RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 PDE4AP27815 886 aa24.7■■□□□ 1.54
CIRBP-246ENST00000628979 LACTBP83111 547 aaPredicted RBP24.7■■□□□ 1.54
CIRBP-246ENST00000628979 FBXO46Q6PJ61 603 aaPredicted RBP24.7■■□□□ 1.54
CIRBP-246ENST00000628979 FAM227BQ96M60 508 aa24.7■■□□□ 1.54
CIRBP-246ENST00000628979 HELLSQ9NRZ9 838 aa24.7■■□□□ 1.54
CIRBP-246ENST00000628979 EMILIN3Q9NT22 766 aa24.7■■□□□ 1.54
CIRBP-246ENST00000628979 HPS5Q9UPZ3 1129 aa24.7■■□□□ 1.54
CIRBP-246ENST00000628979 TMEM179Q6ZVK1 233 aa24.69■■□□□ 1.54
CIRBP-246ENST00000628979 ASCC2Q9H1I8 757 aaPredicted RBP24.69■■□□□ 1.54
CIRBP-246ENST00000628979 TAOK2Q9UL54 1235 aa24.69■■□□□ 1.54
CIRBP-246ENST00000628979 ZSWIM8A7E2V4 1837 aa24.69■■□□□ 1.54
CIRBP-246ENST00000628979 A0A0D9SFI3 127 aa24.68■■□□□ 1.54
CIRBP-246ENST00000628979 IRX3P78415 501 aaPredicted RBP24.68■■□□□ 1.54
CIRBP-246ENST00000628979 NMIQ13287 307 aaPredicted RBP24.68■■□□□ 1.54
CIRBP-246ENST00000628979 NAPBQ9H115 298 aa24.68■■□□□ 1.54
CIRBP-246ENST00000628979 MKNK2Q9HBH9 465 aa24.68■■□□□ 1.54
CIRBP-246ENST00000628979 FMNL1O95466 1100 aaPredicted RBP24.67■■□□□ 1.54
CIRBP-246ENST00000628979 BCRP11274 1271 aa24.67■■□□□ 1.54
CIRBP-246ENST00000628979 PSMC4P43686 418 aa24.67■■□□□ 1.54
CIRBP-246ENST00000628979 USP14P54578 494 aa24.67■■□□□ 1.54
CIRBP-246ENST00000628979 MCMDC2Q4G0Z9 681 aa24.67■■□□□ 1.54
CIRBP-246ENST00000628979 CLEC10AQ8IUN9 316 aa24.67■■□□□ 1.54
CIRBP-246ENST00000628979 ANKRD13CQ8N6S4 541 aa24.67■■□□□ 1.54
CIRBP-246ENST00000628979 CCDC17Q96LX7 622 aa24.67■■□□□ 1.54
CIRBP-246ENST00000628979 PTPN22Q9Y2R2 807 aa24.67■■□□□ 1.54
CIRBP-246ENST00000628979 SDSP20132 328 aa24.66■■□□□ 1.54
CIRBP-246ENST00000628979 CTGFP29279 349 aa24.65■■□□□ 1.54
CIRBP-246ENST00000628979 ATP2B2Q01814 1243 aa24.65■■□□□ 1.54
CIRBP-246ENST00000628979 VPS53Q5VIR6 699 aa24.65■■□□□ 1.54
CIRBP-246ENST00000628979 P2RX7Q99572 595 aaKnown RBP24.65■■□□□ 1.54
CIRBP-246ENST00000628979 KIAA1683Q9H0B3 1180 aa24.65■■□□□ 1.54
CIRBP-246ENST00000628979 A0A1W2PRG0 241 aa24.64■■□□□ 1.54
CIRBP-246ENST00000628979 PRDM1O75626 825 aa24.64■■□□□ 1.54
CIRBP-246ENST00000628979 HOXA7P31268 230 aaPredicted RBP24.64■■□□□ 1.54
CIRBP-246ENST00000628979 ICA1Q05084 483 aa24.64■■□□□ 1.54
CIRBP-246ENST00000628979 TRIM47Q96LD4 638 aa24.64■■□□□ 1.54
CIRBP-246ENST00000628979 TICAM2Q86XR7 235 aa24.63■■□□□ 1.53
CIRBP-246ENST00000628979 C12orf42Q96LP6 360 aa24.63■■□□□ 1.53
CIRBP-246ENST00000628979 ARHGEF10LQ9HCE6 1279 aa24.63■■□□□ 1.53
CIRBP-246ENST00000628979 FOXP2O15409 715 aa24.62■■□□□ 1.53
CIRBP-246ENST00000628979 SLC3A2P08195 630 aaKnown RBP24.62■■□□□ 1.53
CIRBP-246ENST00000628979 RASA1P20936 1047 aa24.62■■□□□ 1.53
CIRBP-246ENST00000628979 GCLCP48506 637 aaPredicted RBP24.62■■□□□ 1.53
CIRBP-246ENST00000628979 FCGRTP55899 365 aa24.62■■□□□ 1.53
CIRBP-246ENST00000628979 PPARAQ07869 468 aa24.62■■□□□ 1.53
CIRBP-246ENST00000628979 ZNF589Q86UQ0 364 aaPredicted RBP24.62■■□□□ 1.53
CIRBP-246ENST00000628979 ZNF444Q8N0Y2 327 aaPredicted RBP24.62■■□□□ 1.53
CIRBP-246ENST00000628979 DIAPH3Q9NSV4 1193 aa24.62■■□□□ 1.53
CIRBP-246ENST00000628979 PTCH2Q9Y6C5 1203 aa24.62■■□□□ 1.53
CIRBP-246ENST00000628979 ROBO3Q96MS0 1386 aa24.62■■□□□ 1.53
CIRBP-246ENST00000628979 USP17L15C9J2P7 530 aa24.61■■□□□ 1.53
CIRBP-246ENST00000628979 USP17L13C9JLJ4 530 aa24.61■■□□□ 1.53
CIRBP-246ENST00000628979 USP17L11C9JVI0 530 aa24.61■■□□□ 1.53
CIRBP-246ENST00000628979 USP17L18D6R9N7 530 aa24.61■■□□□ 1.53
CIRBP-246ENST00000628979 USP17L22D6RA61 530 aa24.61■■□□□ 1.53
CIRBP-246ENST00000628979 USP17L17D6RBQ6 530 aa24.61■■□□□ 1.53
CIRBP-246ENST00000628979 USP17L19D6RCP7 530 aa24.61■■□□□ 1.53
CIRBP-246ENST00000628979 USP17L20D6RJB6 530 aa24.61■■□□□ 1.53
CIRBP-246ENST00000628979 VCAM1P19320 739 aa24.61■■□□□ 1.53
CIRBP-246ENST00000628979 HERVK_113P62684 666 aa24.61■■□□□ 1.53
CIRBP-246ENST00000628979 CTDSPL2Q05D32 466 aa24.61■■□□□ 1.53
CIRBP-246ENST00000628979 USP17L24Q0WX57 530 aa24.61■■□□□ 1.53
CIRBP-246ENST00000628979 TTC22Q5TAA0 569 aa24.61■■□□□ 1.53
CIRBP-246ENST00000628979 CWC27Q6UX04 472 aaKnown RBP24.61■■□□□ 1.53
CIRBP-246ENST00000628979 SIAH1Q8IUQ4 282 aa24.61■■□□□ 1.53
CIRBP-246ENST00000628979 RPAP3Q9H6T3 665 aaPredicted RBP24.61■■□□□ 1.53
CIRBP-246ENST00000628979 ZNF287Q9HBT7 754 aa24.61■■□□□ 1.53
CIRBP-246ENST00000628979 MGAMO43451 1857 aa24.6■■□□□ 1.53
CIRBP-246ENST00000628979 PEX10O60683 326 aa24.6■■□□□ 1.53
CIRBP-246ENST00000628979 GNRH1P01148 92 aa24.6■■□□□ 1.53
CIRBP-246ENST00000628979 EEF2P13639 858 aaKnown RBP24.6■■□□□ 1.53
CIRBP-246ENST00000628979 HOXD10P28358 340 aa24.6■■□□□ 1.53
CIRBP-246ENST00000628979 PDE4BQ07343 736 aa24.6■■□□□ 1.53
CIRBP-246ENST00000628979 KANSL2Q9H9L4 492 aa24.6■■□□□ 1.53
CIRBP-246ENST00000628979 CCDC171Q6TFL3 1326 aa24.6■■□□□ 1.53
CIRBP-246ENST00000628979 RAD21O60216 631 aa24.59■■□□□ 1.53
CIRBP-246ENST00000628979 GSPT1P15170 499 aaKnown RBP24.59■■□□□ 1.53
CIRBP-246ENST00000628979 FAM110CQ1W6H9 321 aa24.59■■□□□ 1.53
CIRBP-246ENST00000628979 CATSPERGQ6ZRH7 1159 aa24.59■■□□□ 1.53
CIRBP-246ENST00000628979 PAGR1Q9BTK6 254 aa24.59■■□□□ 1.53
CIRBP-246ENST00000628979 SH2D4AQ9H788 454 aa24.59■■□□□ 1.53
CIRBP-246ENST00000628979 HIP1O00291 1037 aa24.58■■□□□ 1.53
CIRBP-246ENST00000628979 HSPD1P10809 573 aaKnown RBP24.58■■□□□ 1.53
CIRBP-246ENST00000628979 MFAP1P55081 439 aaKnown RBP24.58■■□□□ 1.53
CIRBP-246ENST00000628979 SOX10P56693 466 aa24.58■■□□□ 1.53
CIRBP-246ENST00000628979 SPICE1Q8N0Z3 855 aa24.58■■□□□ 1.53
CIRBP-246ENST00000628979 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.58■■□□□ 1.53
CIRBP-246ENST00000628979 SRRDQ9UH36 339 aa24.58■■□□□ 1.53
CIRBP-246ENST00000628979 TMX2Q9Y320 296 aa24.58■■□□□ 1.53
CIRBP-246ENST00000628979 MYPNQ86TC9 1320 aa24.58■■□□□ 1.52
CIRBP-246ENST00000628979 TNPO2O14787 897 aaKnown RBP24.57■■□□□ 1.52
CIRBP-246ENST00000628979 FGAP02671 866 aa24.57■■□□□ 1.52
CIRBP-246ENST00000628979 FAM47AQ5JRC9 791 aa24.57■■□□□ 1.52
CIRBP-246ENST00000628979 KIAA1755Q5JYT7 1200 aa24.57■■□□□ 1.52
CIRBP-246ENST00000628979 TANGO6Q9C0B7 1094 aa24.57■■□□□ 1.52
CIRBP-246ENST00000628979 INCENPQ9NQS7 918 aa24.57■■□□□ 1.52
CIRBP-246ENST00000628979 PRMT2P55345 433 aa24.56■■□□□ 1.52
CIRBP-246ENST00000628979 ALX1Q15699 326 aa24.56■■□□□ 1.52
CIRBP-246ENST00000628979 SLC9C1Q4G0N8 1177 aa24.56■■□□□ 1.52
CIRBP-246ENST00000628979 RAET1EQ8TD07 263 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms