RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 ZNF589Q86UQ0 364 aaPredicted RBP20.69■□□□□ 0.9
PHGDH-227ENST00000641811 FEZ1Q99689 392 aa20.69■□□□□ 0.9
PHGDH-227ENST00000641811 NAPBQ9H115 298 aa20.69■□□□□ 0.9
PHGDH-227ENST00000641811 TAOK2Q9UL54 1235 aa20.69■□□□□ 0.9
PHGDH-227ENST00000641811 A0A1W2PRG0 241 aa20.68■□□□□ 0.9
PHGDH-227ENST00000641811 TTC22Q5TAA0 569 aa20.68■□□□□ 0.9
PHGDH-227ENST00000641811 USP17L2Q6R6M4 530 aa20.68■□□□□ 0.9
PHGDH-227ENST00000641811 TMEM179Q6ZVK1 233 aa20.68■□□□□ 0.9
PHGDH-227ENST00000641811 TICAM2Q86XR7 235 aa20.68■□□□□ 0.9
PHGDH-227ENST00000641811 CCDC17Q96LX7 622 aa20.68■□□□□ 0.9
PHGDH-227ENST00000641811 ASCC2Q9H1I8 757 aaPredicted RBP20.68■□□□□ 0.9
PHGDH-227ENST00000641811 BCRP11274 1271 aa20.67■□□□□ 0.9
PHGDH-227ENST00000641811 RASA1P20936 1047 aa20.67■□□□□ 0.9
PHGDH-227ENST00000641811 LACTBP83111 547 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-227ENST00000641811 SIAH1Q8IUQ4 282 aa20.67■□□□□ 0.9
PHGDH-227ENST00000641811 SMCR8Q8TEV9 937 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-227ENST00000641811 KIAA1683Q9H0B3 1180 aa20.67■□□□□ 0.9
PHGDH-227ENST00000641811 EFCC1Q9HA90 598 aa20.67■□□□□ 0.9
PHGDH-227ENST00000641811 ROBO3Q96MS0 1386 aa20.67■□□□□ 0.9
PHGDH-227ENST00000641811 ZSWIM8A7E2V4 1837 aa20.67■□□□□ 0.9
PHGDH-227ENST00000641811 MYH8P13535 1937 aa20.66■□□□□ 0.9
PHGDH-227ENST00000641811 PRDM1O75626 825 aa20.66■□□□□ 0.9
PHGDH-227ENST00000641811 CTGFP29279 349 aa20.66■□□□□ 0.9
PHGDH-227ENST00000641811 PABPC4Q13310 644 aaKnown RBP eCLIP20.66■□□□□ 0.99e-7■■■■□ 21.6
PHGDH-227ENST00000641811 MKNK2Q9HBH9 465 aa20.66■□□□□ 0.9
PHGDH-227ENST00000641811 PNMA3Q9UL41 463 aa20.66■□□□□ 0.9
PHGDH-227ENST00000641811 OSBPP22059 807 aa20.65■□□□□ 0.9
PHGDH-227ENST00000641811 PPARAQ07869 468 aa20.65■□□□□ 0.9
PHGDH-227ENST00000641811 PKN2Q16513 984 aaKnown RBP20.65■□□□□ 0.9
PHGDH-227ENST00000641811 CWC27Q6UX04 472 aaKnown RBP20.65■□□□□ 0.9
PHGDH-227ENST00000641811 SKAP1Q86WV1 359 aa20.65■□□□□ 0.9
PHGDH-227ENST00000641811 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.65■□□□□ 0.9
PHGDH-227ENST00000641811 DIAPH3Q9NSV4 1193 aa20.65■□□□□ 0.9
PHGDH-227ENST00000641811 CCDC171Q6TFL3 1326 aa20.64■□□□□ 0.89
PHGDH-227ENST00000641811 HOXA7P31268 230 aaPredicted RBP20.64■□□□□ 0.89
PHGDH-227ENST00000641811 USP14P54578 494 aa20.64■□□□□ 0.89
PHGDH-227ENST00000641811 IRX3P78415 501 aaPredicted RBP20.64■□□□□ 0.89
PHGDH-227ENST00000641811 ICA1Q05084 483 aa20.64■□□□□ 0.89
PHGDH-227ENST00000641811 CTDSPL2Q05D32 466 aa20.64■□□□□ 0.89
PHGDH-227ENST00000641811 KIF22Q14807 665 aa20.64■□□□□ 0.89
PHGDH-227ENST00000641811 FBXO46Q6PJ61 603 aaPredicted RBP20.64■□□□□ 0.89
PHGDH-227ENST00000641811 ANKRD13CQ8N6S4 541 aa20.64■□□□□ 0.89
PHGDH-227ENST00000641811 C12orf42Q96LP6 360 aa20.64■□□□□ 0.89
PHGDH-227ENST00000641811 P2RX7Q99572 595 aaKnown RBP20.64■□□□□ 0.89
PHGDH-227ENST00000641811 HPS5Q9UPZ3 1129 aa20.64■□□□□ 0.89
PHGDH-227ENST00000641811 CCDC85CA6NKD9 419 aa20.63■□□□□ 0.89
PHGDH-227ENST00000641811 PEX10O60683 326 aa20.63■□□□□ 0.89
PHGDH-227ENST00000641811 HSPD1P10809 573 aaKnown RBP20.63■□□□□ 0.89
PHGDH-227ENST00000641811 VCAM1P19320 739 aa20.63■□□□□ 0.89
PHGDH-227ENST00000641811 PSMC4P43686 418 aa20.63■□□□□ 0.89
PHGDH-227ENST00000641811 ATP2B2Q01814 1243 aa20.63■□□□□ 0.89
PHGDH-227ENST00000641811 ALX1Q15699 326 aa20.63■□□□□ 0.89
PHGDH-227ENST00000641811 KIAA1755Q5JYT7 1200 aa20.63■□□□□ 0.89
PHGDH-227ENST00000641811 CENPQQ7L2Z9 268 aaPredicted RBP20.63■□□□□ 0.89
PHGDH-227ENST00000641811 TRIM47Q96LD4 638 aa20.63■□□□□ 0.89
PHGDH-227ENST00000641811 INCENPQ9NQS7 918 aa20.63■□□□□ 0.89
PHGDH-227ENST00000641811 PTPN22Q9Y2R2 807 aa20.63■□□□□ 0.89
PHGDH-227ENST00000641811 TACC3Q9Y6A5 838 aa20.63■□□□□ 0.89
PHGDH-227ENST00000641811 FGAP02671 866 aa20.62■□□□□ 0.89
PHGDH-227ENST00000641811 EEF2P13639 858 aaKnown RBP20.62■□□□□ 0.89
PHGDH-227ENST00000641811 KANSL2Q9H9L4 492 aa20.62■□□□□ 0.89
PHGDH-227ENST00000641811 ARHGEF10LQ9HCE6 1279 aa20.62■□□□□ 0.89
PHGDH-227ENST00000641811 HIP1O00291 1037 aa20.61■□□□□ 0.89
PHGDH-227ENST00000641811 FMNL1O95466 1100 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-227ENST00000641811 HERVK_113P62684 666 aa20.61■□□□□ 0.89
PHGDH-227ENST00000641811 ARHGEF6Q15052 776 aa20.61■□□□□ 0.89
PHGDH-227ENST00000641811 ZNF444Q8N0Y2 327 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-227ENST00000641811 TMX2Q9Y320 296 aa20.61■□□□□ 0.89
PHGDH-227ENST00000641811 USP17L15C9J2P7 530 aa20.6■□□□□ 0.89
PHGDH-227ENST00000641811 USP17L13C9JLJ4 530 aa20.6■□□□□ 0.89
PHGDH-227ENST00000641811 USP17L11C9JVI0 530 aa20.6■□□□□ 0.89
PHGDH-227ENST00000641811 USP17L18D6R9N7 530 aa20.6■□□□□ 0.89
PHGDH-227ENST00000641811 USP17L22D6RA61 530 aa20.6■□□□□ 0.89
PHGDH-227ENST00000641811 USP17L17D6RBQ6 530 aa20.6■□□□□ 0.89
PHGDH-227ENST00000641811 USP17L19D6RCP7 530 aa20.6■□□□□ 0.89
PHGDH-227ENST00000641811 USP17L20D6RJB6 530 aa20.6■□□□□ 0.89
PHGDH-227ENST00000641811 SLC3A2P08195 630 aaKnown RBP20.6■□□□□ 0.89
PHGDH-227ENST00000641811 GCLCP48506 637 aaPredicted RBP20.6■□□□□ 0.89
PHGDH-227ENST00000641811 PDE4BQ07343 736 aa20.6■□□□□ 0.89
PHGDH-227ENST00000641811 USP17L24Q0WX57 530 aa20.6■□□□□ 0.89
PHGDH-227ENST00000641811 FAM47AQ5JRC9 791 aa20.6■□□□□ 0.89
PHGDH-227ENST00000641811 POTEEQ6S8J3 1075 aa20.6■□□□□ 0.89
PHGDH-227ENST00000641811 SPICE1Q8N0Z3 855 aa20.6■□□□□ 0.89
PHGDH-227ENST00000641811 IL25Q9H293 177 aa20.6■□□□□ 0.89
PHGDH-227ENST00000641811 RPAP3Q9H6T3 665 aaPredicted RBP20.6■□□□□ 0.89
PHGDH-227ENST00000641811 ZNF287Q9HBT7 754 aa20.6■□□□□ 0.89
PHGDH-227ENST00000641811 NEFLP07196 543 aa20.59■□□□□ 0.89
PHGDH-227ENST00000641811 MFAP1P55081 439 aaKnown RBP20.59■□□□□ 0.89
PHGDH-227ENST00000641811 FAM110CQ1W6H9 321 aa20.59■□□□□ 0.89
PHGDH-227ENST00000641811 CATSPERGQ6ZRH7 1159 aa20.59■□□□□ 0.89
PHGDH-227ENST00000641811 CCDC136Q96JN2 1154 aa20.59■□□□□ 0.89
PHGDH-227ENST00000641811 TXNRD2Q9NNW7 524 aa20.59■□□□□ 0.89
PHGDH-227ENST00000641811 ANAPC4Q9UJX5 808 aa20.59■□□□□ 0.89
PHGDH-227ENST00000641811 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.59■□□□□ 0.89
PHGDH-227ENST00000641811 PTCH2Q9Y6C5 1203 aa20.59■□□□□ 0.89
PHGDH-227ENST00000641811 GREB1LQ9C091 1923 aaPredicted RBP20.59■□□□□ 0.89
PHGDH-227ENST00000641811 IGKV6D-41A0A0C4DH26 115 aa20.58■□□□□ 0.89
PHGDH-227ENST00000641811 HAND2P61296 217 aa20.58■□□□□ 0.89
PHGDH-227ENST00000641811 SH2D4AQ9H788 454 aa20.58■□□□□ 0.89
PHGDH-227ENST00000641811 VCPKMTQ9H867 229 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms