RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 CCDC17Q96LX7 622 aa10.06□□□□□ -0.8
CHD2-211ENST00000627460 IDI2Q9BXS1 227 aa10.06□□□□□ -0.8
CHD2-211ENST00000627460 PDGFDQ9GZP0 370 aaPredicted RBP10.06□□□□□ -0.8
CHD2-211ENST00000627460 SCAND2PQ9GZW5 306 aaPredicted RBP10.06□□□□□ -0.8
CHD2-211ENST00000627460 EHD4Q9H223 541 aa10.06□□□□□ -0.8
CHD2-211ENST00000627460 USP40Q9NVE5 1235 aa10.06□□□□□ -0.8
CHD2-211ENST00000627460 CFAP45Q9UL16 551 aa10.06□□□□□ -0.8
CHD2-211ENST00000627460 FOCADQ5VW36 1801 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 MYO1BO43795 1136 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 ENTPD3O75355 529 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 VIL1P09327 827 aaKnown RBP10.05□□□□□ -0.8
CHD2-211ENST00000627460 USP17L8P0C7I0 530 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 POTEIP0CG38 1075 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 IFNAR1P17181 557 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 RBM5P52756 815 aaKnown RBP eCLIP10.05□□□□□ -0.8
CHD2-211ENST00000627460 CCT2P78371 535 aaKnown RBP10.05□□□□□ -0.8
CHD2-211ENST00000627460 KRT85P78386 507 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 SSRP1Q08945 709 aaKnown RBP10.05□□□□□ -0.8
CHD2-211ENST00000627460 SEC23AQ15436 765 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 MCTP1Q6DN14 999 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 OLFM4Q6UX06 510 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 MICU3Q86XE3 530 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 MAPKAPK5Q8IW41 473 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 ZNF654Q8IZM8 581 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 ANKS1AQ92625 1134 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 SYAP1Q96A49 352 aaPredicted RBP10.05□□□□□ -0.8
CHD2-211ENST00000627460 LZTS2Q9BRK4 669 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 TRIM34Q9BYJ4 488 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 KAT14Q9H8E8 782 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 ORC3Q9UBD5 711 aaPredicted RBP10.05□□□□□ -0.8
CHD2-211ENST00000627460 BRPF3Q9ULD4 1205 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 MTMR6Q9Y217 621 aa10.05□□□□□ -0.8
CHD2-211ENST00000627460 BAZ2AQ9UIF9 1905 aaKnown RBP10.05□□□□□ -0.8
CHD2-211ENST00000627460 F8W031 263 aaPredicted RBP10.04□□□□□ -0.8
CHD2-211ENST00000627460 DEXIO95424 95 aa10.04□□□□□ -0.8
CHD2-211ENST00000627460 OSBPP22059 807 aa10.04□□□□□ -0.8
CHD2-211ENST00000627460 ST3GAL1Q11201 340 aa10.04□□□□□ -0.8
CHD2-211ENST00000627460 SAFBQ15424 915 aaKnown RBP eCLIP10.04□□□□□ -0.8
CHD2-211ENST00000627460 GRIK5Q16478 980 aa10.04□□□□□ -0.8
CHD2-211ENST00000627460 FKBP1CQ5VVH2 108 aa10.04□□□□□ -0.8
CHD2-211ENST00000627460 BRAPQ7Z569 592 aa10.04□□□□□ -0.8
CHD2-211ENST00000627460 KIAA0825Q8IV33 1275 aa10.04□□□□□ -0.8
CHD2-211ENST00000627460 FOXP4Q8IVH2 680 aaPredicted RBP10.04□□□□□ -0.8
CHD2-211ENST00000627460 ENAHQ8N8S7 591 aaPredicted RBP10.04□□□□□ -0.8
CHD2-211ENST00000627460 FANCBQ8NB91 859 aa10.04□□□□□ -0.8
CHD2-211ENST00000627460 TMEM87AQ8NBN3 555 aa10.04□□□□□ -0.8
CHD2-211ENST00000627460 MTMR14Q8NCE2 650 aa10.04□□□□□ -0.8
CHD2-211ENST00000627460 C8orf76Q96K31 380 aa10.04□□□□□ -0.8
CHD2-211ENST00000627460 ZNF396Q96N95 335 aaPredicted RBP10.04□□□□□ -0.8
CHD2-211ENST00000627460 RNF26Q9BY78 433 aaPredicted RBP10.04□□□□□ -0.8
CHD2-211ENST00000627460 OSBPL5Q9H0X9 879 aaPredicted RBP10.04□□□□□ -0.8
CHD2-211ENST00000627460 PPP1R1BQ9UD71 204 aaPredicted RBP10.04□□□□□ -0.8
CHD2-211ENST00000627460 SERPINB13Q9UIV8 391 aa10.04□□□□□ -0.8
CHD2-211ENST00000627460 ISY1Q9ULR0 285 aaKnown RBP10.04□□□□□ -0.8
CHD2-211ENST00000627460 HPS5Q9UPZ3 1129 aa10.04□□□□□ -0.8
CHD2-211ENST00000627460 ZDHHC9Q9Y397 364 aa10.04□□□□□ -0.8
CHD2-211ENST00000627460 DDX60LQ5H9U9 1706 aaKnown RBP10.04□□□□□ -0.8
CHD2-211ENST00000627460 PLIN4Q96Q06 1357 aa10.03□□□□□ -0.8
CHD2-211ENST00000627460 GRXCR2A6NFK2 248 aa10.03□□□□□ -0.8
CHD2-211ENST00000627460 TRAK2O60296 914 aa10.03□□□□□ -0.8
CHD2-211ENST00000627460 WDHD1O75717 1129 aaPredicted RBP10.03□□□□□ -0.8
CHD2-211ENST00000627460 FMNL1O95466 1100 aaPredicted RBP10.03□□□□□ -0.8
CHD2-211ENST00000627460 BRCA1P38398 1863 aaKnown RBP10.03□□□□□ -0.8
CHD2-211ENST00000627460 CDK8P49336 464 aa10.03□□□□□ -0.8
CHD2-211ENST00000627460 SCNN1DP51172 638 aa10.03□□□□□ -0.8
CHD2-211ENST00000627460 TFAP4Q01664 338 aa10.03□□□□□ -0.8
CHD2-211ENST00000627460 PKP1Q13835 747 aa10.03□□□□□ -0.8
CHD2-211ENST00000627460 DLGAP5Q15398 846 aa10.03□□□□□ -0.8
CHD2-211ENST00000627460 KLHL40Q2TBA0 621 aa10.03□□□□□ -0.8
CHD2-211ENST00000627460 CIAPIN1Q6FI81 312 aa10.03□□□□□ -0.8
CHD2-211ENST00000627460 APOBEC3HQ6NTF7 200 aaKnown RBP10.03□□□□□ -0.8
CHD2-211ENST00000627460 CDC42EP5Q6NZY7 148 aa10.03□□□□□ -0.8
CHD2-211ENST00000627460 KRI1Q8N9T8 703 aaKnown RBP10.03□□□□□ -0.8
CHD2-211ENST00000627460 NEDD1Q8NHV4 660 aa10.03□□□□□ -0.8
CHD2-211ENST00000627460 PI4KBQ9UBF8 816 aa10.03□□□□□ -0.8
CHD2-211ENST00000627460 METRNQ9UJH8 293 aa10.03□□□□□ -0.8
CHD2-211ENST00000627460 MYH1P12882 1939 aa10.02□□□□□ -0.81
CHD2-211ENST00000627460 CYP2D7A0A087X1C5 515 aa10.02□□□□□ -0.81
CHD2-211ENST00000627460 JAK2O60674 1132 aa10.02□□□□□ -0.81
CHD2-211ENST00000627460 TNNI2P48788 182 aa10.02□□□□□ -0.81
CHD2-211ENST00000627460 EIF6P56537 245 aaKnown RBP10.02□□□□□ -0.81
CHD2-211ENST00000627460 GNL2Q13823 731 aaKnown RBP10.02□□□□□ -0.81
CHD2-211ENST00000627460 TNFAIP1Q13829 316 aa10.02□□□□□ -0.81
CHD2-211ENST00000627460 SLC51AQ86UW1 340 aa10.02□□□□□ -0.81
CHD2-211ENST00000627460 CRACR2BQ8N4Y2 399 aaPredicted RBP10.02□□□□□ -0.81
CHD2-211ENST00000627460 FBXO18Q8NFZ0 1043 aa10.02□□□□□ -0.81
CHD2-211ENST00000627460 NUP133Q8WUM0 1156 aa10.02□□□□□ -0.81
CHD2-211ENST00000627460 PTCD2Q8WV60 388 aaKnown RBP10.02□□□□□ -0.81
CHD2-211ENST00000627460 DDX11Q96FC9 970 aa10.02□□□□□ -0.81
CHD2-211ENST00000627460 NCOA5Q9HCD5 579 aaKnown RBP10.02□□□□□ -0.81
CHD2-211ENST00000627460 BRMS1Q9HCU9 246 aa10.02□□□□□ -0.81
CHD2-211ENST00000627460 ZNF277Q9NRM2 450 aaPredicted RBP10.02□□□□□ -0.81
CHD2-211ENST00000627460 HERC5Q9UII4 1024 aaKnown RBP10.02□□□□□ -0.81
CHD2-211ENST00000627460 BCS1LQ9Y276 419 aa10.02□□□□□ -0.81
CHD2-211ENST00000627460 DDX49Q9Y6V7 483 aaKnown RBP10.02□□□□□ -0.81
CHD2-211ENST00000627460 ELP1O95163 1332 aa10.02□□□□□ -0.81
CHD2-211ENST00000627460 FER1L6Q2WGJ9 1857 aa10.02□□□□□ -0.81
CHD2-211ENST00000627460 CDK5RAP2Q96SN8 1893 aa10.02□□□□□ -0.81
CHD2-211ENST00000627460 ATRNL1Q5VV63 1379 aa10.01□□□□□ -0.81
CHD2-211ENST00000627460 ECM29Q5VYK3 1845 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms