RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 DDX41Q9UJV9 622 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-238ENST00000637276 PLEKHH2Q8IVE3 1493 aa18.12■□□□□ 0.49
CACNA1A-238ENST00000637276 F13A1P00488 732 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 DDB1Q16531 1140 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 KRT12Q99456 494 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 NFKBIL1Q9UBC1 381 aaPredicted RBP18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 SYNJ2O15056 1496 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 GNGT2O14610 69 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 KRT83P78385 493 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 VSIG1Q86XK7 387 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 N4BP2L2Q92802 583 aaPredicted RBP18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 ATP6V1E2Q96A05 226 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 B4E1Z4 1266 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 NKX1-1Q15270 411 aaPredicted RBP18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 MLXIPQ9HAP2 919 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 KRT82Q9NSB4 513 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 AGRPO00253 132 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 APOEP02649 317 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 KRT3P12035 628 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 AK2P54819 239 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 THRAP3Q9Y2W1 955 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 PALM3A6NDB9 673 aaPredicted RBP18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 PPP2R3AQ06190 1150 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 ARHGEF16Q5VV41 709 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 ERICH3Q5RHP9 1530 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 EBAG9O00559 213 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 CEP104O60308 925 aa18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 CPSF2Q9P2I0 782 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-238ENST00000637276 MAD1L1Q9Y6D9 718 aa18.1■□□□□ 0.49
CACNA1A-238ENST00000637276 UBXN2AP68543 259 aa18.1■□□□□ 0.49
CACNA1A-238ENST00000637276 SRGAP1Q7Z6B7 1085 aa18.1■□□□□ 0.49
CACNA1A-238ENST00000637276 HMG20BQ9P0W2 317 aa18.1■□□□□ 0.49
CACNA1A-238ENST00000637276 SCHIP1Q9P0W5 487 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-238ENST00000637276 UQCRFS1P1P0C7P4 283 aa18.1■□□□□ 0.49
CACNA1A-238ENST00000637276 LRRC23Q53EV4 343 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-238ENST00000637276 ESYT1Q9BSJ8 1104 aa18.1■□□□□ 0.49
CACNA1A-238ENST00000637276 SLITRK6Q9H5Y7 841 aa18.1■□□□□ 0.49
CACNA1A-238ENST00000637276 TRIM75PA6NK02 468 aa18.1■□□□□ 0.49
CACNA1A-238ENST00000637276 ATP2A3Q93084 1043 aa18.1■□□□□ 0.49
CACNA1A-238ENST00000637276 IRS4O14654 1257 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-238ENST00000637276 RILPL1Q5EBL4 403 aa18.09■□□□□ 0.49
CACNA1A-238ENST00000637276 PIK3R4Q99570 1358 aa18.09■□□□□ 0.49
CACNA1A-238ENST00000637276 ABT1Q9ULW3 272 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-238ENST00000637276 RNASELQ05823 741 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-238ENST00000637276 DLATP10515 647 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-238ENST00000637276 NUCB1Q02818 461 aa18.09■□□□□ 0.49
CACNA1A-238ENST00000637276 CCDC85BQ15834 202 aaPredicted RBP18.09■□□□□ 0.49
CACNA1A-238ENST00000637276 DOK7Q18PE1 504 aa18.09■□□□□ 0.49
CACNA1A-238ENST00000637276 MUM1L1Q5H9M0 696 aa18.09■□□□□ 0.49
CACNA1A-238ENST00000637276 UVSSAQ2YD98 709 aa18.09■□□□□ 0.49
CACNA1A-238ENST00000637276 CCDC26Q8TAB7 109 aa18.09■□□□□ 0.49
CACNA1A-238ENST00000637276 ZSCAN32Q9NX65 697 aa18.09■□□□□ 0.49
CACNA1A-238ENST00000637276 PSMD2Q13200 908 aa18.08■□□□□ 0.49
CACNA1A-238ENST00000637276 ANAPC5Q9UJX4 755 aa18.08■□□□□ 0.49
CACNA1A-238ENST00000637276 FAM47AQ5JRC9 791 aa18.08■□□□□ 0.49
CACNA1A-238ENST00000637276 ZNF594Q96JF6 807 aaPredicted RBP18.08■□□□□ 0.49
CACNA1A-238ENST00000637276 INTUQ9ULD6 942 aa18.08■□□□□ 0.49
CACNA1A-238ENST00000637276 DNM2P50570 870 aa18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 RCN2Q14257 317 aa18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 ARHGEF10LQ9HCE6 1279 aa18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 MBD4O95243 580 aa18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 TRAPPC3LQ5T215 181 aa18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 CNNM2Q9H8M5 875 aa18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 WASLO00401 505 aaPredicted RBP18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 CALUO43852 315 aaPredicted RBP18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 TRMT10CQ7L0Y3 403 aaKnown RBP18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 NFATC2IPQ8NCF5 419 aa18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 BAG5Q9UL15 447 aa18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 SYF2O95926 243 aaKnown RBP18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 STMN1P16949 149 aa18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 EEPD1Q7L9B9 569 aa18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 PRIMPOLQ96LW4 560 aa18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 LRFN2Q9ULH4 789 aa18.08■□□□□ 0.48
CACNA1A-238ENST00000637276 PPHLN1Q8NEY8 458 aaKnown RBP18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 SCNN1DP51172 638 aa18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 SMARCA4P51532 1647 aa18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 VAV2P52735 878 aa18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 KRT24Q2M2I5 525 aa18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 CCDC13Q8IYE1 715 aa18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 ZFYVE19Q96K21 471 aa18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 DISC1Q9NRI5 854 aa18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 ZRANB1Q9UGI0 708 aa18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 VCPP55072 806 aaKnown RBP18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 TBC1D32Q96NH3 1257 aa18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 DAAM1Q9Y4D1 1078 aa18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 PCDHB13Q9Y5F0 798 aa18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 SUPT6HQ7KZ85 1726 aaKnown RBP18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 CAMSAP2Q08AD1 1489 aa18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 NSUN2Q08J23 767 aaKnown RBP eCLIP18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 CDAN1Q8IWY9 1227 aa18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
CACNA1A-238ENST00000637276 TNNC1P63316 161 aa18.06■□□□□ 0.48
CACNA1A-238ENST00000637276 PARP2Q9UGN5 583 aa18.06■□□□□ 0.48
CACNA1A-238ENST00000637276 BUB1O43683 1085 aa18.06■□□□□ 0.48
CACNA1A-238ENST00000637276 ZBED4O75132 1171 aa18.06■□□□□ 0.48
CACNA1A-238ENST00000637276 ABI1Q8IZP0 508 aa18.06■□□□□ 0.48
CACNA1A-238ENST00000637276 NR1I2O75469 434 aa18.06■□□□□ 0.48
CACNA1A-238ENST00000637276 TRPA1O75762 1119 aa18.06■□□□□ 0.48
CACNA1A-238ENST00000637276 OSTNP61366 133 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms