RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 GJD4Q96KN9 370 aaPredicted RBP10.91□□□□□ -0.66
TUBB1-201ENST00000217133 FOXP1Q9H334 677 aaPredicted RBP10.91□□□□□ -0.66
TUBB1-201ENST00000217133 VIPAS39Q9H9C1 493 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 ABHD10Q9NUJ1 306 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 EPN1Q9Y6I3 576 aaPredicted RBP10.91□□□□□ -0.66
TUBB1-201ENST00000217133 SLIT2O94813 1529 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 A0A087WUV0 522 aaPredicted RBP10.91□□□□□ -0.66
TUBB1-201ENST00000217133 IPO7O95373 1038 aaKnown RBP10.91□□□□□ -0.66
TUBB1-201ENST00000217133 GUCY2CP25092 1073 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 USP14P54578 494 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 EIF5P55010 431 aaKnown RBP10.91□□□□□ -0.66
TUBB1-201ENST00000217133 SPAG1Q07617 926 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 CT47A1Q5JQC4 288 aaPredicted RBP10.91□□□□□ -0.66
TUBB1-201ENST00000217133 KIAA1328Q86T90 577 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 TADA2BQ86TJ2 420 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 NKX2-3Q8TAU0 364 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 EPSTI1Q96J88 318 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 ZKSCAN3Q9BRR0 538 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 NBPF3Q9H094 633 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 FAM217BQ9NTX9 383 aaPredicted RBP10.91□□□□□ -0.66
TUBB1-201ENST00000217133 SAR1BQ9Y6B6 198 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 STK36Q9NRP7 1315 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 EBAG9O00559 213 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 ADD2P35612 726 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 IFIT5Q13325 482 aaKnown RBP10.9□□□□□ -0.66
TUBB1-201ENST00000217133 KRT31Q15323 416 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 APTXQ7Z2E3 356 aaKnown RBP10.9□□□□□ -0.66
TUBB1-201ENST00000217133 PIGBQ92521 554 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 YY1AP1Q9H869 796 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 HDAC6Q9UBN7 1215 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 SEMA3EO15041 775 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 DEXIO95424 95 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 PBX1P40424 430 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 ARHGAP25P42331 645 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 CTDSPL2Q05D32 466 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 VPS72Q15906 364 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 CCDC122Q5T0U0 273 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 CDKAL1Q5VV42 579 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 SGMS1Q86VZ5 419 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 GPATCH11Q8N954 259 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 PAGE5Q96GU1 130 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 RABEP2Q9H5N1 569 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 TRIM10Q9UDY6 481 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 ZNF532Q9HCE3 1301 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 CCDC196A0A1B0GTZ2 297 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 GOLGA6CA6NDK9 693 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 A1BGP04217 495 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 GOLGA6DP0CG33 693 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 XBP1P17861 261 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 CCT5P48643 541 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 LIG3P49916 1009 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 UBXN1Q04323 297 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 CKAP4Q07065 602 aaKnown RBP10.9□□□□□ -0.66
TUBB1-201ENST00000217133 CUL4BQ13620 913 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 TRIM14Q14142 442 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 E2F4Q16254 413 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 GSDMAQ96QA5 445 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 GOLGA6AQ9NYA3 693 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 ZSWIM5Q9P217 1185 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 HPCAL4Q9UM19 191 aa10.9□□□□□ -0.66
TUBB1-201ENST00000217133 SHTN1A0MZ66 631 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 NBPF26B4DH59 902 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 ERLIN2O94905 339 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 LIFRP42702 1097 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 COPB1P53618 953 aaKnown RBP10.89□□□□□ -0.67
TUBB1-201ENST00000217133 WTAPQ15007 396 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 TTF1Q15361 905 aaPredicted RBP10.89□□□□□ -0.67
TUBB1-201ENST00000217133 NBPF14Q5TI25 921 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 NBPF10Q6P3W6 841 aaKnown RBP10.89□□□□□ -0.67
TUBB1-201ENST00000217133 NBPF15Q8N660 670 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 OXER1Q8TDS5 423 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 COG1Q8WTW3 980 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 TMOD3Q9NYL9 352 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 SRGAP2O75044 1071 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 NDUFA10O95299 355 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 SYF2O95926 243 aaKnown RBP10.89□□□□□ -0.67
TUBB1-201ENST00000217133 GGCXP38435 758 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 MCAMP43121 646 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 MFSD6Q6ZSS7 791 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 SYMPKQ92797 1274 aaKnown RBP10.89□□□□□ -0.67
TUBB1-201ENST00000217133 MMS19Q96T76 1030 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 CHP1Q99653 195 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 BLZF1Q9H2G9 400 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 HAUS4Q9H6D7 363 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 CNNM1Q9NRU3 951 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 ITIH6Q6UXX5 1313 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 LDHAL6AQ6ZMR3 332 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 MMS22LQ6ZRQ5 1243 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 GSPT2Q8IYD1 628 aaKnown RBP10.89□□□□□ -0.67
TUBB1-201ENST00000217133 SPATA20Q8TB22 786 aa10.89□□□□□ -0.67
TUBB1-201ENST00000217133 GOLGA6BA6NDN3 693 aa10.88□□□□□ -0.67
TUBB1-201ENST00000217133 AARSP49588 968 aaKnown RBP eCLIP10.88□□□□□ -0.67
TUBB1-201ENST00000217133 AMPD2Q01433 879 aa10.88□□□□□ -0.67
TUBB1-201ENST00000217133 MYCBPQ99417 103 aaPredicted RBP10.88□□□□□ -0.67
TUBB1-201ENST00000217133 AATFQ9NY61 560 aaKnown RBP eCLIP10.88□□□□□ -0.67
TUBB1-201ENST00000217133 LUC7L2Q9Y383 392 aaKnown RBP10.88□□□□□ -0.67
TUBB1-201ENST00000217133 COL22A1Q8NFW1 1626 aaPredicted RBP10.88□□□□□ -0.67
TUBB1-201ENST00000217133 KCNJ18B7U540 433 aa10.88□□□□□ -0.67
TUBB1-201ENST00000217133 PPP1R3GB7ZBB8 358 aa10.88□□□□□ -0.67
TUBB1-201ENST00000217133 TDO2P48775 406 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms