RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 PSMC4P43686 418 aa18.76■□□□□ 0.59
LINC00339-207ENST00000634712 IFNL3Q8IZI9 196 aa18.76■□□□□ 0.59
LINC00339-207ENST00000634712 OSBPL3Q9H4L5 887 aa18.76■□□□□ 0.59
LINC00339-207ENST00000634712 MKNK2Q9HBH9 465 aa18.76■□□□□ 0.59
LINC00339-207ENST00000634712 BCRP11274 1271 aa18.75■□□□□ 0.59
LINC00339-207ENST00000634712 GCLCP48506 637 aaPredicted RBP18.75■□□□□ 0.59
LINC00339-207ENST00000634712 STK11IPQ8N1F8 1099 aa18.75■□□□□ 0.59
LINC00339-207ENST00000634712 ARHGAP39Q9C0H5 1083 aa18.75■□□□□ 0.59
LINC00339-207ENST00000634712 NAPBQ9H115 298 aa18.75■□□□□ 0.59
LINC00339-207ENST00000634712 ASCC2Q9H1I8 757 aaPredicted RBP18.75■□□□□ 0.59
LINC00339-207ENST00000634712 ZNF287Q9HBT7 754 aa18.75■□□□□ 0.59
LINC00339-207ENST00000634712 HELLSQ9NRZ9 838 aa18.75■□□□□ 0.59
LINC00339-207ENST00000634712 AKR1B1P15121 316 aa18.74■□□□□ 0.59
LINC00339-207ENST00000634712 HOXA7P31268 230 aaPredicted RBP18.74■□□□□ 0.59
LINC00339-207ENST00000634712 GUCY1A2P33402 732 aa18.74■□□□□ 0.59
LINC00339-207ENST00000634712 FCGRTP55899 365 aa18.74■□□□□ 0.59
LINC00339-207ENST00000634712 ANKRD13CQ8N6S4 541 aa18.74■□□□□ 0.59
LINC00339-207ENST00000634712 ACER1Q8TDN7 264 aa18.74■□□□□ 0.59
LINC00339-207ENST00000634712 KIAA1683Q9H0B3 1180 aa18.74■□□□□ 0.59
LINC00339-207ENST00000634712 EMILIN3Q9NT22 766 aa18.74■□□□□ 0.59
LINC00339-207ENST00000634712 SMIM22K7EJ46 135 aa18.73■□□□□ 0.59
LINC00339-207ENST00000634712 SLC3A2P08195 630 aaKnown RBP18.73■□□□□ 0.59
LINC00339-207ENST00000634712 MCMDC2Q4G0Z9 681 aa18.73■□□□□ 0.59
LINC00339-207ENST00000634712 CCDC129Q6ZRS4 1044 aa18.73■□□□□ 0.59
LINC00339-207ENST00000634712 ARHGEF10LQ9HCE6 1279 aa18.73■□□□□ 0.59
LINC00339-207ENST00000634712 EPB41L4AQ9HCS5 686 aaPredicted RBP18.73■□□□□ 0.59
LINC00339-207ENST00000634712 LOC285556D6RIA3 1793 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 USP17L15C9J2P7 530 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 USP17L13C9JLJ4 530 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 USP17L11C9JVI0 530 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 USP17L18D6R9N7 530 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 USP17L22D6RA61 530 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 USP17L17D6RBQ6 530 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 USP17L19D6RCP7 530 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 USP17L20D6RJB6 530 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 PRMT2P55345 433 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 CAP1Q01518 475 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 ICA1Q05084 483 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 USP17L24Q0WX57 530 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 ZNF444Q8N0Y2 327 aaPredicted RBP18.72■□□□□ 0.59
LINC00339-207ENST00000634712 C12orf42Q96LP6 360 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 P2RX7Q99572 595 aaKnown RBP18.72■□□□□ 0.59
LINC00339-207ENST00000634712 SH2D4AQ9H788 454 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 MYH8P13535 1937 aa18.72■□□□□ 0.59
LINC00339-207ENST00000634712 ATP2B2Q01814 1243 aa18.71■□□□□ 0.59
LINC00339-207ENST00000634712 FAM110CQ1W6H9 321 aa18.71■□□□□ 0.59
LINC00339-207ENST00000634712 NBPF11Q86T75 865 aa18.71■□□□□ 0.59
LINC00339-207ENST00000634712 TRIM47Q96LD4 638 aa18.71■□□□□ 0.59
LINC00339-207ENST00000634712 FAM227BQ96M60 508 aa18.71■□□□□ 0.59
LINC00339-207ENST00000634712 MFAP1P55081 439 aaKnown RBP18.7■□□□□ 0.58
LINC00339-207ENST00000634712 PDE4BQ07343 736 aa18.7■□□□□ 0.58
LINC00339-207ENST00000634712 NMIQ13287 307 aaPredicted RBP18.7■□□□□ 0.58
LINC00339-207ENST00000634712 GTF3C2Q8WUA4 911 aaPredicted RBP18.7■□□□□ 0.58
LINC00339-207ENST00000634712 KANSL2Q9H9L4 492 aa18.7■□□□□ 0.58
LINC00339-207ENST00000634712 SRRDQ9UH36 339 aa18.7■□□□□ 0.58
LINC00339-207ENST00000634712 PTCH2Q9Y6C5 1203 aa18.7■□□□□ 0.58
LINC00339-207ENST00000634712 HIP1O00291 1037 aa18.69■□□□□ 0.58
LINC00339-207ENST00000634712 TNPO2O14787 897 aaKnown RBP18.69■□□□□ 0.58
LINC00339-207ENST00000634712 SDSP20132 328 aa18.69■□□□□ 0.58
LINC00339-207ENST00000634712 HERVK_113P62684 666 aa18.69■□□□□ 0.58
LINC00339-207ENST00000634712 SLC9C1Q4G0N8 1177 aa18.69■□□□□ 0.58
LINC00339-207ENST00000634712 RAET1EQ8TD07 263 aa18.69■□□□□ 0.58
LINC00339-207ENST00000634712 DIAPH3Q9NSV4 1193 aa18.69■□□□□ 0.58
LINC00339-207ENST00000634712 A0A0D9SFI3 127 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 A0A1W2PRG0 241 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 VCAM1P19320 739 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 CTGFP29279 349 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 PPARAQ07869 468 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 CATSPERGQ6ZRH7 1159 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 CCAR1Q8IX12 1150 aaKnown RBP18.68■□□□□ 0.58
LINC00339-207ENST00000634712 COA7Q96BR5 231 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 RPAP3Q9H6T3 665 aaPredicted RBP18.68■□□□□ 0.58
LINC00339-207ENST00000634712 MYPNQ86TC9 1320 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 ROBO3Q96MS0 1386 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 PRDM1O75626 825 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 EEF2P13639 858 aaKnown RBP18.68■□□□□ 0.58
LINC00339-207ENST00000634712 RASA1P20936 1047 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 PDE4AP27815 886 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 SOX10P56693 466 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 CLEC10AQ8IUN9 316 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 GPRC5AQ8NFJ5 357 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 TMX2Q9Y320 296 aa18.68■□□□□ 0.58
LINC00339-207ENST00000634712 RAD21O60216 631 aa18.67■□□□□ 0.58
LINC00339-207ENST00000634712 VPS53Q5VIR6 699 aa18.67■□□□□ 0.58
LINC00339-207ENST00000634712 CWC27Q6UX04 472 aaKnown RBP18.67■□□□□ 0.58
LINC00339-207ENST00000634712 LPAR1Q92633 364 aa18.67■□□□□ 0.58
LINC00339-207ENST00000634712 PAGR1Q9BTK6 254 aa18.67■□□□□ 0.58
LINC00339-207ENST00000634712 TANGO6Q9C0B7 1094 aa18.67■□□□□ 0.58
LINC00339-207ENST00000634712 MORF4L1Q9UBU8 362 aa18.67■□□□□ 0.58
LINC00339-207ENST00000634712 CCDC171Q6TFL3 1326 aa18.66■□□□□ 0.58
LINC00339-207ENST00000634712 PRKCZQ05513 592 aa18.66■□□□□ 0.58
LINC00339-207ENST00000634712 ALX1Q15699 326 aa18.66■□□□□ 0.58
LINC00339-207ENST00000634712 SIAH1Q8IUQ4 282 aa18.66■□□□□ 0.58
LINC00339-207ENST00000634712 VCPKMTQ9H867 229 aa18.66■□□□□ 0.58
LINC00339-207ENST00000634712 GOPCQ9HD26 462 aa18.66■□□□□ 0.58
LINC00339-207ENST00000634712 HOXC10Q9NYD6 342 aa18.66■□□□□ 0.58
LINC00339-207ENST00000634712 TSPY3P0CV98 308 aa18.65■□□□□ 0.58
LINC00339-207ENST00000634712 TSPY8P0CW00 308 aa18.65■□□□□ 0.58
LINC00339-207ENST00000634712 HSPD1P10809 573 aaKnown RBP18.65■□□□□ 0.58
LINC00339-207ENST00000634712 CTDSPL2Q05D32 466 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms