RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 MPHOSPH6Q99547 160 aaKnown RBP10.96□□□□□ -0.65
COL4A6-210ENST00000621266 KRT23Q9C075 422 aa10.96□□□□□ -0.65
COL4A6-210ENST00000621266 EFCC1Q9HA90 598 aa10.96□□□□□ -0.65
COL4A6-210ENST00000621266 GADD45BO75293 160 aaPredicted RBP10.96□□□□□ -0.66
COL4A6-210ENST00000621266 NMIQ13287 307 aaPredicted RBP10.96□□□□□ -0.66
COL4A6-210ENST00000621266 CFAP221Q4G0U5 840 aa10.96□□□□□ -0.66
COL4A6-210ENST00000621266 A0A1W2PP64 1363 aa10.96□□□□□ -0.66
COL4A6-210ENST00000621266 EFCAB13Q8IY85 973 aa10.96□□□□□ -0.66
COL4A6-210ENST00000621266 CCDC105Q8IYK2 499 aa10.96□□□□□ -0.66
COL4A6-210ENST00000621266 MAP3K21Q5TCX8 1036 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 CROCCP2Q86T23 111 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 CCDC13Q8IYE1 715 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 TCP11Q8WWU5 503 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 ZNF215Q9UL58 517 aaPredicted RBP10.95□□□□□ -0.66
COL4A6-210ENST00000621266 SYNRGQ9UMZ2 1314 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 CFAP43Q8NDM7 1665 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 CYP7A1P22680 504 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 BCAP29Q9UHQ4 241 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 SAP30BPQ9UHR5 308 aaKnown RBP10.95□□□□□ -0.66
COL4A6-210ENST00000621266 MAP3K5Q99683 1374 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 VWA3AA6NCI4 1184 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 TSPY3P0CV98 308 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 TSPY8P0CW00 308 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 ATP2B3Q16720 1220 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 NXNQ6DKJ4 435 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 LMBR1LQ6UX01 489 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 LARGE2Q8N3Y3 721 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 TRAF5O00463 557 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 RNF8O76064 485 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 IL15P40933 162 aaPredicted RBP10.95□□□□□ -0.66
COL4A6-210ENST00000621266 ATP8B2P98198 1209 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 LINS1Q8NG48 757 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 DCAF5Q96JK2 942 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 EYA1Q99502 592 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 HAUS7Q99871 368 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 TRIM6Q9C030 488 aaPredicted RBP10.95□□□□□ -0.66
COL4A6-210ENST00000621266 TRIM35Q9UPQ4 493 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 AFG3L2Q9Y4W6 797 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 MCMDC2Q4G0Z9 681 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 KRT79Q5XKE5 535 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 CRNKL1Q9BZJ0 848 aaKnown RBP10.95□□□□□ -0.66
COL4A6-210ENST00000621266 PIK3C2GO75747 1445 aa10.95□□□□□ -0.66
COL4A6-210ENST00000621266 UFL1O94874 794 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 ADKP55263 362 aaKnown RBP10.94□□□□□ -0.66
COL4A6-210ENST00000621266 ZNF445P59923 1031 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 HSP90AA5PQ58FG0 334 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 KCTD16Q68DU8 428 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 FAM71BQ8TC56 605 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 ARHGAP6O43182 974 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 RANBP1P43487 201 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 RAD51AP2Q09MP3 1159 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 TAF11Q15544 211 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 THEGQ9P2T0 379 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 IRS4O14654 1257 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-210ENST00000621266 CPA1P15085 419 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 HOXC9P31274 260 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 PROCA1Q8NCQ7 364 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-210ENST00000621266 SEPT10Q9P0V9 454 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 SLC4A4Q9Y6R1 1079 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 ZNF174Q15697 407 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 CCDC93Q567U6 631 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 UHMK1Q8TAS1 419 aaKnown RBP10.94□□□□□ -0.66
COL4A6-210ENST00000621266 PRPF31Q8WWY3 499 aaKnown RBP10.94□□□□□ -0.66
COL4A6-210ENST00000621266 IP6K1Q92551 441 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 TAB2Q9NYJ8 693 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 USTQ9Y2C2 406 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 TRPA1O75762 1119 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 DTHD1Q6ZMT9 781 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 CASC4Q6P4E1 433 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 CARD14Q9BXL6 1004 aa10.94□□□□□ -0.66
COL4A6-210ENST00000621266 DISP1Q96F81 1524 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 IL1RL1Q01638 556 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 BIRC2Q13490 618 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 CREB3L3Q68CJ9 461 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 HS2ST1Q7LGA3 356 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 IQUBQ8NA54 791 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 EYA3Q99504 573 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 GIPC1O14908 333 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 DNAJC8O75937 253 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-210ENST00000621266 BRD2P25440 801 aaKnown RBP10.93□□□□□ -0.66
COL4A6-210ENST00000621266 SLC9C1Q4G0N8 1177 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 BRAPQ7Z569 592 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 HAUS1Q96CS2 278 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 ZBTB21Q9ULJ3 1066 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.93□□□□□ -0.66
COL4A6-210ENST00000621266 TSC22D3Q99576 134 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 SCOCQ9UIL1 159 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 TRPC5Q9UL62 973 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-210ENST00000621266 SAR1BQ9Y6B6 198 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 CFAP74Q9C0B2 1584 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 MAP3K19Q56UN5 1328 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 RPS6KA1Q15418 735 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 TMTC1Q8IUR5 882 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 MSANTD4Q8NCY6 345 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 EPB41P11171 864 aaKnown RBP10.93□□□□□ -0.66
COL4A6-210ENST00000621266 PDE4DQ08499 809 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 LONRF2Q1L5Z9 754 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 INTS4Q96HW7 963 aaKnown RBP10.93□□□□□ -0.66
COL4A6-210ENST00000621266 DESI2Q9BSY9 194 aa10.93□□□□□ -0.66
COL4A6-210ENST00000621266 NLRP12P59046 1061 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms