RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Tpd52l1O54818 204 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 U2af2P26369 475 aaKnown RBP8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Brip1Q5SXJ3 1174 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Cnot7Q60809 285 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Yeats4Q9CR11 227 aaKnown RBP8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 PdcQ9QW08 244 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Clic4Q9QYB1 253 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Dhx8A2A4P0 1244 aaKnown RBP8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Cyp26c1B2RXA7 518 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 MthfslL7N466 203 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Ppef2O35385 757 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 PtmaP26350 111 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 CtshP49935 333 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Sptlc2P97363 560 aaKnown RBP8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 D630036H23RikQ3UQD6 204 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Lgr6Q3UVD5 967 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Rhpn1Q61085 643 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Wdr24Q8CFJ9 790 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Trex1Q91XB0 314 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Galntl5Q9D4M9 431 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Stk32bQ9JJX8 414 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Acot3Q9QYR7 432 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Ktn1Q61595 1327 aaKnown RBP8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Col2a1P28481 1487 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Mx1P09922 631 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Lrch1P62046 709 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Oog3Q3UWY1 500 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Grm4Q68EF4 912 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Dnaaf2Q8BPI1 814 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Gpsm2Q8VDU0 679 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Trim11Q99PQ2 467 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 GrapQ9CX99 217 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Sh3bgrQ9WUZ7 214 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Fam205a1D3YZF6 1314 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Cfap58B2RW38 873 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Syce3B5KM66 88 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Dcdc2bF7BCK0 340 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Copb2O55029 905 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Eif5P59325 429 aaKnown RBP8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Kctd1Q5M956 257 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Paxip1Q6NZQ4 1056 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Ube2oQ6ZPJ3 1288 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Nat10Q8K224 1024 aaKnown RBP8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Shtn1Q8K2Q9 631 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Trim29Q8R2Q0 587 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Ascc2Q91WR3 749 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Etnk1Q9D4V0 363 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Igsf9bE9PZ19 1328 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Fam89aQ14BJ1 175 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Stxbp2Q64324 593 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Epha10Q8BYG9 1007 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 RadxQ8C779 850 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Ndufb9Q9CQJ8 179 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Tjap1Q9DCD5 539 aa8.6□□□□□ -1.03
Usp40-204ENSMUST00000187758 Sema3fO88632 785 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Gtf2f1Q3THK3 508 aaKnown RBP8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Gpr162Q3UN16 588 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Hip1rQ9JKY5 1068 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Gm21969J3QJZ1 289 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 CebpaP53566 359 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Swap70Q6A028 585 aaKnown RBP8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Scaf8Q6DID3 1268 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Zscan22Q8BGS5 496 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Larp6Q8BN59 492 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Inpp5bQ8K337 993 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Glis2Q8VDL9 521 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Cd2apQ9JLQ0 637 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Txnrd2Q9JLT4 524 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Wdr33Q8K4P0 1330 aaKnown RBP8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Gm9992B2RWK3 458 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Ildr2B5TVM2 661 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Api5O35841 504 aaKnown RBP8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 MarcksP26645 309 aaKnown RBP8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Mars2Q499X9 586 aaKnown RBP8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Cyp4x1Q6A152 507 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Adgrg6Q6F3F9 1165 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Unc93aQ710D3 458 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Q8K2W9 541 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Hnrnpul1Q8VDM6 859 aaKnown RBP8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Snapc2Q91XA5 359 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 4931400O07RikQ9D4M5 137 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Prkab1Q9R078 270 aa8.59□□□□□ -1.03
Usp40-204ENSMUST00000187758 Pagr1bF6V0H0 108 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Akap2O54931 893 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Epha2Q03145 977 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Ttbk2Q3UVR3 1243 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Arhgef2Q60875 985 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Mapk4Q6P5G0 583 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Senp6Q6P7W0 1132 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 IqcgQ80W32 419 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Prkag3Q8BGM7 489 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Tspyl4Q8VD63 406 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Pagr1aQ99L02 253 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Psmd10Q9Z2X2 231 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 1700113H08RikE9Q9Q5 327 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Gna11P21278 359 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Atp1a3Q6PIC6 1013 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Ms4a5Q810P8 197 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Scfd2Q8BTY8 684 aa8.58□□□□□ -1.04
Usp40-204ENSMUST00000187758 Ubxn8Q9QZ49 277 aa8.58□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms