RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 PAGR1Q9BTK6 254 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 INCENPQ9NQS7 918 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 TTF2Q9UNY4 1162 aaKnown RBP9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 CLRN2A0PK11 232 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 STAT6P42226 847 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 MCAMP43121 646 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 NLRP12P59046 1061 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 KRT40Q6A162 431 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 SDR42E1Q8WUS8 393 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 RBM17Q96I25 401 aaKnown RBP9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 GREM2Q9H772 168 aa9.35□□□□□ -0.91
PTPDC1-204ENST00000620992 TCP10L2B9ZVM9 353 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 H0YHG0 523 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 PDE8AO60658 829 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 CTNNA2P26232 953 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 UBASH3AP57075 661 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 RBM6P78332 1123 aaKnown RBP9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 PNOCQ13519 176 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 GPR101Q96P66 508 aaPredicted RBP9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 SPAG5Q96R06 1193 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 PRDM4Q9UKN5 801 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 ERVV-2B6SEH9 535 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 FANCCQ00597 558 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 DMTNQ08495 405 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 CCDC174Q6PII3 467 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 ZNF354CQ86Y25 554 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 CCDC150Q8NCX0 1101 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 CBFA2T2O43439 604 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 SLU7O95391 586 aaKnown RBP9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 CDR1P51861 262 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 GOLGA8FQ08AF8 430 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 GOLGA8DPQ0D2H9 430 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 TEX35Q5T0J7 233 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 EP400NLQ6ZTU2 488 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 ZNF397Q8NF99 534 aaPredicted RBP9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 SENP2Q9HC62 589 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 C6orf50Q9HD87 102 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 ATG3Q9NT62 314 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 NOD1Q9Y239 953 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 ZNF532Q9HCE3 1301 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 VWA3AA6NCI4 1184 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 FOXP2O15409 715 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 CFBP00751 764 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 CMA1P23946 247 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 NBPF11Q86T75 865 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 TBC1D10CQ8IV04 446 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 SMCR8Q8TEV9 937 aaPredicted RBP9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 OGFRQ9NZT2 677 aa9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 SRP68Q9UHB9 627 aaKnown RBP9.34□□□□□ -0.91
PTPDC1-204ENST00000620992 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 TRIM75PA6NK02 468 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 AKR1B10O60218 316 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 DLGAP5Q15398 846 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 ARMCX5Q6P1M9 558 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 CYB5R4Q7L1T6 521 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 CCDC102AQ96A19 550 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 EEF2KMTQ96G04 330 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 PICK1Q9NRD5 415 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 DNAI1Q9UI46 699 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 MROH7-TTC4A0A0A0MT08 1334 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 USP17L12C9JPN9 530 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 USP17L21D6R901 530 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 RAD17O75943 681 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 ZBTB7AO95365 584 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 TRIM21P19474 475 aaKnown RBP9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 BRINP3Q76B58 766 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 ANKRD2Q9GZV1 360 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 SCN11AQ9UI33 1791 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 UBE2Q2LH0YL09 131 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 SLC1A4P43007 532 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 SLC39A14Q15043 492 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 SPICE1Q8N0Z3 855 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 ZBTB38Q8NAP3 1195 aaPredicted RBP9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 ISCA1Q9BUE6 129 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 DBNDD1Q9H9R9 158 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 GOPCQ9HD26 462 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 IMPACTQ9P2X3 320 aa9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 SIPA1L3O60292 1781 aaPredicted RBP9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 PHRF1Q9P1Y6 1649 aaKnown RBP9.33□□□□□ -0.92
PTPDC1-204ENST00000620992 KIF2AO00139 706 aaPredicted RBP9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 POTEJP0CG39 1038 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 CDC27P30260 824 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 PHKA1P46020 1223 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 PUM3Q15397 648 aaKnown RBP9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 HLFQ16534 295 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 APOA5Q6Q788 366 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 NYAP1Q6ZVC0 841 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 PPP1R13BQ96KQ4 1090 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 PIH1D3Q9NQM4 214 aaKnown RBP9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 SEC31BQ9NQW1 1179 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 ZMYM6O95789 1325 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 PCCAP05165 728 aaPredicted RBP9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 PPARDQ03181 441 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 E4F1Q66K89 784 aaPredicted RBP9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 C2CD5Q86YS7 1000 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 NIM1KQ8IY84 436 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 ERO1AQ96HE7 468 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 BEGAINQ9BUH8 593 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 SYNCQ9H7C4 482 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms