBTKQ9P2D0 1353 aaPredicted RBP16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 KRT19P08727 400 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 SARNPP82979 210 aaKnown RBP16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 LRRC8AQ8IWT6 810 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 RNF10Q8N5U6 811 aaKnown RBP16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 RAB17Q9H0T7 212 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 GLT8D2Q9H1C3 349 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 KCNJ18B7U540 433 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 KRIT1O00522 736 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 HOXB7P09629 217 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 TCP10Q12799 353 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 KCNJ12Q14500 433 aa16.54■□□□□ 0.24
NDFIP2-201ENST00000218652 ATP5JP18859 108 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 WHAMMP3Q1A5X7 153 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 NOSTRINQ8IVI9 506 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 USP44Q9H0E7 712 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 KCNA6P17658 529 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 TNNI1P19237 187 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 PARP10Q53GL7 1025 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 TPH2Q8IWU9 490 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 CEP120Q8N960 986 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 SPATA5Q8NB90 893 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 GPT2Q8TD30 523 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 CCDC51Q96ER9 411 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 CLIC6Q96NY7 704 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 HOMER3Q9NSC5 361 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 NBPF14Q5TI25 921 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 CCDC117Q8IWD4 279 aaPredicted RBP16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 NUCKS1Q9H1E3 243 aaKnown RBP16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 VCXQ9H320 206 aa16.53■□□□□ 0.24
NDFIP2-201ENST00000218652 ZNF853P0CG23 659 aa16.52■□□□□ 0.24
NDFIP2-201ENST00000218652 XRCC5P13010 732 aaKnown RBP16.52■□□□□ 0.24
NDFIP2-201ENST00000218652 DNAJC10Q8IXB1 793 aa16.52■□□□□ 0.24
NDFIP2-201ENST00000218652 NRBP1Q9UHY1 535 aa16.52■□□□□ 0.24
NDFIP2-201ENST00000218652 PYCARDQ9ULZ3 195 aa16.52■□□□□ 0.24
NDFIP2-201ENST00000218652 PCDHA7Q9UN72 937 aa16.52■□□□□ 0.24
NDFIP2-201ENST00000218652 PARP3Q9Y6F1 533 aa16.52■□□□□ 0.24
NDFIP2-201ENST00000218652 SMCO2A6NFE2 343 aa16.52■□□□□ 0.24
NDFIP2-201ENST00000218652 HIP1RO75146 1068 aa16.52■□□□□ 0.24
NDFIP2-201ENST00000218652 DIXDC1Q155Q3 683 aa16.52■□□□□ 0.24
NDFIP2-201ENST00000218652 CCDC89Q8N998 374 aa16.52■□□□□ 0.24
NDFIP2-201ENST00000218652 TRIM6Q9C030 488 aaPredicted RBP16.52■□□□□ 0.24
NDFIP2-201ENST00000218652 ARHGEF10LQ9HCE6 1279 aa16.52■□□□□ 0.24
NDFIP2-201ENST00000218652 GPATCH8Q9UKJ3 1502 aaKnown RBP16.52■□□□□ 0.24
NDFIP2-201ENST00000218652 EFCAB8A8MWE9 144 aa16.52■□□□□ 0.23
NDFIP2-201ENST00000218652 CYP2J2P51589 502 aa16.52■□□□□ 0.23
NDFIP2-201ENST00000218652 FAM71BQ8TC56 605 aa16.52■□□□□ 0.23
NDFIP2-201ENST00000218652 DSCC1Q9BVC3 393 aa16.52■□□□□ 0.23
NDFIP2-201ENST00000218652 HAUS4Q9H6D7 363 aa16.52■□□□□ 0.23
NDFIP2-201ENST00000218652 KLHL14Q9P2G3 628 aa16.52■□□□□ 0.23
NDFIP2-201ENST00000218652 BIN2Q9UBW5 565 aaPredicted RBP16.52■□□□□ 0.23
NDFIP2-201ENST00000218652 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.52■□□□□ 0.23
NDFIP2-201ENST00000218652 RIMS2Q9UQ26 1411 aa16.52■□□□□ 0.23
NDFIP2-201ENST00000218652 DNM2P50570 870 aa16.52■□□□□ 0.23
NDFIP2-201ENST00000218652 TGFBRAP1Q8WUH2 860 aa16.52■□□□□ 0.23
NDFIP2-201ENST00000218652 LSM14BQ9BX40 385 aaKnown RBP16.52■□□□□ 0.23
NDFIP2-201ENST00000218652 TTC36A6NLP5 189 aa16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 NOP56O00567 594 aaKnown RBP16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 STK10O94804 968 aaKnown RBP16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 CLTAP09496 248 aa16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 NAA35Q5VZE5 725 aa16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 KCTD16Q68DU8 428 aa16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 MRFAP1L1Q96HT8 127 aa16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 C19orf44Q9H6X5 657 aa16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 HYOU1Q9Y4L1 999 aa16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 PCDHA5Q9Y5H7 936 aa16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 TRIM68Q6AZZ1 485 aa16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 PHLDB2Q86SQ0 1253 aa16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 ARMCX3Q9UH62 379 aaPredicted RBP16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 KIF14Q15058 1648 aa16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 TRAPPC3LQ5T215 181 aa16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 ZNF274Q96GC6 653 aaPredicted RBP16.51■□□□□ 0.23
NDFIP2-201ENST00000218652 EPN1Q9Y6I3 576 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms