RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SH3TC2Q8TF17 1288 aa16.56■□□□□ 0.24
PNKP-228ENST00000637325 OSBP2Q969R2 916 aa16.56■□□□□ 0.24
PNKP-228ENST00000637325 EMILIN3Q9NT22 766 aa16.56■□□□□ 0.24
PNKP-228ENST00000637325 MYCP01106 439 aaPredicted RBP16.55■□□□□ 0.24
PNKP-228ENST00000637325 APPP05067 770 aa16.55■□□□□ 0.24
PNKP-228ENST00000637325 GNAT2P19087 354 aa16.55■□□□□ 0.24
PNKP-228ENST00000637325 PRKCZQ05513 592 aa16.55■□□□□ 0.24
PNKP-228ENST00000637325 CTR9Q6PD62 1173 aa16.55■□□□□ 0.24
PNKP-228ENST00000637325 TMEM179Q6ZVK1 233 aa16.55■□□□□ 0.24
PNKP-228ENST00000637325 ACER1Q8TDN7 264 aa16.55■□□□□ 0.24
PNKP-228ENST00000637325 COA7Q96BR5 231 aa16.55■□□□□ 0.24
PNKP-228ENST00000637325 ZNF333Q96JL9 665 aa16.55■□□□□ 0.24
PNKP-228ENST00000637325 P2RX7Q99572 595 aaKnown RBP16.55■□□□□ 0.24
PNKP-228ENST00000637325 ARPP21Q9UBL0 812 aaPredicted RBP16.55■□□□□ 0.24
PNKP-228ENST00000637325 GPAA1O43292 621 aa16.54■□□□□ 0.24
PNKP-228ENST00000637325 GUCY1A2P33402 732 aa16.54■□□□□ 0.24
PNKP-228ENST00000637325 CDK8P49336 464 aa16.54■□□□□ 0.24
PNKP-228ENST00000637325 HERVK_113P62684 666 aa16.54■□□□□ 0.24
PNKP-228ENST00000637325 B4GALNT3Q6L9W6 998 aa16.54■□□□□ 0.24
PNKP-228ENST00000637325 GTF3C2Q8WUA4 911 aaPredicted RBP16.54■□□□□ 0.24
PNKP-228ENST00000637325 CCDC17Q96LX7 622 aa16.54■□□□□ 0.24
PNKP-228ENST00000637325 LNPKQ9C0E8 428 aa16.54■□□□□ 0.24
PNKP-228ENST00000637325 KIAA1683Q9H0B3 1180 aa16.54■□□□□ 0.24
PNKP-228ENST00000637325 BIN2Q9UBW5 565 aaPredicted RBP16.54■□□□□ 0.24
PNKP-228ENST00000637325 MINDY4BA8MYZ0 360 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 USP17L15C9J2P7 530 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 USP17L13C9JLJ4 530 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 USP17L11C9JVI0 530 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 USP17L18D6R9N7 530 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 USP17L22D6RA61 530 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 USP17L17D6RBQ6 530 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 USP17L19D6RCP7 530 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 USP17L20D6RJB6 530 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 M0R2C6 588 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 AKR1B1P15121 316 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 GRK4P32298 578 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 TDO2P48775 406 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 USP17L24Q0WX57 530 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 GIMAP6Q6P9H5 292 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 C16orf86Q6ZW13 317 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 C12orf42Q96LP6 360 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 STAP2Q9UGK3 403 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 GABRQQ9UN88 632 aa16.53■□□□□ 0.24
PNKP-228ENST00000637325 SALL3Q9BXA9 1300 aa16.52■□□□□ 0.24
PNKP-228ENST00000637325 POTEFA5A3E0 1075 aa16.52■□□□□ 0.24
PNKP-228ENST00000637325 GSG1L2A8MUP6 293 aa16.52■□□□□ 0.24
PNKP-228ENST00000637325 FLT3LGP49771 235 aa16.52■□□□□ 0.24
PNKP-228ENST00000637325 PDE1AP54750 535 aa16.52■□□□□ 0.24
PNKP-228ENST00000637325 SBK1Q52WX2 424 aa16.52■□□□□ 0.24
PNKP-228ENST00000637325 CCAR1Q8IX12 1150 aaKnown RBP16.52■□□□□ 0.24
PNKP-228ENST00000637325 STK11IPQ8N1F8 1099 aa16.52■□□□□ 0.24
PNKP-228ENST00000637325 GPRC5AQ8NFJ5 357 aa16.52■□□□□ 0.24
PNKP-228ENST00000637325 EVI5LQ96CN4 794 aa16.52■□□□□ 0.24
PNKP-228ENST00000637325 NACAP1Q9BZK3 213 aa16.52■□□□□ 0.24
PNKP-228ENST00000637325 MKNK2Q9HBH9 465 aa16.52■□□□□ 0.24
PNKP-228ENST00000637325 ARHGEF10LQ9HCE6 1279 aa16.52■□□□□ 0.24
PNKP-228ENST00000637325 MYH4Q9Y623 1939 aa16.52■□□□□ 0.23
PNKP-228ENST00000637325 PATL2C9JE40 543 aaKnown RBP16.51■□□□□ 0.23
PNKP-228ENST00000637325 SMIM22K7EJ46 135 aa16.51■□□□□ 0.23
PNKP-228ENST00000637325 IGHDP01880 384 aa16.51■□□□□ 0.23
PNKP-228ENST00000637325 VCAM1P19320 739 aa16.51■□□□□ 0.23
PNKP-228ENST00000637325 UBXN2AP68543 259 aa16.51■□□□□ 0.23
PNKP-228ENST00000637325 CATSPERGQ6ZRH7 1159 aa16.51■□□□□ 0.23
PNKP-228ENST00000637325 SMC5Q8IY18 1101 aa16.51■□□□□ 0.23
PNKP-228ENST00000637325 SLAIN1Q8ND83 568 aa16.51■□□□□ 0.23
PNKP-228ENST00000637325 PAGR1Q9BTK6 254 aa16.51■□□□□ 0.23
PNKP-228ENST00000637325 SH2D4AQ9H788 454 aa16.51■□□□□ 0.23
PNKP-228ENST00000637325 MORF4L1Q9UBU8 362 aa16.51■□□□□ 0.23
PNKP-228ENST00000637325 ADCY3O60266 1144 aa16.5■□□□□ 0.23
PNKP-228ENST00000637325 ATP2B2Q01814 1243 aa16.5■□□□□ 0.23
PNKP-228ENST00000637325 ICA1Q05084 483 aa16.5■□□□□ 0.23
PNKP-228ENST00000637325 ZMYM1Q5SVZ6 1142 aa16.5■□□□□ 0.23
PNKP-228ENST00000637325 SEC62Q99442 399 aaKnown RBP16.5■□□□□ 0.23
PNKP-228ENST00000637325 RPAP3Q9H6T3 665 aaPredicted RBP16.5■□□□□ 0.23
PNKP-228ENST00000637325 CWC22Q9HCG8 908 aaKnown RBP16.5■□□□□ 0.23
PNKP-228ENST00000637325 A0A1W2PRG0 241 aa16.49■□□□□ 0.23
PNKP-228ENST00000637325 TRIM6-TRIM34B2RNG4 842 aa16.49■□□□□ 0.23
PNKP-228ENST00000637325 EN2P19622 333 aaPredicted RBP16.49■□□□□ 0.23
PNKP-228ENST00000637325 ERVK-9P63128 1117 aa16.49■□□□□ 0.23
PNKP-228ENST00000637325 ERVK-24P63145 666 aa16.49■□□□□ 0.23
PNKP-228ENST00000637325 IRF5Q13568 498 aa16.49■□□□□ 0.23
PNKP-228ENST00000637325 CHD1LQ86WJ1 897 aa16.49■□□□□ 0.23
PNKP-228ENST00000637325 IFNL3Q8IZI9 196 aa16.49■□□□□ 0.23
PNKP-228ENST00000637325 ZNF287Q9HBT7 754 aa16.49■□□□□ 0.23
PNKP-228ENST00000637325 TXNRD2Q9NNW7 524 aa16.49■□□□□ 0.23
PNKP-228ENST00000637325 RBPJLQ9UBG7 517 aa16.49■□□□□ 0.23
PNKP-228ENST00000637325 PLXNB2O15031 1838 aa16.49■□□□□ 0.23
PNKP-228ENST00000637325 TNRC18O15417 2968 aaPredicted RBP16.49■□□□□ 0.23
PNKP-228ENST00000637325 PEX10O60683 326 aa16.48■□□□□ 0.23
PNKP-228ENST00000637325 CLEC10AQ8IUN9 316 aa16.48■□□□□ 0.23
PNKP-228ENST00000637325 RILPL2Q969X0 211 aa16.48■□□□□ 0.23
PNKP-228ENST00000637325 TANGO6Q9C0B7 1094 aa16.48■□□□□ 0.23
PNKP-228ENST00000637325 NAPBQ9H115 298 aa16.48■□□□□ 0.23
PNKP-228ENST00000637325 KANSL2Q9H9L4 492 aa16.48■□□□□ 0.23
PNKP-228ENST00000637325 EPB41L4AQ9HCS5 686 aaPredicted RBP16.48■□□□□ 0.23
PNKP-228ENST00000637325 RABGAP1Q9Y3P9 1069 aa16.48■□□□□ 0.23
PNKP-228ENST00000637325 ZNFX1Q9P2E3 1918 aaKnown RBP16.47■□□□□ 0.23
PNKP-228ENST00000637325 RAD21O60216 631 aa16.47■□□□□ 0.23
PNKP-228ENST00000637325 SLC3A2P08195 630 aaKnown RBP16.47■□□□□ 0.23
PNKP-228ENST00000637325 ELNP15502 786 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms