RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Acsl3Q9CZW4 720 aaKnown RBP10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Npc1l1Q6T3U4 1333 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Gm5936A2BG95 728 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Gm5640A3KG49 728 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Csrnp1P59054 583 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ric8aQ3TIR3 530 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Mtss1lQ6P9S0 715 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 PodnQ7TQ62 611 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Rab11fip4Q8BQP8 635 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Cbwd1Q8VEH6 393 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Mphosph6Q9D1Q1 161 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Tex9Q9D845 387 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 RabggtaQ9JHK4 567 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Vmn2r68L7N2B3 851 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Xbp1O35426 267 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 XpcP51612 930 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Gngt1Q61012 74 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ccdc15Q8C9M2 810 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Spdl1Q923A2 608 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Tex14Q7M6U3 1450 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Pls1Q3V0K9 630 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Gm12185Q5NCB2 835 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Cdc23Q8BGZ4 597 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Vps37bQ8R0J7 285 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Cfap74Q3UY96 1578 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Top2bQ64511 1612 aa10.06□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Plekha5E9Q6H8 1269 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 ZfaP23607 742 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 RcvrnP34057 202 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 ClgnP52194 611 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Cct6aP80317 531 aaKnown RBP10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ttll12Q3UDE2 639 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Slc10a4Q3UEZ8 437 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Vps54Q5SPW0 977 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ccdc92bQ5SUE3 299 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Cracr2bQ80ZJ8 394 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Lonp2Q9DBN5 852 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Birc2Q62210 612 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Sgsm2Q80U12 1005 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Rbbp5Q8BX09 538 aaKnown RBP10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Efcab8Q8C9R9 203 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Gimap7Q8R379 293 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Tulp1Q9Z273 543 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Bach2P97303 839 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Wdr44Q6NVE8 915 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Zfyve19Q9DAZ9 389 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Capn12Q9ER56 720 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 AU019823E9PUQ3 292 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Tnni3P48787 211 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ptpn14Q62130 1189 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ankrd45Q810N6 248 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Znf76Q8BMU0 568 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 IarsQ8BU30 1262 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Rint1Q8BZ36 792 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Plcg2Q8CIH5 1265 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Stag1Q9D3E6 1258 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Nsd3Q6P2L6 1439 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Abcc4E9Q236 1325 aa10.05□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Dync1i2O88487 612 aaKnown RBP10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Hoxc9P09633 260 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Casp1P29452 402 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Sept2P42208 361 aaKnown RBP10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 EsrrgP62509 458 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ccdc160Q3UYG1 323 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ubn1Q4G0F8 1135 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Cnpy2Q9QXT0 182 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Gm20425E9Q035 978 aaKnown RBP10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 4933406M09RikG3XA12 479 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Casp14O89094 257 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 SrprbP47758 269 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Kpna2P52293 529 aaKnown RBP10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Slc30a9Q5IRJ6 567 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Tas2r124Q7M718 309 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ppp2r2cQ8BG02 447 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Caps2Q8BUG5 550 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 MesdQ9ERE7 224 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Dennd4bQ3U1Y4 1499 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 ChkbO55229 394 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Gucy2eP52785 1108 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 DeptorQ570Y9 409 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Nuak1Q641K5 658 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Cyp24a1Q64441 514 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Mettl5Q8K1A0 209 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Adgrl2Q8JZZ7 1487 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ulk4Q3V129 1303 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Calb1P12658 261 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Tnnc2P20801 160 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 CrklP47941 303 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Rad23aP54726 363 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 VrtnQ3SYK4 740 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Ppp2r5aQ6PD03 486 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Q80Y73 168 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Kcnv2Q8CFS6 562 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Lrrc8cQ8R502 803 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Gpr108Q91WD0 569 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Phkg2Q9DB30 406 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Plagl1Q9JLQ4 704 aa10.04□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 C1qbpO35658 278 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Timm10P62073 90 aa10.03□□□□□ -0.8
Ccdc47-201ENSMUST00000002043 Adcy8P97490 1249 aa10.03□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms