RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 C12orf60Q5U649 245 aa20.13■□□□□ 0.81
CACNA1A-259ENST00000638114 ACER1Q8TDN7 264 aa20.13■□□□□ 0.81
CACNA1A-259ENST00000638114 OSBP2Q969R2 916 aa20.13■□□□□ 0.81
CACNA1A-259ENST00000638114 STRBPQ96SI9 672 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-259ENST00000638114 P2RX7Q99572 595 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-259ENST00000638114 KIAA1683Q9H0B3 1180 aa20.13■□□□□ 0.81
CACNA1A-259ENST00000638114 USP14P54578 494 aa20.12■□□□□ 0.81
CACNA1A-259ENST00000638114 HERVK_113P62684 666 aa20.12■□□□□ 0.81
CACNA1A-259ENST00000638114 COA7Q96BR5 231 aa20.12■□□□□ 0.81
CACNA1A-259ENST00000638114 C12orf42Q96LP6 360 aa20.12■□□□□ 0.81
CACNA1A-259ENST00000638114 TAOK2Q9UL54 1235 aa20.12■□□□□ 0.81
CACNA1A-259ENST00000638114 SMIM22K7EJ46 135 aa20.11■□□□□ 0.81
CACNA1A-259ENST00000638114 FLT3LGP49771 235 aa20.11■□□□□ 0.81
CACNA1A-259ENST00000638114 CTR9Q6PD62 1173 aa20.11■□□□□ 0.81
CACNA1A-259ENST00000638114 TMEM179Q6ZVK1 233 aa20.11■□□□□ 0.81
CACNA1A-259ENST00000638114 FSD1Q9BTV5 496 aa20.11■□□□□ 0.81
CACNA1A-259ENST00000638114 ARPP21Q9UBL0 812 aaPredicted RBP20.11■□□□□ 0.81
CACNA1A-259ENST00000638114 MORF4L1Q9UBU8 362 aa20.11■□□□□ 0.81
CACNA1A-259ENST00000638114 BIN2Q9UBW5 565 aaPredicted RBP20.11■□□□□ 0.81
CACNA1A-259ENST00000638114 SALL3Q9BXA9 1300 aa20.1■□□□□ 0.81
CACNA1A-259ENST00000638114 GPAA1O43292 621 aa20.1■□□□□ 0.81
CACNA1A-259ENST00000638114 EN2P19622 333 aaPredicted RBP20.1■□□□□ 0.81
CACNA1A-259ENST00000638114 CDK8P49336 464 aa20.1■□□□□ 0.81
CACNA1A-259ENST00000638114 PDE4DIPQ5VU43 2346 aa20.1■□□□□ 0.81
CACNA1A-259ENST00000638114 GSG1L2A8MUP6 293 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 USP17L15C9J2P7 530 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 USP17L13C9JLJ4 530 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 USP17L11C9JVI0 530 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 USP17L18D6R9N7 530 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 USP17L22D6RA61 530 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 USP17L17D6RBQ6 530 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 USP17L19D6RCP7 530 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 USP17L20D6RJB6 530 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 M0R2C6 588 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 ADCY3O60266 1144 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 AKR1B1P15121 316 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 VCAM1P19320 739 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 USP17L24Q0WX57 530 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 C16orf86Q6ZW13 317 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 SLAIN1Q8ND83 568 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 EXOC6Q8TAG9 804 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 CCDC17Q96LX7 622 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 DOCK3Q8IZD9 2030 aa20.09■□□□□ 0.81
CACNA1A-259ENST00000638114 PEX10O60683 326 aa20.08■□□□□ 0.81
CACNA1A-259ENST00000638114 GNAT2P19087 354 aa20.08■□□□□ 0.81
CACNA1A-259ENST00000638114 MTFR1Q15390 333 aa20.08■□□□□ 0.81
CACNA1A-259ENST00000638114 GIMAP6Q6P9H5 292 aa20.08■□□□□ 0.81
CACNA1A-259ENST00000638114 GPRC5AQ8NFJ5 357 aa20.08■□□□□ 0.81
CACNA1A-259ENST00000638114 GTF3C2Q8WUA4 911 aaPredicted RBP20.08■□□□□ 0.81
CACNA1A-259ENST00000638114 PAGR1Q9BTK6 254 aa20.08■□□□□ 0.81
CACNA1A-259ENST00000638114 RWDD1Q9H446 243 aaPredicted RBP20.08■□□□□ 0.81
CACNA1A-259ENST00000638114 TXNRD2Q9NNW7 524 aa20.08■□□□□ 0.81
CACNA1A-259ENST00000638114 A0A1W2PRG0 241 aa20.07■□□□□ 0.8
CACNA1A-259ENST00000638114 APPP05067 770 aa20.07■□□□□ 0.8
CACNA1A-259ENST00000638114 TDO2P48775 406 aa20.07■□□□□ 0.8
CACNA1A-259ENST00000638114 UBXN2AP68543 259 aa20.07■□□□□ 0.8
CACNA1A-259ENST00000638114 IRF5Q13568 498 aa20.07■□□□□ 0.8
CACNA1A-259ENST00000638114 CLEC10AQ8IUN9 316 aa20.07■□□□□ 0.8
CACNA1A-259ENST00000638114 RPAP3Q9H6T3 665 aaPredicted RBP20.07■□□□□ 0.8
CACNA1A-259ENST00000638114 ARHGEF10LQ9HCE6 1279 aa20.07■□□□□ 0.8
CACNA1A-259ENST00000638114 RBPJLQ9UBG7 517 aa20.07■□□□□ 0.8
CACNA1A-259ENST00000638114 SUPT16HQ9Y5B9 1047 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-259ENST00000638114 MINDY4BA8MYZ0 360 aa20.06■□□□□ 0.8
CACNA1A-259ENST00000638114 ELNP15502 786 aa20.06■□□□□ 0.8
CACNA1A-259ENST00000638114 PDE1AP54750 535 aa20.06■□□□□ 0.8
CACNA1A-259ENST00000638114 ERVK-9P63128 1117 aa20.06■□□□□ 0.8
CACNA1A-259ENST00000638114 ERVK-24P63145 666 aa20.06■□□□□ 0.8
CACNA1A-259ENST00000638114 ICA1Q05084 483 aa20.06■□□□□ 0.8
CACNA1A-259ENST00000638114 SBK1Q52WX2 424 aa20.06■□□□□ 0.8
CACNA1A-259ENST00000638114 CATSPERGQ6ZRH7 1159 aa20.06■□□□□ 0.8
CACNA1A-259ENST00000638114 STK11IPQ8N1F8 1099 aa20.06■□□□□ 0.8
CACNA1A-259ENST00000638114 SEC62Q99442 399 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-259ENST00000638114 LNPKQ9C0E8 428 aa20.06■□□□□ 0.8
CACNA1A-259ENST00000638114 EPB41L4AQ9HCS5 686 aaPredicted RBP20.06■□□□□ 0.8
CACNA1A-259ENST00000638114 STAP2Q9UGK3 403 aa20.06■□□□□ 0.8
CACNA1A-259ENST00000638114 BRCA2P51587 3418 aa20.05■□□□□ 0.8
CACNA1A-259ENST00000638114 CCL5P13501 91 aa20.05■□□□□ 0.8
CACNA1A-259ENST00000638114 ZMYM1Q5SVZ6 1142 aa20.05■□□□□ 0.8
CACNA1A-259ENST00000638114 B4GALNT3Q6L9W6 998 aa20.05■□□□□ 0.8
CACNA1A-259ENST00000638114 CCAR1Q8IX12 1150 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-259ENST00000638114 PXYLP1Q8TE99 480 aa20.05■□□□□ 0.8
CACNA1A-259ENST00000638114 SMC5Q8IY18 1101 aa20.04■□□□□ 0.8
CACNA1A-259ENST00000638114 TANGO6Q9C0B7 1094 aa20.04■□□□□ 0.8
CACNA1A-259ENST00000638114 SH2D4AQ9H788 454 aa20.04■□□□□ 0.8
CACNA1A-259ENST00000638114 PATL2C9JE40 543 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-259ENST00000638114 IGHDP01880 384 aa20.03■□□□□ 0.8
CACNA1A-259ENST00000638114 INHAP05111 366 aa20.03■□□□□ 0.8
CACNA1A-259ENST00000638114 MAPK4P31152 587 aa20.03■□□□□ 0.8
CACNA1A-259ENST00000638114 ATP2B2Q01814 1243 aa20.03■□□□□ 0.8
CACNA1A-259ENST00000638114 Q3C1V9 767 aa20.03■□□□□ 0.8
CACNA1A-259ENST00000638114 POTEEQ6S8J3 1075 aa20.03■□□□□ 0.8
CACNA1A-259ENST00000638114 IFNL3Q8IZI9 196 aa20.03■□□□□ 0.8
CACNA1A-259ENST00000638114 EVI5LQ96CN4 794 aa20.03■□□□□ 0.8
CACNA1A-259ENST00000638114 NACAP1Q9BZK3 213 aa20.03■□□□□ 0.8
CACNA1A-259ENST00000638114 RNF208Q9H0X6 261 aa20.03■□□□□ 0.8
CACNA1A-259ENST00000638114 MKNK2Q9HBH9 465 aa20.03■□□□□ 0.8
CACNA1A-259ENST00000638114 CWC22Q9HCG8 908 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-259ENST00000638114 GJD2Q9UKL4 321 aa20.03■□□□□ 0.8
CACNA1A-259ENST00000638114 TMX2Q9Y320 296 aa20.03■□□□□ 0.8
CACNA1A-259ENST00000638114 RABGAP1Q9Y3P9 1069 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms