RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 NCOR1O75376 2440 aa14.78□□□□□ -0.04
CHD2-218ENST00000629346 GRXCR1A8MXD5 290 aa14.78□□□□□ -0.04
CHD2-218ENST00000629346 CLTBP09497 229 aa14.78□□□□□ -0.04
CHD2-218ENST00000629346 HOXC6P09630 235 aa14.78□□□□□ -0.04
CHD2-218ENST00000629346 PBX2P40425 430 aa14.78□□□□□ -0.04
CHD2-218ENST00000629346 LRRC41Q15345 812 aa14.78□□□□□ -0.04
CHD2-218ENST00000629346 PRAMEF19Q5SWL8 479 aa14.78□□□□□ -0.04
CHD2-218ENST00000629346 DPP9Q86TI2 863 aa14.78□□□□□ -0.04
CHD2-218ENST00000629346 TEX11Q8IYF3 940 aa14.78□□□□□ -0.04
CHD2-218ENST00000629346 PI4KBQ9UBF8 816 aa14.78□□□□□ -0.04
CHD2-218ENST00000629346 SYNGAP1Q96PV0 1343 aa14.77□□□□□ -0.04
CHD2-218ENST00000629346 PQBP1O60828 265 aaKnown RBP14.77□□□□□ -0.05
CHD2-218ENST00000629346 GRB14Q14449 540 aa14.77□□□□□ -0.05
CHD2-218ENST00000629346 USP17L2Q6R6M4 530 aa14.77□□□□□ -0.05
CHD2-218ENST00000629346 CRACR2BQ8N4Y2 399 aaPredicted RBP14.77□□□□□ -0.05
CHD2-218ENST00000629346 LRFN3Q9BTN0 628 aa14.77□□□□□ -0.05
CHD2-218ENST00000629346 USP44Q9H0E7 712 aa14.77□□□□□ -0.05
CHD2-218ENST00000629346 TMEM39AQ9NV64 488 aa14.77□□□□□ -0.05
CHD2-218ENST00000629346 KIAA0355O15063 1070 aa14.76□□□□□ -0.05
CHD2-218ENST00000629346 SEPT4O43236 478 aa14.76□□□□□ -0.05
CHD2-218ENST00000629346 LDHCP07864 332 aa14.76□□□□□ -0.05
CHD2-218ENST00000629346 TIMM10P62072 90 aa14.76□□□□□ -0.05
CHD2-218ENST00000629346 ADGRE1Q14246 886 aa14.76□□□□□ -0.05
CHD2-218ENST00000629346 C1orf53Q5VUE5 145 aa14.76□□□□□ -0.05
CHD2-218ENST00000629346 TBC1D9Q6ZT07 1266 aa14.76□□□□□ -0.05
CHD2-218ENST00000629346 TRIM34Q9BYJ4 488 aa14.76□□□□□ -0.05
CHD2-218ENST00000629346 PBX4Q9BYU1 374 aa14.76□□□□□ -0.05
CHD2-218ENST00000629346 MRS2Q9HD23 443 aa14.76□□□□□ -0.05
CHD2-218ENST00000629346 BTBD7Q9P203 1132 aa14.76□□□□□ -0.05
CHD2-218ENST00000629346 USP17L15C9J2P7 530 aa14.75□□□□□ -0.05
CHD2-218ENST00000629346 USP17L13C9JLJ4 530 aa14.75□□□□□ -0.05
CHD2-218ENST00000629346 USP17L11C9JVI0 530 aa14.75□□□□□ -0.05
CHD2-218ENST00000629346 USP17L18D6R9N7 530 aa14.75□□□□□ -0.05
CHD2-218ENST00000629346 USP17L22D6RA61 530 aa14.75□□□□□ -0.05
CHD2-218ENST00000629346 USP17L17D6RBQ6 530 aa14.75□□□□□ -0.05
CHD2-218ENST00000629346 USP17L19D6RCP7 530 aa14.75□□□□□ -0.05
CHD2-218ENST00000629346 USP17L20D6RJB6 530 aa14.75□□□□□ -0.05
CHD2-218ENST00000629346 GSTO1P78417 241 aa14.75□□□□□ -0.05
CHD2-218ENST00000629346 USP17L24Q0WX57 530 aa14.75□□□□□ -0.05
CHD2-218ENST00000629346 FAM47AQ5JRC9 791 aa14.75□□□□□ -0.05
CHD2-218ENST00000629346 SH3RF3Q8TEJ3 882 aaPredicted RBP14.75□□□□□ -0.05
CHD2-218ENST00000629346 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.75□□□□□ -0.05
CHD2-218ENST00000629346 EPHX3Q9H6B9 360 aa14.75□□□□□ -0.05
CHD2-218ENST00000629346 DNAJC18Q9H819 358 aa14.75□□□□□ -0.05
CHD2-218ENST00000629346 ZBTB21Q9ULJ3 1066 aa14.75□□□□□ -0.05
CHD2-218ENST00000629346 TCF20Q9UGU0 1960 aaKnown RBP14.74□□□□□ -0.05
CHD2-218ENST00000629346 CHD9Q3L8U1 2897 aa14.74□□□□□ -0.05
CHD2-218ENST00000629346 CIAO1O76071 339 aa14.74□□□□□ -0.05
CHD2-218ENST00000629346 ADORA2AP29274 412 aa14.74□□□□□ -0.05
CHD2-218ENST00000629346 TFF2Q03403 129 aa14.74□□□□□ -0.05
CHD2-218ENST00000629346 WDR63Q8IWG1 891 aa14.74□□□□□ -0.05
CHD2-218ENST00000629346 MICALL1Q8N3F8 863 aa14.74□□□□□ -0.05
CHD2-218ENST00000629346 NSUN4Q96CB9 384 aaKnown RBP14.74□□□□□ -0.05
CHD2-218ENST00000629346 FEZ1Q99689 392 aa14.74□□□□□ -0.05
CHD2-218ENST00000629346 DHX36Q9H2U1 1008 aaKnown RBP14.74□□□□□ -0.05
CHD2-218ENST00000629346 RAI14Q9P0K7 980 aa14.74□□□□□ -0.05
CHD2-218ENST00000629346 MAP4K4O95819 1239 aaPredicted RBP14.73□□□□□ -0.05
CHD2-218ENST00000629346 IGHA2P01877 340 aa14.73□□□□□ -0.05
CHD2-218ENST00000629346 BMP1P13497 986 aa14.73□□□□□ -0.05
CHD2-218ENST00000629346 OLFML2BQ68BL8 750 aa14.73□□□□□ -0.05
CHD2-218ENST00000629346 CATSPERGQ6ZRH7 1159 aa14.73□□□□□ -0.05
CHD2-218ENST00000629346 ALYREFQ86V81 257 aaKnown RBP14.73□□□□□ -0.05
CHD2-218ENST00000629346 MAPKAPK5Q8IW41 473 aa14.73□□□□□ -0.05
CHD2-218ENST00000629346 SLC44A5Q8NCS7 719 aa14.73□□□□□ -0.05
CHD2-218ENST00000629346 TSPYL2Q9H2G4 693 aaPredicted RBP14.73□□□□□ -0.05
CHD2-218ENST00000629346 PHF24Q9UPV7 400 aa14.73□□□□□ -0.05
CHD2-218ENST00000629346 PA2G4Q9UQ80 394 aaKnown RBP14.73□□□□□ -0.05
CHD2-218ENST00000629346 ARIH1Q9Y4X5 557 aaPredicted RBP14.73□□□□□ -0.05
CHD2-218ENST00000629346 PDS5AQ29RF7 1337 aaKnown RBP14.72□□□□□ -0.05
CHD2-218ENST00000629346 GH2P01242 217 aa14.72□□□□□ -0.05
CHD2-218ENST00000629346 IL15P40933 162 aaPredicted RBP14.72□□□□□ -0.05
CHD2-218ENST00000629346 KCNQ1P51787 676 aa14.72□□□□□ -0.05
CHD2-218ENST00000629346 FAAP100Q0VG06 881 aa14.72□□□□□ -0.05
CHD2-218ENST00000629346 PI16Q6UXB8 463 aa14.72□□□□□ -0.05
CHD2-218ENST00000629346 FOXP4Q8IVH2 680 aaPredicted RBP14.72□□□□□ -0.05
CHD2-218ENST00000629346 TGFBRAP1Q8WUH2 860 aa14.72□□□□□ -0.05
CHD2-218ENST00000629346 NOL10Q9BSC4 688 aaKnown RBP14.72□□□□□ -0.05
CHD2-218ENST00000629346 FBXO3Q9UK99 471 aa14.72□□□□□ -0.05
CHD2-218ENST00000629346 PALD1Q9ULE6 856 aa14.72□□□□□ -0.05
CHD2-218ENST00000629346 PLXNA1Q9UIW2 1896 aa14.72□□□□□ -0.05
CHD2-218ENST00000629346 XIRP2A4UGR9 3374 aa14.71□□□□□ -0.05
CHD2-218ENST00000629346 COBLO75128 1261 aa14.71□□□□□ -0.05
CHD2-218ENST00000629346 PGK1P00558 417 aa14.71□□□□□ -0.05
CHD2-218ENST00000629346 TMEM31Q5JXX7 168 aa14.71□□□□□ -0.05
CHD2-218ENST00000629346 XAGE2Q96GT9 111 aa14.71□□□□□ -0.05
CHD2-218ENST00000629346 XPNPEP3Q9NQH7 507 aa14.71□□□□□ -0.05
CHD2-218ENST00000629346 AATFQ9NY61 560 aaKnown RBP eCLIP14.71□□□□□ -0.05
CHD2-218ENST00000629346 CXXC1Q9P0U4 656 aaPredicted RBP14.71□□□□□ -0.05
CHD2-218ENST00000629346 HMG20BQ9P0W2 317 aa14.71□□□□□ -0.05
CHD2-218ENST00000629346 SAP30BPQ9UHR5 308 aaKnown RBP14.71□□□□□ -0.05
CHD2-218ENST00000629346 MYO9BQ13459 2157 aa14.71□□□□□ -0.05
CHD2-218ENST00000629346 SIPA1L1O43166 1804 aa14.71□□□□□ -0.06
CHD2-218ENST00000629346 REV3LO60673 3130 aa14.7□□□□□ -0.06
CHD2-218ENST00000629346 A0A1W2PQ45 241 aaPredicted RBP14.7□□□□□ -0.06
CHD2-218ENST00000629346 A0A1W2PQY0 241 aa14.7□□□□□ -0.06
CHD2-218ENST00000629346 SPDYE16A6NNV3 312 aaPredicted RBP14.7□□□□□ -0.06
CHD2-218ENST00000629346 DCDC2CA8MYV0 355 aa14.7□□□□□ -0.06
CHD2-218ENST00000629346 VCAM1P19320 739 aa14.7□□□□□ -0.06
CHD2-218ENST00000629346 SKIV2LQ15477 1246 aaKnown RBP14.7□□□□□ -0.06
CHD2-218ENST00000629346 C16orf59Q7L2K0 433 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms