RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 REXO1L1PQ8IX06 675 aa19.24■□□□□ 0.67
PHGDH-223ENST00000641597 ATRIPQ8WXE1 791 aa19.24■□□□□ 0.67
PHGDH-223ENST00000641597 CDC5LQ99459 802 aaKnown RBP19.24■□□□□ 0.67
PHGDH-223ENST00000641597 GTF2E1P29083 439 aaPredicted RBP19.23■□□□□ 0.67
PHGDH-223ENST00000641597 CDC25AP30304 524 aa19.23■□□□□ 0.67
PHGDH-223ENST00000641597 AKAP17AQ02040 695 aaKnown RBP19.23■□□□□ 0.67
PHGDH-223ENST00000641597 PKNOX2Q96KN3 472 aa19.23■□□□□ 0.67
PHGDH-223ENST00000641597 PHF20Q9BVI0 1012 aa19.23■□□□□ 0.67
PHGDH-223ENST00000641597 ZNF18P17022 549 aa19.23■□□□□ 0.67
PHGDH-223ENST00000641597 MECOMQ03112 1051 aa19.23■□□□□ 0.67
PHGDH-223ENST00000641597 SYCP1Q15431 976 aa19.23■□□□□ 0.67
PHGDH-223ENST00000641597 SRBD1Q8N5C6 995 aaKnown RBP19.23■□□□□ 0.67
PHGDH-223ENST00000641597 ST7Q9NRC1 585 aa19.23■□□□□ 0.67
PHGDH-223ENST00000641597 ZNF446Q9NWS9 450 aa19.23■□□□□ 0.67
PHGDH-223ENST00000641597 VWA3AA6NCI4 1184 aa19.22■□□□□ 0.67
PHGDH-223ENST00000641597 TRIM75PA6NK02 468 aa19.22■□□□□ 0.67
PHGDH-223ENST00000641597 AMIGO3Q86WK7 504 aa19.22■□□□□ 0.67
PHGDH-223ENST00000641597 TMTC2Q8N394 836 aa19.22■□□□□ 0.67
PHGDH-223ENST00000641597 RGS22Q8NE09 1264 aa19.22■□□□□ 0.67
PHGDH-223ENST00000641597 ERO1AQ96HE7 468 aa19.22■□□□□ 0.67
PHGDH-223ENST00000641597 RNF26Q9BY78 433 aaPredicted RBP19.22■□□□□ 0.67
PHGDH-223ENST00000641597 BLZF1Q9H2G9 400 aa19.22■□□□□ 0.67
PHGDH-223ENST00000641597 CGNQ9P2M7 1197 aaKnown RBP19.22■□□□□ 0.67
PHGDH-223ENST00000641597 MTMR7Q9Y216 660 aa19.22■□□□□ 0.67
PHGDH-223ENST00000641597 ETF1P62495 437 aaKnown RBP19.22■□□□□ 0.67
PHGDH-223ENST00000641597 DPYDQ12882 1025 aa19.22■□□□□ 0.67
PHGDH-223ENST00000641597 CCDC93Q567U6 631 aa19.22■□□□□ 0.67
PHGDH-223ENST00000641597 FAM182BQ5T319 152 aa19.22■□□□□ 0.67
PHGDH-223ENST00000641597 TC2NQ8N9U0 490 aa19.22■□□□□ 0.67
PHGDH-223ENST00000641597 CPLX3Q8WVH0 158 aa19.22■□□□□ 0.67
PHGDH-223ENST00000641597 IRX2Q9BZI1 471 aaPredicted RBP19.22■□□□□ 0.67
PHGDH-223ENST00000641597 L2HGDHQ9H9P8 463 aa19.22■□□□□ 0.67
PHGDH-223ENST00000641597 EP400Q96L91 3159 aa19.22■□□□□ 0.67
PHGDH-223ENST00000641597 CBFA2T2O43439 604 aa19.21■□□□□ 0.67
PHGDH-223ENST00000641597 NT5DC1Q5TFE4 455 aa19.21■□□□□ 0.67
PHGDH-223ENST00000641597 CATIPQ7Z7H3 387 aa19.21■□□□□ 0.67
PHGDH-223ENST00000641597 WDR24Q96S15 920 aa19.21■□□□□ 0.67
PHGDH-223ENST00000641597 DDX41Q9UJV9 622 aaKnown RBP19.21■□□□□ 0.67
PHGDH-223ENST00000641597 ANAPC4Q9UJX5 808 aa19.21■□□□□ 0.67
PHGDH-223ENST00000641597 ROBO1Q9Y6N7 1651 aa19.21■□□□□ 0.67
PHGDH-223ENST00000641597 KRT2P35908 639 aa19.21■□□□□ 0.67
PHGDH-223ENST00000641597 CAVIN4Q5BKX8 364 aa19.21■□□□□ 0.67
PHGDH-223ENST00000641597 NSUN4Q96CB9 384 aaKnown RBP19.21■□□□□ 0.67
PHGDH-223ENST00000641597 DUOX1Q9NRD9 1551 aa19.2■□□□□ 0.66
PHGDH-223ENST00000641597 PAGE5Q96GU1 130 aa19.2■□□□□ 0.66
PHGDH-223ENST00000641597 GNL3LQ9NVN8 582 aaKnown RBP19.2■□□□□ 0.66
PHGDH-223ENST00000641597 BSDC1Q9NW68 430 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-223ENST00000641597 PPP2R2CQ9Y2T4 447 aa19.2■□□□□ 0.66
PHGDH-223ENST00000641597 RTL9Q8NET4 1388 aa19.2■□□□□ 0.66
PHGDH-223ENST00000641597 URI1O94763 535 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-223ENST00000641597 TBX2Q13207 712 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-223ENST00000641597 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.2■□□□□ 0.661e-6■□□□□ 10.9
PHGDH-223ENST00000641597 PTGDRQ13258 359 aa19.19■□□□□ 0.66
PHGDH-223ENST00000641597 IL17AQ16552 155 aa19.19■□□□□ 0.66
PHGDH-223ENST00000641597 PIK3AP1Q6ZUJ8 805 aa19.19■□□□□ 0.66
PHGDH-223ENST00000641597 RASGRP4Q8TDF6 673 aa19.19■□□□□ 0.66
PHGDH-223ENST00000641597 BAG1Q99933 345 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-223ENST00000641597 DCP1AQ9NPI6 582 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-223ENST00000641597 DMTNQ08495 405 aa19.19■□□□□ 0.66
PHGDH-223ENST00000641597 UBE4AQ14139 1066 aa19.19■□□□□ 0.66
PHGDH-223ENST00000641597 RASGRP2Q7LDG7 609 aa19.19■□□□□ 0.66
PHGDH-223ENST00000641597 IQCA1Q86XH1 822 aa19.19■□□□□ 0.66
PHGDH-223ENST00000641597 MLKLQ8NB16 471 aa19.19■□□□□ 0.66
PHGDH-223ENST00000641597 ZNF397Q8NF99 534 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-223ENST00000641597 CNTNAP5Q8WYK1 1306 aa19.18■□□□□ 0.66
PHGDH-223ENST00000641597 PRPF3O43395 683 aaKnown RBP19.18■□□□□ 0.66
PHGDH-223ENST00000641597 USP17L8P0C7I0 530 aa19.18■□□□□ 0.66
PHGDH-223ENST00000641597 MCM7P33993 719 aa19.18■□□□□ 0.66
PHGDH-223ENST00000641597 KARSQ15046 597 aaKnown RBP19.18■□□□□ 0.66
PHGDH-223ENST00000641597 SPECC1LQ69YQ0 1117 aa19.18■□□□□ 0.66
PHGDH-223ENST00000641597 TMTC3Q6ZXV5 915 aa19.18■□□□□ 0.66
PHGDH-223ENST00000641597 ZNF579Q8NAF0 562 aaKnown RBP19.18■□□□□ 0.66
PHGDH-223ENST00000641597 ENOX1Q8TC92 643 aaKnown RBP19.18■□□□□ 0.66
PHGDH-223ENST00000641597 GPKOWQ92917 476 aaPredicted RBP eCLIP19.18■□□□□ 0.66
PHGDH-223ENST00000641597 TNFRSF25Q93038 417 aa19.18■□□□□ 0.66
PHGDH-223ENST00000641597 GPR101Q96P66 508 aaPredicted RBP19.18■□□□□ 0.66
PHGDH-223ENST00000641597 MAPK8IP1Q9UQF2 711 aa19.18■□□□□ 0.66
PHGDH-223ENST00000641597 WNK3Q9BYP7 1800 aa19.18■□□□□ 0.66
PHGDH-223ENST00000641597 FAM98CQ17RN3 349 aaKnown RBP19.18■□□□□ 0.66
PHGDH-223ENST00000641597 APTXQ7Z2E3 356 aaKnown RBP19.18■□□□□ 0.66
PHGDH-223ENST00000641597 SPATA20Q8TB22 786 aa19.18■□□□□ 0.66
PHGDH-223ENST00000641597 OGFRQ9NZT2 677 aa19.18■□□□□ 0.66
PHGDH-223ENST00000641597 HOOK1Q9UJC3 728 aaKnown RBP19.18■□□□□ 0.66
PHGDH-223ENST00000641597 SOWAHDA6NJG2 315 aa19.17■□□□□ 0.66
PHGDH-223ENST00000641597 NRDCO43847 1150 aa19.17■□□□□ 0.66
PHGDH-223ENST00000641597 PLCD1P51178 756 aa19.17■□□□□ 0.66
PHGDH-223ENST00000641597 DYNLL2Q96FJ2 89 aa19.17■□□□□ 0.66
PHGDH-223ENST00000641597 MTRQ99707 1265 aa19.17■□□□□ 0.66
PHGDH-223ENST00000641597 ZNF652Q9Y2D9 606 aa19.17■□□□□ 0.66
PHGDH-223ENST00000641597 SF3B3Q15393 1217 aaKnown RBP19.17■□□□□ 0.66
PHGDH-223ENST00000641597 ARHGAP29Q52LW3 1261 aa19.17■□□□□ 0.66
PHGDH-223ENST00000641597 TTC38Q5R3I4 469 aa19.17■□□□□ 0.66
PHGDH-223ENST00000641597 CREBRFQ8IUR6 639 aa19.17■□□□□ 0.66
PHGDH-223ENST00000641597 FEZ1Q99689 392 aa19.17■□□□□ 0.66
PHGDH-223ENST00000641597 BRIP1Q9BX63 1249 aa19.17■□□□□ 0.66
PHGDH-223ENST00000641597 CARD6Q9BX69 1037 aa19.17■□□□□ 0.66
PHGDH-223ENST00000641597 KIF2AO00139 706 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-223ENST00000641597 KCNJ6P48051 423 aa19.16■□□□□ 0.66
PHGDH-223ENST00000641597 NR1I3Q14994 352 aa19.16■□□□□ 0.66
PHGDH-223ENST00000641597 GRIK5Q16478 980 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms