RNA–Protein interactions for RNA: ENST00000625410.1

LINC01943-201, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 2 BASIC

Gene LINC01943, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-201ENST00000625410 SERPINA10Q9UK55 444 aa11.51□□□□□ -0.57
LINC01943-201ENST00000625410 ERICH2A1L162 156 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 DDTLA6NHG4 134 aaPredicted RBP11.5□□□□□ -0.57
LINC01943-201ENST00000625410 TSPY2A6NKD2 308 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 CPLX1O14810 134 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 AKR1B1P15121 316 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 SHROOM1Q2M3G4 852 aaPredicted RBP11.5□□□□□ -0.57
LINC01943-201ENST00000625410 CFAP100Q494V2 611 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 DALRD3Q5D0E6 543 aaKnown RBP11.5□□□□□ -0.57
LINC01943-201ENST00000625410 KRT40Q6A162 431 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 IQCA1Q86XH1 822 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 GAS2L3Q86XJ1 694 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 DGKHQ86XP1 1220 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 LARGE2Q8N3Y3 721 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 SRBD1Q8N5C6 995 aaKnown RBP11.5□□□□□ -0.57
LINC01943-201ENST00000625410 NUP133Q8WUM0 1156 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 LEO1Q8WVC0 666 aaPredicted RBP11.5□□□□□ -0.57
LINC01943-201ENST00000625410 CHMP4CQ96CF2 233 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 PGBD1Q96JS3 809 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 C8orf76Q96K31 380 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 PRMT6Q96LA8 375 aaPredicted RBP11.5□□□□□ -0.57
LINC01943-201ENST00000625410 USP28Q96RU2 1077 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 SLC26A6Q9BXS9 759 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 ZSCAN16Q9H4T2 348 aaPredicted RBP11.5□□□□□ -0.57
LINC01943-201ENST00000625410 TFIP11Q9UBB9 837 aaKnown RBP11.5□□□□□ -0.57
LINC01943-201ENST00000625410 BCS1LQ9Y276 419 aa11.5□□□□□ -0.57
LINC01943-201ENST00000625410 DDX49Q9Y6V7 483 aaKnown RBP11.5□□□□□ -0.57
LINC01943-201ENST00000625410 COL2A1P02458 1487 aaPredicted RBP11.5□□□□□ -0.57
LINC01943-201ENST00000625410 H3BQV1 296 aa11.49□□□□□ -0.57
LINC01943-201ENST00000625410 CAPN15O75808 1086 aa11.49□□□□□ -0.57
LINC01943-201ENST00000625410 CDKL5O76039 1030 aa11.49□□□□□ -0.57
LINC01943-201ENST00000625410 VEGFAP15692 232 aaPredicted RBP11.49□□□□□ -0.57
LINC01943-201ENST00000625410 DEKP35659 375 aaKnown RBP11.49□□□□□ -0.57
LINC01943-201ENST00000625410 CXCL9Q07325 125 aa11.49□□□□□ -0.57
LINC01943-201ENST00000625410 GRM4Q14833 912 aa11.49□□□□□ -0.57
LINC01943-201ENST00000625410 NPY5RQ15761 445 aa11.49□□□□□ -0.57
LINC01943-201ENST00000625410 METTL16Q86W50 562 aaKnown RBP11.49□□□□□ -0.57
LINC01943-201ENST00000625410 TMEM47Q9BQJ4 181 aa11.49□□□□□ -0.57
LINC01943-201ENST00000625410 EHD4Q9H223 541 aa11.49□□□□□ -0.57
LINC01943-201ENST00000625410 ZBTB12Q9Y330 459 aaPredicted RBP11.49□□□□□ -0.57
LINC01943-201ENST00000625410 ELP1O95163 1332 aa11.49□□□□□ -0.57
LINC01943-201ENST00000625410 MYO3BQ8WXR4 1341 aa11.49□□□□□ -0.57
LINC01943-201ENST00000625410 LTBP3Q9NS15 1303 aa11.49□□□□□ -0.57
LINC01943-201ENST00000625410 ATRNL1Q5VV63 1379 aa11.49□□□□□ -0.57
LINC01943-201ENST00000625410 ARFGEF1Q9Y6D6 1849 aa11.49□□□□□ -0.57
LINC01943-201ENST00000625410 SHTN1A0MZ66 631 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 SPDYE2BA6NHP3 402 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 ADAMTS3O15072 1205 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 SPDYE6P0CI01 402 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 KRT85P78386 507 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 RASSF7Q02833 373 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 SSRP1Q08945 709 aaKnown RBP11.48□□□□□ -0.57
LINC01943-201ENST00000625410 RRP1BQ14684 758 aaKnown RBP11.48□□□□□ -0.57
LINC01943-201ENST00000625410 SOGA3Q5TF21 947 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 CAVIN1Q6NZI2 390 aaKnown RBP11.48□□□□□ -0.57
LINC01943-201ENST00000625410 ARHGAP27Q6ZUM4 889 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 CATIPQ7Z7H3 387 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 CLEC10AQ8IUN9 316 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 STAG2Q8N3U4 1231 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 CEP95Q96GE4 821 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 RNF26Q9BY78 433 aaPredicted RBP11.48□□□□□ -0.57
LINC01943-201ENST00000625410 TDRD3Q9H7E2 651 aaKnown RBP11.48□□□□□ -0.57
LINC01943-201ENST00000625410 MKNK2Q9HBH9 465 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 NMRK2Q9NPI5 230 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 PGAP2Q9UHJ9 254 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 MAD2L2Q9UI95 211 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 ZNRF3Q9ULT6 936 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 KIF3AQ9Y496 699 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 ATP6V1DQ9Y5K8 247 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 CNTNAP1P78357 1384 aa11.48□□□□□ -0.57
LINC01943-201ENST00000625410 hCG_1642624A0A1W2PR95 340 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 FAM196BA6NMK8 535 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 PRPF3O43395 683 aaKnown RBP11.47□□□□□ -0.57
LINC01943-201ENST00000625410 MBD3O95983 291 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 TSPY3P0CV98 308 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 TSPY8P0CW00 308 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 U2AF2P26368 475 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC01943-201ENST00000625410 ZNF445P59923 1031 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 UBE2HP62256 183 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 JAG1P78504 1218 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 PPP2R5BQ15173 497 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 ZSCAN23Q3MJ62 389 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 MYSM1Q5VVJ2 828 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 SYNE3Q6ZMZ3 975 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 ZNF444Q8N0Y2 327 aaPredicted RBP11.47□□□□□ -0.57
LINC01943-201ENST00000625410 MTMR14Q8NCE2 650 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 PNMA1Q8ND90 353 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 RBM46Q8TBY0 533 aaKnown RBP11.47□□□□□ -0.57
LINC01943-201ENST00000625410 MAP3K14Q99558 947 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 TAOK3Q9H2K8 898 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 RBM28Q9NW13 759 aaKnown RBP11.47□□□□□ -0.57
LINC01943-201ENST00000625410 RCOR1Q9UKL0 485 aa11.47□□□□□ -0.57
LINC01943-201ENST00000625410 PALM3A6NDB9 673 aaPredicted RBP11.46□□□□□ -0.57
LINC01943-201ENST00000625410 CYTH3O43739 400 aa11.46□□□□□ -0.57
LINC01943-201ENST00000625410 DEXIO95424 95 aa11.46□□□□□ -0.57
LINC01943-201ENST00000625410 CALM1P0DP23 149 aa11.46□□□□□ -0.57
LINC01943-201ENST00000625410 CALM2P0DP24 149 aa11.46□□□□□ -0.57
LINC01943-201ENST00000625410 CALM3P0DP25 149 aa11.46□□□□□ -0.57
LINC01943-201ENST00000625410 LIG1P18858 919 aa11.46□□□□□ -0.57
LINC01943-201ENST00000625410 NCLP19338 710 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms