RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 EPB41L4AQ9HCS5 686 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-249ENST00000637777 SMIM22K7EJ46 135 aa17.19■□□□□ 0.34
CACNA1A-249ENST00000637777 AKR1B1P15121 316 aa17.19■□□□□ 0.34
CACNA1A-249ENST00000637777 LACTBP83111 547 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-249ENST00000637777 ICA1Q05084 483 aa17.19■□□□□ 0.34
CACNA1A-249ENST00000637777 NMIQ13287 307 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-249ENST00000637777 SH3D19Q5HYK7 790 aa17.19■□□□□ 0.34
CACNA1A-249ENST00000637777 C17orf99Q6UX52 265 aa17.19■□□□□ 0.34
CACNA1A-249ENST00000637777 IFNL3Q8IZI9 196 aa17.19■□□□□ 0.34
CACNA1A-249ENST00000637777 CCDC17Q96LX7 622 aa17.19■□□□□ 0.34
CACNA1A-249ENST00000637777 FAM227BQ96M60 508 aa17.19■□□□□ 0.34
CACNA1A-249ENST00000637777 OSBPL3Q9H4L5 887 aa17.19■□□□□ 0.34
CACNA1A-249ENST00000637777 ARHGEF10LQ9HCE6 1279 aa17.19■□□□□ 0.34
CACNA1A-249ENST00000637777 HELLSQ9NRZ9 838 aa17.19■□□□□ 0.34
CACNA1A-249ENST00000637777 TAOK2Q9UL54 1235 aa17.19■□□□□ 0.34
CACNA1A-249ENST00000637777 ZSWIM8A7E2V4 1837 aa17.19■□□□□ 0.34
CACNA1A-249ENST00000637777 A0A0D9SFI3 127 aa17.18■□□□□ 0.34
CACNA1A-249ENST00000637777 PSMC4P43686 418 aa17.18■□□□□ 0.34
CACNA1A-249ENST00000637777 MCMDC2Q4G0Z9 681 aa17.18■□□□□ 0.34
CACNA1A-249ENST00000637777 SBK1Q52WX2 424 aa17.18■□□□□ 0.34
CACNA1A-249ENST00000637777 ANKRD13CQ8N6S4 541 aa17.18■□□□□ 0.34
CACNA1A-249ENST00000637777 ACER1Q8TDN7 264 aa17.18■□□□□ 0.34
CACNA1A-249ENST00000637777 ARHGAP39Q9C0H5 1083 aa17.18■□□□□ 0.34
CACNA1A-249ENST00000637777 ASCC2Q9H1I8 757 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-249ENST00000637777 SH2D4AQ9H788 454 aa17.18■□□□□ 0.34
CACNA1A-249ENST00000637777 HPS5Q9UPZ3 1129 aa17.18■□□□□ 0.34
CACNA1A-249ENST00000637777 MFAP1P55081 439 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-249ENST00000637777 PDE4BQ07343 736 aa17.17■□□□□ 0.34
CACNA1A-249ENST00000637777 CLEC10AQ8IUN9 316 aa17.17■□□□□ 0.34
CACNA1A-249ENST00000637777 ZNF444Q8N0Y2 327 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-249ENST00000637777 ADGRA2Q96PE1 1338 aa17.17■□□□□ 0.34
CACNA1A-249ENST00000637777 HIP1O00291 1037 aa17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 PRDM1O75626 825 aa17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 SDSP20132 328 aa17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 PDE4AP27815 886 aa17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 HOXD10P28358 340 aa17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 GUCY1A2P33402 732 aa17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 GCLCP48506 637 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 FCGRTP55899 365 aa17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 CWC27Q6UX04 472 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 CCAR1Q8IX12 1150 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 KIAA1683Q9H0B3 1180 aa17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 CWC22Q9HCG8 908 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 TOMM22Q9NS69 142 aa17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 EMILIN3Q9NT22 766 aa17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 PTPN22Q9Y2R2 807 aa17.16■□□□□ 0.34
CACNA1A-249ENST00000637777 BCRP11274 1271 aa17.15■□□□□ 0.34
CACNA1A-249ENST00000637777 PPARAQ07869 468 aa17.15■□□□□ 0.34
CACNA1A-249ENST00000637777 VPS53Q5VIR6 699 aa17.15■□□□□ 0.34
CACNA1A-249ENST00000637777 PAGR1Q9BTK6 254 aa17.15■□□□□ 0.34
CACNA1A-249ENST00000637777 TANGO6Q9C0B7 1094 aa17.15■□□□□ 0.34
CACNA1A-249ENST00000637777 MGAMO43451 1857 aa17.15■□□□□ 0.34
CACNA1A-249ENST00000637777 CCDC171Q6TFL3 1326 aa17.15■□□□□ 0.34
CACNA1A-249ENST00000637777 ROBO3Q96MS0 1386 aa17.15■□□□□ 0.34
CACNA1A-249ENST00000637777 USP17L15C9J2P7 530 aa17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 USP17L13C9JLJ4 530 aa17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 USP17L11C9JVI0 530 aa17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 USP17L18D6R9N7 530 aa17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 USP17L22D6RA61 530 aa17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 USP17L17D6RBQ6 530 aa17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 USP17L19D6RCP7 530 aa17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 USP17L20D6RJB6 530 aa17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 TNPO2O14787 897 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 VCAM1P19320 739 aa17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 USP17L24Q0WX57 530 aa17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 TTC22Q5TAA0 569 aa17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 TICAM2Q86XR7 235 aa17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 RAET1EQ8TD07 263 aa17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 RPAP3Q9H6T3 665 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 KANSL2Q9H9L4 492 aa17.14■□□□□ 0.33
CACNA1A-249ENST00000637777 GNRH1P01148 92 aa17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 CENPBP07199 599 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 TSPY3P0CV98 308 aa17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 TSPY8P0CW00 308 aa17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 RASA1P20936 1047 aa17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 HOXA7P31268 230 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 HERVK_113P62684 666 aa17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 CAP1Q01518 475 aa17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 CTDSPL2Q05D32 466 aa17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 FAM110CQ1W6H9 321 aa17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 SLC9C1Q4G0N8 1177 aa17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 ZNF589Q86UQ0 364 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 SPICE1Q8N0Z3 855 aa17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 TRIM47Q96LD4 638 aa17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 P2RX7Q99572 595 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 GOPCQ9HD26 462 aa17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 ISY1Q9ULR0 285 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 PTCH2Q9Y6C5 1203 aa17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 MYPNQ86TC9 1320 aa17.13■□□□□ 0.33
CACNA1A-249ENST00000637777 A0A1W2PRG0 241 aa17.12■□□□□ 0.33
CACNA1A-249ENST00000637777 EEF2P13639 858 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-249ENST00000637777 SOX10P56693 466 aa17.12■□□□□ 0.33
CACNA1A-249ENST00000637777 CENPQQ7L2Z9 268 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-249ENST00000637777 GTF3C2Q8WUA4 911 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-249ENST00000637777 COA7Q96BR5 231 aa17.12■□□□□ 0.33
CACNA1A-249ENST00000637777 CCDC136Q96JN2 1154 aa17.12■□□□□ 0.33
CACNA1A-249ENST00000637777 C12orf42Q96LP6 360 aa17.12■□□□□ 0.33
CACNA1A-249ENST00000637777 MYH4Q9Y623 1939 aa17.11■□□□□ 0.33
CACNA1A-249ENST00000637777 MYCP01106 439 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms