RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-219	ENST00000629151	REM2	Q8IYK8	340 aa	Predicted RBP	13.58	□□□□□ -0.24
PTPN7-219	ENST00000629151	ZNF280C	Q8ND82	737 aa		13.58	□□□□□ -0.24
PTPN7-219	ENST00000629151	MKL1	Q969V6	931 aa		13.58	□□□□□ -0.24
PTPN7-219	ENST00000629151	TBC1D32	Q96NH3	1257 aa		13.58	□□□□□ -0.24
PTPN7-219	ENST00000629151	INCENP	Q9NQS7	918 aa		13.58	□□□□□ -0.24
PTPN7-219	ENST00000629151	NAV1	Q8NEY1	1877 aa		13.57	□□□□□ -0.24
PTPN7-219	ENST00000629151	USP17L10	C9JJH3	530 aa		13.57	□□□□□ -0.24
PTPN7-219	ENST00000629151	IFIT3	O14879	490 aa	Known RBP	13.57	□□□□□ -0.24
PTPN7-219	ENST00000629151	PRC1	O43663	620 aa		13.57	□□□□□ -0.24
PTPN7-219	ENST00000629151	SLURP2	P0DP57	97 aa		13.57	□□□□□ -0.24
PTPN7-219	ENST00000629151	ZNF157	P51786	506 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-219	ENST00000629151	INHBE	P58166	350 aa		13.57	□□□□□ -0.24
PTPN7-219	ENST00000629151	EXOSC10	Q01780	885 aa	Known RBP	13.57	□□□□□ -0.24
PTPN7-219	ENST00000629151	SEPT2	Q15019	361 aa		13.57	□□□□□ -0.24
PTPN7-219	ENST00000629151	DEFB115	Q30KQ5	88 aa		13.57	□□□□□ -0.24
PTPN7-219	ENST00000629151	RUFY3	Q7L099	469 aa		13.57	□□□□□ -0.24
PTPN7-219	ENST00000629151	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
PTPN7-219	ENST00000629151	ELP3	Q9H9T3	547 aa		13.57	□□□□□ -0.24
PTPN7-219	ENST00000629151	TACC3	Q9Y6A5	838 aa		13.57	□□□□□ -0.24
PTPN7-219	ENST00000629151	RASSF10	A6NK89	507 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	TOP1	P11387	765 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	CAST	P20810	708 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	RPS6KB1	P23443	525 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	GUCY1A2	P33402	732 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	LIFR	P42702	1097 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	GTF2A2	P52657	109 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	BACE1	P56817	501 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	FGD1	P98174	961 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	RABEP1	Q15276	862 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	ANKRD1	Q15327	319 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	ADCK5	Q3MIX3	580 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	FASTKD5	Q7L8L6	764 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	LPAR1	Q92633	364 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	CEP95	Q96GE4	821 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	KIAA1683	Q9H0B3	1180 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	IL17RB	Q9NRM6	502 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	STX8	Q9UNK0	236 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	FZD1	Q9UP38	647 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	KCNH4	Q9UQ05	1017 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	TMX2	Q9Y320	296 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	AFG3L2	Q9Y4W6	797 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	TAF6L	Q9Y6J9	622 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	MYH1	P12882	1939 aa		13.56	□□□□□ -0.24
PTPN7-219	ENST00000629151	EEF2	P13639	858 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	HSPA6	P17066	643 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	SPP2	Q13103	211 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	SNAPC2	Q13487	334 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	WTAP	Q15007	396 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	TMEM67	Q5HYA8	995 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	IFIT1B	Q5T764	474 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	SPRYD7	Q5W111	196 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	USP17L2	Q6R6M4	530 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	SYNE3	Q6ZMZ3	975 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	CYB5R4	Q7L1T6	521 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	IGDCC4	Q8TDY8	1250 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	OPTN	Q96CV9	577 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	WNK4	Q96J92	1243 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	CLMN	Q96JQ2	1002 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	KAT14	Q9H8E8	782 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	GOPC	Q9HD26	462 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	CLIP2	Q9UDT6	1046 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	TNKS	O95271	1327 aa		13.55	□□□□□ -0.24
PTPN7-219	ENST00000629151	CETP	P11597	493 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	RCAN1	P53805	252 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	JAG1	P78504	1218 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	NOG	Q13253	232 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	PPP2R5B	Q15173	497 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	SH3D19	Q5HYK7	790 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	RCSD1	Q6JBY9	416 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	SGMS1	Q86VZ5	419 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	GMCL1P1	Q8NEA9	526 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	CHMP4C	Q96CF2	233 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	OTUD5	Q96G74	571 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	C12orf42	Q96LP6	360 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	FEZ1	Q99689	392 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	PDRG1	Q9NUG6	133 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	TMOD4	Q9NZQ9	345 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	CDK5RAP2	Q96SN8	1893 aa		13.54	□□□□□ -0.24
PTPN7-219	ENST00000629151	POLR2A	P24928	1970 aa	Known RBP	13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	MANSC4	A6NHS7	340 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	IRF6	O14896	467 aa		13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	ST18	O60284	1047 aa		13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	SLC10A3	P09131	477 aa		13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	CALM1	P0DP23	149 aa		13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	CALM2	P0DP24	149 aa		13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	CALM3	P0DP25	149 aa		13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	NEK4	P51957	841 aa		13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	ANTXR2	P58335	489 aa		13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	ATP2B2	Q01814	1243 aa		13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	SEC23A	Q15436	765 aa		13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	CATIP	Q7Z7H3	387 aa		13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	SIAH1	Q8IUQ4	282 aa		13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	ENAH	Q8N8S7	591 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	MAP3K14	Q99558	947 aa		13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	AGXT2	Q9BYV1	514 aa		13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	VCPKMT	Q9H867	229 aa		13.53	□□□□□ -0.24
PTPN7-219	ENST00000629151	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.52	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms