RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 STX10O60499 249 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 SLFN14P0C7P3 912 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 GYG1P46976 350 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 NT5C2P49902 561 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 DYNLL1P63167 89 aaKnown RBP10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 NR1I3Q14994 352 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 KMT5BQ4FZB7 885 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 CAVIN4Q5BKX8 364 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 SPATA1Q5VX52 437 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 CTR9Q6PD62 1173 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 BARGINQ6ZT62 677 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 TMTC3Q6ZXV5 915 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 SDR42E1Q8WUS8 393 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 FAM84BQ96KN1 310 aaPredicted RBP10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 MED15Q96RN5 788 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 MINPP1Q9UNW1 487 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 NFE2L3Q9Y4A8 694 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 COL24A1Q17RW2 1714 aa10.98□□□□□ -0.65
IGHV3-54-201ENST00000622166 A0A1B0GTH6 734 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 KDM4FA0A1W2PPD8 638 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 SPDYE4A6NLX3 237 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 H2AFXP16104 143 aaPredicted RBP10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 GABPB1Q06547 395 aaPredicted RBP10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 TROAPQ12815 778 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 CUL4BQ13620 913 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 ELF2Q15723 593 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 NPY5RQ15761 445 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 ERFEQ4G0M1 354 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 SBK1Q52WX2 424 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 IFIT1BQ5T764 474 aaKnown RBP10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 SPECC1LQ69YQ0 1117 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 USP49Q70CQ1 688 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 APTXQ7Z2E3 356 aaKnown RBP10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 IQCA1Q86XH1 822 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 CMTR1Q8N1G2 835 aaKnown RBP10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 CCDC82Q8N4S0 544 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 TC2NQ8N9U0 490 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 ZNF384Q8TF68 577 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 ACSBG1Q96GR2 724 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 PAGE5Q96GU1 130 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 BRMS1Q9HCU9 246 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 ABCF2Q9UG63 623 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 PPP2R2CQ9Y2T4 447 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 SPATA31A5Q5VU36 1347 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 SPATA31A7Q8IWB4 1347 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 CNTNAP5Q8WYK1 1306 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 TAF1P21675 1872 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 CCDC88AQ3V6T2 1871 aa10.97□□□□□ -0.65
IGHV3-54-201ENST00000622166 A0A087X0B3 334 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 VWA3AA6NCI4 1184 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 FAM205CA6NFA0 338 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 PLEKHA8P1O95397 391 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 CDK11BP21127 795 aaKnown RBP10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 PBX1P40424 430 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 TRAPPC10P48553 1259 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 ATP2C1P98194 919 aaPredicted RBP10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 DPYDQ12882 1025 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 EARS2Q5JPH6 523 aaKnown RBP10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 TTC38Q5R3I4 469 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 CDKAL1Q5VV42 579 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 FBXO38Q6PIJ6 1188 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 C3orf67Q6ZVT6 689 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 HOMER1Q86YM7 354 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 GRAMD1CQ8IYS0 662 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 NSUN4Q96CB9 384 aaKnown RBP10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 GSDMAQ96QA5 445 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 PANX2Q96RD6 677 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 BAG1Q99933 345 aaPredicted RBP10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 PYM1Q9BRP8 204 aaKnown RBP10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 ATP8A2Q9NTI2 1148 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 VPS54Q9P1Q0 977 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 DNAI1Q9UI46 699 aa10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 IQSEC3Q9UPP2 1182 aaPredicted RBP10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 V9GY48 417 aaPredicted RBP10.96□□□□□ -0.65
IGHV3-54-201ENST00000622166 CNTNAP4Q9C0A0 1308 aa10.95□□□□□ -0.66
IGHV3-54-201ENST00000622166 CYP2D7A0A087X1C5 515 aa10.95□□□□□ -0.66
IGHV3-54-201ENST00000622166 SMIM22K7EJ46 135 aa10.95□□□□□ -0.66
IGHV3-54-201ENST00000622166 TPM1P09493 284 aa10.95□□□□□ -0.66
IGHV3-54-201ENST00000622166 ATP2B1P20020 1258 aa10.95□□□□□ -0.66
IGHV3-54-201ENST00000622166 ZNF827Q17R98 1081 aa10.95□□□□□ -0.66
IGHV3-54-201ENST00000622166 ANKS1AQ92625 1134 aa10.95□□□□□ -0.66
IGHV3-54-201ENST00000622166 DHX58Q96C10 678 aa10.95□□□□□ -0.66
IGHV3-54-201ENST00000622166 CRNKL1Q9BZJ0 848 aaKnown RBP10.95□□□□□ -0.66
IGHV3-54-201ENST00000622166 ANKRD2Q9GZV1 360 aa10.95□□□□□ -0.66
IGHV3-54-201ENST00000622166 PRDM10Q9NQV6 1147 aa10.95□□□□□ -0.66
IGHV3-54-201ENST00000622166 TAOK2Q9UL54 1235 aa10.95□□□□□ -0.66
IGHV3-54-201ENST00000622166 PPP1R3GB7ZBB8 358 aa10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 USP17L12C9JPN9 530 aa10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 USP17L21D6R901 530 aa10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 TADA3O75528 432 aa10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 PRDM1O75626 825 aa10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 CD44P16070 742 aaKnown RBP10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 FECHP22830 423 aa10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 GOLGA8FQ08AF8 430 aa10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 GOLGA8DPQ0D2H9 430 aa10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 E2F4Q16254 413 aa10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 TRMT44Q8IYL2 757 aaKnown RBP10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 KRT222Q8N1A0 295 aa10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 SRBD1Q8N5C6 995 aaKnown RBP10.94□□□□□ -0.66
IGHV3-54-201ENST00000622166 PDILTQ8N807 584 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms