RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SLC6A18Q96N87 628 aa7.21□□□□□ -1.26
CPNE3-213ENST00000622183 EPN3Q9H201 632 aa7.21□□□□□ -1.26
CPNE3-213ENST00000622183 ACSS3Q9H6R3 686 aa7.21□□□□□ -1.26
CPNE3-213ENST00000622183 SUCOQ9UBS9 1254 aaKnown RBP7.21□□□□□ -1.26
CPNE3-213ENST00000622183 ZMYM5Q9UJ78 669 aa7.21□□□□□ -1.26
CPNE3-213ENST00000622183 USP21Q9UK80 565 aa7.21□□□□□ -1.26
CPNE3-213ENST00000622183 PCOLCE2Q9UKZ9 415 aa7.21□□□□□ -1.26
CPNE3-213ENST00000622183 SBNO2Q9Y2G9 1366 aa7.2□□□□□ -1.26
CPNE3-213ENST00000622183 C9orf172C9J069 976 aa7.2□□□□□ -1.26
CPNE3-213ENST00000622183 LRIG2O94898 1065 aa7.2□□□□□ -1.26
CPNE3-213ENST00000622183 GBP1P32455 592 aa7.2□□□□□ -1.26
CPNE3-213ENST00000622183 C2orf27AQ580R0 203 aa7.2□□□□□ -1.26
CPNE3-213ENST00000622183 PLEKHG4Q58EX7 1191 aa7.2□□□□□ -1.26
CPNE3-213ENST00000622183 SPATC1Q76KD6 591 aa7.2□□□□□ -1.26
CPNE3-213ENST00000622183 THAP3Q8WTV1 239 aaPredicted RBP7.2□□□□□ -1.26
CPNE3-213ENST00000622183 NACC1Q96RE7 527 aa7.2□□□□□ -1.26
CPNE3-213ENST00000622183 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.2□□□□□ -1.26
CPNE3-213ENST00000622183 KANSL2Q9H9L4 492 aa7.2□□□□□ -1.26
CPNE3-213ENST00000622183 CNTNAP5Q8WYK1 1306 aa7.2□□□□□ -1.26
CPNE3-213ENST00000622183 SART1O43290 800 aaKnown RBP7.19□□□□□ -1.26
CPNE3-213ENST00000622183 GAS2O43903 313 aaKnown RBP7.19□□□□□ -1.26
CPNE3-213ENST00000622183 SUSD5O60279 629 aa7.19□□□□□ -1.26
CPNE3-213ENST00000622183 DIAPH1O60610 1272 aaKnown RBP7.19□□□□□ -1.26
CPNE3-213ENST00000622183 CDC45O75419 566 aa7.19□□□□□ -1.26
CPNE3-213ENST00000622183 CLSTN1O94985 981 aa7.19□□□□□ -1.26
CPNE3-213ENST00000622183 HMGB1P09429 215 aaKnown RBP7.19□□□□□ -1.26
CPNE3-213ENST00000622183 HSP90B1P14625 803 aaKnown RBP7.19□□□□□ -1.26
CPNE3-213ENST00000622183 GLB1P16278 677 aa7.19□□□□□ -1.26
CPNE3-213ENST00000622183 USP11P51784 963 aa7.19□□□□□ -1.26
CPNE3-213ENST00000622183 SSRP1Q08945 709 aaKnown RBP7.19□□□□□ -1.26
CPNE3-213ENST00000622183 SLC10A6Q3KNW5 377 aa7.19□□□□□ -1.26
CPNE3-213ENST00000622183 MFSD2AQ8NA29 543 aa7.19□□□□□ -1.26
CPNE3-213ENST00000622183 BAHD1Q8TBE0 780 aaPredicted RBP7.19□□□□□ -1.26
CPNE3-213ENST00000622183 FAM46AQ96IP4 442 aaKnown RBP7.19□□□□□ -1.26
CPNE3-213ENST00000622183 TMEM260Q9NX78 707 aa7.19□□□□□ -1.26
CPNE3-213ENST00000622183 PFDN2Q9UHV9 154 aa7.19□□□□□ -1.26
CPNE3-213ENST00000622183 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.19□□□□□ -1.26
CPNE3-213ENST00000622183 ADAMTS8Q9UP79 889 aa7.19□□□□□ -1.26
CPNE3-213ENST00000622183 CLEC3AO75596 197 aa7.18□□□□□ -1.26
CPNE3-213ENST00000622183 RAB6AP20340 208 aa7.18□□□□□ -1.26
CPNE3-213ENST00000622183 COL8A1P27658 744 aa7.18□□□□□ -1.26
CPNE3-213ENST00000622183 NOS3P29474 1203 aa7.18□□□□□ -1.26
CPNE3-213ENST00000622183 ZNF143P52747 638 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-213ENST00000622183 SQSTM1Q13501 440 aa7.18□□□□□ -1.26
CPNE3-213ENST00000622183 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-213ENST00000622183 PPFIBP1Q86W92 1011 aa7.18□□□□□ -1.26
CPNE3-213ENST00000622183 HOMER1Q86YM7 354 aa7.18□□□□□ -1.26
CPNE3-213ENST00000622183 DNAJB8Q8NHS0 232 aa7.18□□□□□ -1.26
CPNE3-213ENST00000622183 PPP1R13LQ8WUF5 828 aa7.18□□□□□ -1.26
CPNE3-213ENST00000622183 WFDC12Q8WWY7 111 aa7.18□□□□□ -1.26
CPNE3-213ENST00000622183 APPBP2Q92624 585 aa7.18□□□□□ -1.26
CPNE3-213ENST00000622183 SMARCC1Q92922 1105 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-213ENST00000622183 UBL7Q96S82 380 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-213ENST00000622183 YIPF2Q9BWQ6 316 aa7.18□□□□□ -1.26
CPNE3-213ENST00000622183 FANCLQ9NW38 375 aa7.18□□□□□ -1.26
CPNE3-213ENST00000622183 KDM2BQ8NHM5 1336 aa7.18□□□□□ -1.26
CPNE3-213ENST00000622183 ESYT3A0FGR9 886 aa7.17□□□□□ -1.26
CPNE3-213ENST00000622183 IQCA1LA6NCM1 817 aa7.17□□□□□ -1.26
CPNE3-213ENST00000622183 APBA3O96018 575 aa7.17□□□□□ -1.26
CPNE3-213ENST00000622183 NAT2P11245 290 aa7.17□□□□□ -1.26
CPNE3-213ENST00000622183 IREB2P48200 963 aaKnown RBP7.17□□□□□ -1.26
CPNE3-213ENST00000622183 MBTPS1Q14703 1052 aa7.17□□□□□ -1.26
CPNE3-213ENST00000622183 UVSSAQ2YD98 709 aa7.17□□□□□ -1.26
CPNE3-213ENST00000622183 CDPF1Q6NVV7 123 aa7.17□□□□□ -1.26
CPNE3-213ENST00000622183 XAGE3Q8WTP9 111 aa7.17□□□□□ -1.26
CPNE3-213ENST00000622183 EZH1Q92800 747 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-213ENST00000622183 SCARF2Q96GP6 870 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-213ENST00000622183 SEMA6CQ9H3T2 930 aa7.17□□□□□ -1.26
CPNE3-213ENST00000622183 SUSD2Q9UGT4 822 aa7.17□□□□□ -1.26
CPNE3-213ENST00000622183 LEMD3Q9Y2U8 911 aa7.17□□□□□ -1.26
CPNE3-213ENST00000622183 DAGLAQ9Y4D2 1042 aa7.17□□□□□ -1.26
CPNE3-213ENST00000622183 KRBA1A5PL33 1030 aa7.16□□□□□ -1.26
CPNE3-213ENST00000622183 ANKRD34BA5PLL1 514 aa7.16□□□□□ -1.26
CPNE3-213ENST00000622183 C9IYK1 514 aa7.16□□□□□ -1.26
CPNE3-213ENST00000622183 NFICP08651 508 aa7.16□□□□□ -1.26
CPNE3-213ENST00000622183 ADGRE1Q14246 886 aa7.16□□□□□ -1.26
CPNE3-213ENST00000622183 TDRD10Q5VZ19 366 aaKnown RBP7.16□□□□□ -1.26
CPNE3-213ENST00000622183 ALYREFQ86V81 257 aaKnown RBP7.16□□□□□ -1.26
CPNE3-213ENST00000622183 DZIP1LQ8IYY4 767 aaKnown RBP7.16□□□□□ -1.26
CPNE3-213ENST00000622183 LRRC47Q8N1G4 583 aaKnown RBP7.16□□□□□ -1.26
CPNE3-213ENST00000622183 FBLIM1Q8WUP2 373 aa7.16□□□□□ -1.26
CPNE3-213ENST00000622183 SGSM3Q96HU1 749 aa7.16□□□□□ -1.26
CPNE3-213ENST00000622183 PSMG3-AS1Q96PY0 264 aa7.16□□□□□ -1.26
CPNE3-213ENST00000622183 HAUS7Q99871 368 aa7.16□□□□□ -1.26
CPNE3-213ENST00000622183 SPATA9Q9BWV2 254 aa7.16□□□□□ -1.26
CPNE3-213ENST00000622183 CEP131Q9UPN4 1083 aa7.16□□□□□ -1.26
CPNE3-213ENST00000622183 COL17A1Q9UMD9 1497 aaPredicted RBP7.16□□□□□ -1.26
CPNE3-213ENST00000622183 TP53P04637 393 aaPredicted RBP7.15□□□□□ -1.26
CPNE3-213ENST00000622183 MAP7Q14244 749 aa7.15□□□□□ -1.26
CPNE3-213ENST00000622183 LONRF2Q1L5Z9 754 aa7.15□□□□□ -1.26
CPNE3-213ENST00000622183 SGO2Q562F6 1265 aa7.15□□□□□ -1.26
CPNE3-213ENST00000622183 AXDND1Q5T1B0 1012 aaPredicted RBP7.15□□□□□ -1.26
CPNE3-213ENST00000622183 LETMD1Q6P1Q0 360 aa7.15□□□□□ -1.26
CPNE3-213ENST00000622183 C16orf86Q6ZW13 317 aa7.15□□□□□ -1.26
CPNE3-213ENST00000622183 KIAA0907Q7Z7F0 614 aaPredicted RBP7.15□□□□□ -1.26
CPNE3-213ENST00000622183 MYRFLQ96LU7 910 aa7.15□□□□□ -1.26
CPNE3-213ENST00000622183 KLHL25Q9H0H3 589 aa7.15□□□□□ -1.26
CPNE3-213ENST00000622183 PTCH2Q9Y6C5 1203 aa7.15□□□□□ -1.26
CPNE3-213ENST00000622183 AGRPO00253 132 aa7.14□□□□□ -1.27
CPNE3-213ENST00000622183 CBFA2T2O43439 604 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms