RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 SETDB1Q15047 1291 aa11.69□□□□□ -0.54
VPS11-207ENST00000620429 NFXL1Q6ZNB6 911 aa11.69□□□□□ -0.54
VPS11-207ENST00000620429 CCDC13Q8IYE1 715 aa11.69□□□□□ -0.54
VPS11-207ENST00000620429 IFNL2Q8IZJ0 200 aa11.69□□□□□ -0.54
VPS11-207ENST00000620429 COG1Q8WTW3 980 aa11.69□□□□□ -0.54
VPS11-207ENST00000620429 MKL1Q969V6 931 aa11.69□□□□□ -0.54
VPS11-207ENST00000620429 KAZALD1Q96I82 304 aa11.69□□□□□ -0.54
VPS11-207ENST00000620429 NEK1Q96PY6 1258 aa11.69□□□□□ -0.54
VPS11-207ENST00000620429 RHOXF2Q9BQY4 288 aa11.69□□□□□ -0.54
VPS11-207ENST00000620429 SAMM50Q9Y512 469 aa11.69□□□□□ -0.54
VPS11-207ENST00000620429 IKBKBO14920 756 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 TAF5LO75529 589 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 ALDH1L1O75891 902 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 PEX19P40855 299 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 GNGT1P63211 74 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 SKOR1P84550 965 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 STIM1Q13586 685 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 NCAPG2Q86XI2 1143 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 VSTM4Q8IW00 320 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 XAGE3Q8WTP9 111 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 EDC3Q96F86 508 aaKnown RBP11.68□□□□□ -0.54
VPS11-207ENST00000620429 SUCLG2Q96I99 432 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 LRRC2Q9BYS8 371 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 RCOR1Q9UKL0 485 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 NDUFAB1O14561 156 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 IGKV5-2P06315 115 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 RBM12BQ8IXT5 1001 aaKnown RBP11.68□□□□□ -0.54
VPS11-207ENST00000620429 KIRREL3Q8IZU9 778 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 MMTAG2Q9BU76 263 aaKnown RBP11.68□□□□□ -0.54
VPS11-207ENST00000620429 EHD4Q9H223 541 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 PCDHGA4Q9Y5G9 962 aa11.68□□□□□ -0.54
VPS11-207ENST00000620429 SIPA1L3O60292 1781 aaPredicted RBP11.68□□□□□ -0.54
VPS11-207ENST00000620429 AGPSO00116 658 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 ADD1P35611 737 aaKnown RBP11.67□□□□□ -0.54
VPS11-207ENST00000620429 GGCXP38435 758 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 IFFO1Q0D2I5 559 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 WHAMMP3Q1A5X7 153 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 CYB5D1Q6P9G0 228 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 COPS6Q7L5N1 327 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 RIC3Q7Z5B4 369 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 MFN1Q8IWA4 741 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 FSIP1Q8NA03 581 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 ACTR5Q9H9F9 607 aaPredicted RBP11.67□□□□□ -0.54
VPS11-207ENST00000620429 LMCD1Q9NZU5 365 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 CPDO75976 1380 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 CTAGE15A4D2H0 777 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 PFKFB2O60825 505 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 CDKL5O76039 1030 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 CTAGE8P0CG41 777 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 PDHBP11177 359 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 ME1P48163 572 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 CAPRIN2Q6IMN6 1127 aaKnown RBP11.67□□□□□ -0.54
VPS11-207ENST00000620429 MIS18BP1Q6P0N0 1132 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 CTAGE6Q86UF2 777 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 CTAGE4Q8IX94 777 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 USP28Q96RU2 1077 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 OSBPL9Q96SU4 736 aa11.67□□□□□ -0.54
VPS11-207ENST00000620429 ENO4A6NNW6 628 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 ATP5JP18859 108 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 ABCD1P33897 745 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 NAP1L1P55209 391 aaKnown RBP11.66□□□□□ -0.54
VPS11-207ENST00000620429 DPCR1Q3MIW9 517 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 BARGINQ6ZT62 677 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 TOGARAM2Q6ZUX3 1019 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 FUKQ8N0W3 1084 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 LINS1Q8NG48 757 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 KLHDC4Q8TBB5 520 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 CENPHQ9H3R5 247 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 SLC39A2Q9NP94 309 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 PRDM11Q9NQV5 511 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 ADAMTS7Q9UKP4 1686 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 NUP188Q5SRE5 1749 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 GOLGA6L7A0A1B0GV03 622 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 ERICH2A1L162 156 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 GRM8O00222 908 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 SLMAPQ14BN4 828 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 MYSM1Q5VVJ2 828 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 RIN2Q8WYP3 895 aaPredicted RBP11.66□□□□□ -0.54
VPS11-207ENST00000620429 EZH1Q92800 747 aaPredicted RBP11.66□□□□□ -0.54
VPS11-207ENST00000620429 SDF4Q9BRK5 362 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 TPX2Q9ULW0 747 aaKnown RBP11.66□□□□□ -0.54
VPS11-207ENST00000620429 THRAP3Q9Y2W1 955 aaKnown RBP11.66□□□□□ -0.54
VPS11-207ENST00000620429 C5P01031 1676 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 MYO1BO43795 1136 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 SMNDC1O75940 238 aaKnown RBP eCLIP11.66□□□□□ -0.54
VPS11-207ENST00000620429 PYGLP06737 847 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 TOP1P11387 765 aaKnown RBP11.66□□□□□ -0.54
VPS11-207ENST00000620429 TBX2Q13207 712 aaPredicted RBP11.66□□□□□ -0.54
VPS11-207ENST00000620429 USPL1Q5W0Q7 1092 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 CWF19L1Q69YN2 538 aaKnown RBP11.66□□□□□ -0.54
VPS11-207ENST00000620429 FAM196AQ6ZSG2 479 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 DCAF5Q96JK2 942 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 MYD88Q99836 296 aa11.66□□□□□ -0.54
VPS11-207ENST00000620429 CORO1CQ9ULV4 474 aaPredicted RBP11.66□□□□□ -0.54
VPS11-207ENST00000620429 ABCC6O95255 1503 aa11.65□□□□□ -0.54
VPS11-207ENST00000620429 GOLGA8KD6RF30 607 aa11.65□□□□□ -0.54
VPS11-207ENST00000620429 LIN7AO14910 233 aaPredicted RBP11.65□□□□□ -0.54
VPS11-207ENST00000620429 CD151P48509 253 aa11.65□□□□□ -0.54
VPS11-207ENST00000620429 UBASH3AP57075 661 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms