RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 ADGRA1Q86SQ6 560 aa9.44□□□□□ -0.9
TCF4-260ENST00000627685 ZFPM1Q8IX07 1006 aa9.44□□□□□ -0.9
TCF4-260ENST00000627685 FTSJ3Q8IY81 847 aaKnown RBP9.44□□□□□ -0.9
TCF4-260ENST00000627685 CLMNQ96JQ2 1002 aa9.44□□□□□ -0.9
TCF4-260ENST00000627685 TMEM39BQ9GZU3 492 aa9.44□□□□□ -0.9
TCF4-260ENST00000627685 PPP2R3BQ9Y5P8 575 aa9.44□□□□□ -0.9
TCF4-260ENST00000627685 UNCXA6NJT0 531 aa9.43□□□□□ -0.9
TCF4-260ENST00000627685 USP2O75604 605 aaPredicted RBP9.43□□□□□ -0.9
TCF4-260ENST00000627685 WDHD1O75717 1129 aaPredicted RBP9.43□□□□□ -0.9
TCF4-260ENST00000627685 NF2P35240 595 aa9.43□□□□□ -0.9
TCF4-260ENST00000627685 ZNF157P51786 506 aaPredicted RBP9.43□□□□□ -0.9
TCF4-260ENST00000627685 KIF23Q02241 960 aaPredicted RBP9.43□□□□□ -0.9
TCF4-260ENST00000627685 FKBP1CQ5VVH2 108 aa9.43□□□□□ -0.9
TCF4-260ENST00000627685 PPP2R2DQ66LE6 453 aa9.43□□□□□ -0.9
TCF4-260ENST00000627685 CDC42EP5Q6NZY7 148 aa9.43□□□□□ -0.9
TCF4-260ENST00000627685 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.43□□□□□ -0.9
TCF4-260ENST00000627685 ZNF511Q8NB15 262 aa9.43□□□□□ -0.9
TCF4-260ENST00000627685 WDR66Q8TBY9 1149 aa9.43□□□□□ -0.9
TCF4-260ENST00000627685 ZNF512BQ96KM6 892 aaPredicted RBP9.43□□□□□ -0.9
TCF4-260ENST00000627685 DDX4Q9NQI0 724 aaKnown RBP9.43□□□□□ -0.9
TCF4-260ENST00000627685 EXOC6BQ9Y2D4 811 aa9.43□□□□□ -0.9
TCF4-260ENST00000627685 COL2A1P02458 1487 aaPredicted RBP9.42□□□□□ -0.9
TCF4-260ENST00000627685 MROH7-TTC4A0A0A0MT08 1334 aa9.42□□□□□ -0.9
TCF4-260ENST00000627685 MYO1BO43795 1136 aa9.42□□□□□ -0.9
TCF4-260ENST00000627685 AP1G2O75843 785 aa9.42□□□□□ -0.9
TCF4-260ENST00000627685 CYP2E1P05181 493 aaPredicted RBP9.42□□□□□ -0.9
TCF4-260ENST00000627685 CAP1Q01518 475 aa9.42□□□□□ -0.9
TCF4-260ENST00000627685 MECOMQ03112 1051 aa9.42□□□□□ -0.9
TCF4-260ENST00000627685 GRM1Q13255 1194 aa9.42□□□□□ -0.9
TCF4-260ENST00000627685 TBC1D9Q6ZT07 1266 aa9.42□□□□□ -0.9
TCF4-260ENST00000627685 FAM83AQ86UY5 434 aa9.42□□□□□ -0.9
TCF4-260ENST00000627685 VPS37DQ86XT2 251 aa9.42□□□□□ -0.9
TCF4-260ENST00000627685 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.42□□□□□ -0.9
TCF4-260ENST00000627685 TEKT1Q969V4 418 aa9.42□□□□□ -0.9
TCF4-260ENST00000627685 NSUN4Q96CB9 384 aaKnown RBP9.42□□□□□ -0.9
TCF4-260ENST00000627685 CSRNP1Q96S65 589 aa9.42□□□□□ -0.9
TCF4-260ENST00000627685 GOPCQ9HD26 462 aa9.42□□□□□ -0.9
TCF4-260ENST00000627685 PIH1D3Q9NQM4 214 aaKnown RBP9.42□□□□□ -0.9
TCF4-260ENST00000627685 SAGE1Q9NXZ1 904 aa9.42□□□□□ -0.9
TCF4-260ENST00000627685 DENND2AQ9ULE3 1009 aa9.42□□□□□ -0.9
TCF4-260ENST00000627685 HTTP42858 3142 aa9.42□□□□□ -0.9
TCF4-260ENST00000627685 TCP10L2B9ZVM9 353 aa9.41□□□□□ -0.9
TCF4-260ENST00000627685 J3QL48 77 aa9.41□□□□□ -0.9
TCF4-260ENST00000627685 SURF6O75683 361 aaKnown RBP9.41□□□□□ -0.9
TCF4-260ENST00000627685 RRP1P56182 461 aaKnown RBP9.41□□□□□ -0.9
TCF4-260ENST00000627685 ARMC9Q7Z3E5 817 aa9.41□□□□□ -0.9
TCF4-260ENST00000627685 SPATA5Q8NB90 893 aa9.41□□□□□ -0.9
TCF4-260ENST00000627685 R3HDMLQ9H3Y0 253 aa9.41□□□□□ -0.9
TCF4-260ENST00000627685 VEZTQ9HBM0 779 aa9.41□□□□□ -0.9
TCF4-260ENST00000627685 DDX19BQ9UMR2 479 aa9.41□□□□□ -0.9
TCF4-260ENST00000627685 SNCAIPQ9Y6H5 919 aa9.41□□□□□ -0.9
TCF4-260ENST00000627685 NDUFB9Q9Y6M9 179 aa9.41□□□□□ -0.9
TCF4-260ENST00000627685 MYO5AQ9Y4I1 1855 aaKnown RBP9.4□□□□□ -0.9
TCF4-260ENST00000627685 FOCADQ5VW36 1801 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 MAST3O60307 1309 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 GPR75-ASB3A0A0A6YYF3 556 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 SMPD1P17405 629 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 ZAP70P43403 619 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 MAP3K10Q02779 954 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 TNFAIP1Q13829 316 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 PRKG1Q13976 671 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 SUPT20HL1Q3ZLR7 823 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 RHPN1Q8TCX5 695 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 LRRN4Q8WUT4 740 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 CFHR5Q9BXR6 569 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 IDI2Q9BXS1 227 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 ANTXR1Q9H6X2 564 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 ZNF112Q9UJU3 913 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 AKAP2Q9Y2D5 859 aa9.4□□□□□ -0.9
TCF4-260ENST00000627685 CDK5RAP2Q96SN8 1893 aa9.4□□□□□ -0.91
TCF4-260ENST00000627685 SALL3Q9BXA9 1300 aa9.39□□□□□ -0.91
TCF4-260ENST00000627685 IGF2BP3O00425 579 aaKnown RBP eCLIP9.39□□□□□ -0.91
TCF4-260ENST00000627685 PPP1R12BO60237 982 aaPredicted RBP9.39□□□□□ -0.91
TCF4-260ENST00000627685 ALDH1A1P00352 501 aa9.39□□□□□ -0.91
TCF4-260ENST00000627685 CHGBP05060 677 aa9.39□□□□□ -0.91
TCF4-260ENST00000627685 LDHBP07195 334 aaKnown RBP9.39□□□□□ -0.91
TCF4-260ENST00000627685 TM4SF4P48230 202 aa9.39□□□□□ -0.91
TCF4-260ENST00000627685 G3BP1Q13283 466 aaKnown RBP eCLIP9.39□□□□□ -0.91
TCF4-260ENST00000627685 MOGSQ13724 837 aa9.39□□□□□ -0.91
TCF4-260ENST00000627685 VGLL4Q14135 290 aa9.39□□□□□ -0.91
TCF4-260ENST00000627685 RRP1BQ14684 758 aaKnown RBP9.39□□□□□ -0.91
TCF4-260ENST00000627685 AGERQ15109 404 aa9.39□□□□□ -0.91
TCF4-260ENST00000627685 RPAP2Q8IXW5 612 aaPredicted RBP9.39□□□□□ -0.91
TCF4-260ENST00000627685 WNK4Q96J92 1243 aa9.39□□□□□ -0.91
TCF4-260ENST00000627685 PTPN18Q99952 460 aa9.39□□□□□ -0.91
TCF4-260ENST00000627685 CCDC8Q9H0W5 538 aaPredicted RBP9.39□□□□□ -0.91
TCF4-260ENST00000627685 IL1RAPL2Q9NP60 686 aa9.39□□□□□ -0.91
TCF4-260ENST00000627685 SNRKQ9NRH2 765 aa9.39□□□□□ -0.91
TCF4-260ENST00000627685 RNF186Q9NXI6 227 aa9.39□□□□□ -0.91
TCF4-260ENST00000627685 ANGEL1Q9UNK9 670 aaKnown RBP9.39□□□□□ -0.91
TCF4-260ENST00000627685 DDTLA6NHG4 134 aaPredicted RBP9.38□□□□□ -0.91
TCF4-260ENST00000627685 PHF20L1A8MW92 1017 aa9.38□□□□□ -0.91
TCF4-260ENST00000627685 FRAT2O75474 233 aaPredicted RBP9.38□□□□□ -0.91
TCF4-260ENST00000627685 RFC5P40937 340 aa9.38□□□□□ -0.91
TCF4-260ENST00000627685 RBM5P52756 815 aaKnown RBP eCLIP9.38□□□□□ -0.91
TCF4-260ENST00000627685 NOM1Q5C9Z4 860 aaKnown RBP9.38□□□□□ -0.91
TCF4-260ENST00000627685 ARMC2Q8NEN0 867 aa9.38□□□□□ -0.91
TCF4-260ENST00000627685 FAM151AQ8WW52 585 aa9.38□□□□□ -0.91
TCF4-260ENST00000627685 FOXJ1Q92949 421 aa9.38□□□□□ -0.91
TCF4-260ENST00000627685 NEUROD6Q96NK8 337 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms