RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 RALGPS1Q5JS13 557 aa6.35□□□□□ -1.39
CHD2-219ENST00000630016 CIAPIN1Q6FI81 312 aa6.35□□□□□ -1.39
CHD2-219ENST00000630016 ATG14Q6ZNE5 492 aa6.35□□□□□ -1.39
CHD2-219ENST00000630016 MRPL41Q8IXM3 137 aaKnown RBP6.35□□□□□ -1.39
CHD2-219ENST00000630016 DPH2Q9BQC3 489 aaPredicted RBP6.35□□□□□ -1.39
CHD2-219ENST00000630016 CD320Q9NPF0 282 aa6.35□□□□□ -1.39
CHD2-219ENST00000630016 RAPGEFL1Q9UHV5 662 aa6.35□□□□□ -1.39
CHD2-219ENST00000630016 KRTAP9-7A8MTY7 169 aa6.34□□□□□ -1.39
CHD2-219ENST00000630016 HPXP02790 462 aa6.34□□□□□ -1.39
CHD2-219ENST00000630016 LDHBP07195 334 aaKnown RBP6.34□□□□□ -1.39
CHD2-219ENST00000630016 SLC6A19Q695T7 634 aa6.34□□□□□ -1.39
CHD2-219ENST00000630016 CREG2Q8IUH2 290 aa6.34□□□□□ -1.39
CHD2-219ENST00000630016 TMEM87BQ96K49 555 aa6.34□□□□□ -1.39
CHD2-219ENST00000630016 TJP2Q9UDY2 1190 aa6.34□□□□□ -1.39
CHD2-219ENST00000630016 P4HBP07237 508 aaKnown RBP6.33□□□□□ -1.4
CHD2-219ENST00000630016 TPP2P29144 1249 aaPredicted RBP6.33□□□□□ -1.4
CHD2-219ENST00000630016 GNA15P30679 374 aa6.33□□□□□ -1.4
CHD2-219ENST00000630016 DIEXFQ68CQ4 756 aaKnown RBP6.33□□□□□ -1.4
CHD2-219ENST00000630016 MIR1-1HGQ9H1L0 117 aa6.33□□□□□ -1.4
CHD2-219ENST00000630016 PCDHB5Q9Y5E4 795 aa6.33□□□□□ -1.4
CHD2-219ENST00000630016 ETV2O00321 342 aaPredicted RBP6.32□□□□□ -1.4
CHD2-219ENST00000630016 GFRA2O00451 464 aa6.32□□□□□ -1.4
CHD2-219ENST00000630016 ERVFC1P60507 584 aa6.32□□□□□ -1.4
CHD2-219ENST00000630016 TTLL10Q6ZVT0 673 aa6.32□□□□□ -1.4
CHD2-219ENST00000630016 AMIGO3Q86WK7 504 aa6.32□□□□□ -1.4
CHD2-219ENST00000630016 SYTL4Q96C24 671 aaPredicted RBP6.32□□□□□ -1.4
CHD2-219ENST00000630016 KCNK12Q9HB15 430 aa6.32□□□□□ -1.4
CHD2-219ENST00000630016 GPATCH2Q9NW75 528 aa6.32□□□□□ -1.4
CHD2-219ENST00000630016 DUSP13Q9UII6 198 aa6.32□□□□□ -1.4
CHD2-219ENST00000630016 NCANO14594 1321 aa6.31□□□□□ -1.4
CHD2-219ENST00000630016 NUAK1O60285 661 aa6.31□□□□□ -1.4
CHD2-219ENST00000630016 SRFP11831 508 aa6.31□□□□□ -1.4
CHD2-219ENST00000630016 LIG3P49916 1009 aa6.31□□□□□ -1.4
CHD2-219ENST00000630016 AGMOQ6ZNB7 445 aa6.31□□□□□ -1.4
CHD2-219ENST00000630016 LILRA2Q8N149 483 aa6.31□□□□□ -1.4
CHD2-219ENST00000630016 PDZD8Q8NEN9 1154 aa6.31□□□□□ -1.4
CHD2-219ENST00000630016 KCNN1Q92952 543 aa6.31□□□□□ -1.4
CHD2-219ENST00000630016 Q96M66 194 aa6.31□□□□□ -1.4
CHD2-219ENST00000630016 ADAMTS10Q9H324 1103 aa6.31□□□□□ -1.4
CHD2-219ENST00000630016 ADAM30Q9UKF2 790 aa6.31□□□□□ -1.4
CHD2-219ENST00000630016 KCNH3Q9ULD8 1083 aa6.31□□□□□ -1.4
CHD2-219ENST00000630016 SMG5Q9UPR3 1016 aaKnown RBP6.31□□□□□ -1.4
CHD2-219ENST00000630016 IVNS1ABPQ9Y6Y0 642 aa6.31□□□□□ -1.4
CHD2-219ENST00000630016 B8ZZF3 427 aa6.3□□□□□ -1.4
CHD2-219ENST00000630016 PRRG2O14669 202 aa6.3□□□□□ -1.4
CHD2-219ENST00000630016 INHBBP09529 407 aa6.3□□□□□ -1.4
CHD2-219ENST00000630016 LTKP29376 864 aa6.3□□□□□ -1.4
CHD2-219ENST00000630016 LINC00310P59036 64 aa6.3□□□□□ -1.4
CHD2-219ENST00000630016 EGR3Q06889 387 aa6.3□□□□□ -1.4
CHD2-219ENST00000630016 MAP3K11Q16584 847 aa6.3□□□□□ -1.4
CHD2-219ENST00000630016 MCATQ8IVS2 390 aaKnown RBP6.3□□□□□ -1.4
CHD2-219ENST00000630016 OXR1Q8N573 874 aa6.3□□□□□ -1.4
CHD2-219ENST00000630016 DNAJB8Q8NHS0 232 aa6.3□□□□□ -1.4
CHD2-219ENST00000630016 DHX38Q92620 1227 aaKnown RBP6.3□□□□□ -1.4
CHD2-219ENST00000630016 KRTAP4-11Q9BYQ6 195 aa6.3□□□□□ -1.4
CHD2-219ENST00000630016 RNF32Q9H0A6 362 aa6.3□□□□□ -1.4
CHD2-219ENST00000630016 SLC6A17Q9H1V8 727 aa6.3□□□□□ -1.4
CHD2-219ENST00000630016 FITM1A5D6W6 292 aa6.29□□□□□ -1.4
CHD2-219ENST00000630016 PRPF40AO75400 957 aaKnown RBP6.29□□□□□ -1.4
CHD2-219ENST00000630016 RPL6Q02878 288 aaKnown RBP6.29□□□□□ -1.4
CHD2-219ENST00000630016 TSNAXIP1Q2TAA8 658 aa6.29□□□□□ -1.4
CHD2-219ENST00000630016 GAB4Q2WGN9 574 aa6.29□□□□□ -1.4
CHD2-219ENST00000630016 IRF2BP1Q8IU81 584 aa6.29□□□□□ -1.4
CHD2-219ENST00000630016 CYB5D2Q8WUJ1 264 aa6.29□□□□□ -1.4
CHD2-219ENST00000630016 GPR62Q9BZJ7 368 aa6.29□□□□□ -1.4
CHD2-219ENST00000630016 DUSP15Q9H1R2 295 aaPredicted RBP6.29□□□□□ -1.4
CHD2-219ENST00000630016 CEP131Q9UPN4 1083 aa6.29□□□□□ -1.4
CHD2-219ENST00000630016 WASH4PA8MWX3 477 aa6.28□□□□□ -1.4
CHD2-219ENST00000630016 SUPT5HO00267 1087 aaKnown RBP6.28□□□□□ -1.4
CHD2-219ENST00000630016 ZGLP1P0C6A0 271 aa6.28□□□□□ -1.4
CHD2-219ENST00000630016 RLBP1P12271 317 aa6.28□□□□□ -1.4
CHD2-219ENST00000630016 TRHRP34981 398 aaPredicted RBP6.28□□□□□ -1.4
CHD2-219ENST00000630016 KCNA1Q09470 495 aa6.28□□□□□ -1.4
CHD2-219ENST00000630016 TSPYL5Q86VY4 417 aaPredicted RBP6.28□□□□□ -1.4
CHD2-219ENST00000630016 DTWD2Q8NBA8 298 aa6.28□□□□□ -1.4
CHD2-219ENST00000630016 ACSF2Q96CM8 615 aaPredicted RBP6.28□□□□□ -1.4
CHD2-219ENST00000630016 CWC22Q9HCG8 908 aaKnown RBP6.28□□□□□ -1.4
CHD2-219ENST00000630016 AK5Q9Y6K8 562 aa6.28□□□□□ -1.4
CHD2-219ENST00000630016 ERICH6Q7L0X2 663 aa6.27□□□□□ -1.41
CHD2-219ENST00000630016 FAM13CQ8NE31 585 aa6.27□□□□□ -1.41
CHD2-219ENST00000630016 RBAK-RBAKDNI3L0D1 243 aa6.26□□□□□ -1.41
CHD2-219ENST00000630016 SEMA7AO75326 666 aa6.26□□□□□ -1.41
CHD2-219ENST00000630016 TFE3P19532 575 aaPredicted RBP6.26□□□□□ -1.41
CHD2-219ENST00000630016 YARSP54577 528 aaKnown RBP6.26□□□□□ -1.41
CHD2-219ENST00000630016 CTSWP56202 376 aa6.26□□□□□ -1.41
CHD2-219ENST00000630016 NR0B2Q15466 257 aa6.26□□□□□ -1.41
CHD2-219ENST00000630016 RNF141Q8WVD5 230 aa6.26□□□□□ -1.41
CHD2-219ENST00000630016 C19orf44Q9H6X5 657 aa6.26□□□□□ -1.41
CHD2-219ENST00000630016 PEX10O60683 326 aa6.25□□□□□ -1.41
CHD2-219ENST00000630016 BPNT1O95861 308 aa6.25□□□□□ -1.41
CHD2-219ENST00000630016 PLCG1P19174 1290 aa6.25□□□□□ -1.41
CHD2-219ENST00000630016 CHRNEQ04844 493 aa6.25□□□□□ -1.41
CHD2-219ENST00000630016 DUSP4Q13115 394 aa6.25□□□□□ -1.41
CHD2-219ENST00000630016 ZNF605Q86T29 641 aa6.25□□□□□ -1.41
CHD2-219ENST00000630016 PPP1R13LQ8WUF5 828 aa6.25□□□□□ -1.41
CHD2-219ENST00000630016 JARID2Q92833 1246 aaPredicted RBP6.25□□□□□ -1.41
CHD2-219ENST00000630016 INTS4Q96HW7 963 aaKnown RBP6.25□□□□□ -1.41
CHD2-219ENST00000630016 KRTAP4-5Q9BYR2 181 aa6.25□□□□□ -1.41
CHD2-219ENST00000630016 MCOLN1Q9GZU1 580 aa6.25□□□□□ -1.41
CHD2-219ENST00000630016 IRF2BPLQ9H1B7 796 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms